Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0150
(543 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 0.66
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 2.0
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 2.0
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 23 2.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 23 2.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 23 2.7
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 23 2.7
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 3.5
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 22 4.6
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 6.1
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 6.1
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 6.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 6.1
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 8.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 8.1
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 24.6 bits (51), Expect = 0.66
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 141 NLFQNVFYKYNNVLKGY*SIFKKSYY 218
N + N + YNN Y + +KK YY
Sbjct: 328 NNYNNNYNNYNNYNNNYNNNYKKLYY 353
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 138 ANLFQNVFYKYNNVLKGY*SIFKKSYY 218
++L N Y NN K Y + +KK YY
Sbjct: 83 SSLSNNYNYNNNNYKKLYCNNYKKLYY 109
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.0 bits (47), Expect = 2.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = +3
Query: 138 ANLFQNVFYKYNNVLKGY*SIFKKSYY 218
++L N Y NN K Y + +KK YY
Sbjct: 83 SSLSNNYNYNNNNYKKLYCNNYKKLYY 109
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 540 LSHFNSKDAISICKFALSLYFVNHIAHHIRLFVSLSCFG 424
+ H + KD + FAL +Y + + +R + LSC G
Sbjct: 150 IMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 540 LSHFNSKDAISICKFALSLYFVNHIAHHIRLFVSLSCFG 424
+ H + KD + FAL +Y + + +R + LSC G
Sbjct: 150 IMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 540 LSHFNSKDAISICKFALSLYFVNHIAHHIRLFVSLSCFG 424
+ H + KD + FAL +Y + + +R + LSC G
Sbjct: 201 IMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 239
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -1
Query: 540 LSHFNSKDAISICKFALSLYFVNHIAHHIRLFVSLSCFG 424
+ H + KD + FAL +Y + + +R + LSC G
Sbjct: 150 IMHGDFKDPLIPVHFALRIYRNGTVNYLMRRHLILSCQG 188
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 22.2 bits (45), Expect = 3.5
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 501 KFALSLYFVNHIAHHIRLFVSLSCFGFYI 415
+FA Y+ + HH+R SC YI
Sbjct: 428 RFASGRYYSAYSLHHVRSSRESSCEQTYI 456
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.8 bits (44), Expect = 4.6
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 5/59 (8%)
Frame = +3
Query: 147 FQNVFYKYNNVLKGY*SIFKKSYYIPIYKKG-QC--VRDF--HNVSLLMAHCSNAYKSN 308
F+N+ KY + GY + +I +K QC V +N + A C N+ ++N
Sbjct: 112 FRNISEKYQEIFNGYFLNSESKDFIDFIQKNLQCCGVHSLSDYNDKPIPASCCNSPENN 170
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 133 VVPIYFKTYFINIIMC*KVISRSLKKVT 216
V+P + K F+ + C +SR KK+T
Sbjct: 290 VMPSWIKMLFLQWLPCLLRMSRPGKKIT 317
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 133 VVPIYFKTYFINIIMC*KVISRSLKKVT 216
V+P + K F+ + C +SR KK+T
Sbjct: 290 VMPSWIKMLFLQWLPCLLRMSRPGKKIT 317
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 133 VVPIYFKTYFINIIMC*KVISRSLKKVT 216
V+P + K F+ + C +SR KK+T
Sbjct: 290 VMPSWIKMLFLQWLPCLLRMSRPGKKIT 317
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 133 VVPIYFKTYFINIIMC*KVISRSLKKVT 216
V+P + K F+ + C +SR KK+T
Sbjct: 290 VMPSWIKMLFLQWLPCLLRMSRPGKKIT 317
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 133 VVPIYFKTYFINIIMC*KVISRSLKKVT 216
V+P + K F+ + C +SR KK+T
Sbjct: 290 VMPSWIKMLFLQWLPCLLRMSRPGKKIT 317
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 133 VVPIYFKTYFINIIMC*KVISRSLKKVT 216
V+P + K F+ + C +SR KK+T
Sbjct: 290 VMPSWIKMLFLQWLPCLLRMSRPGKKIT 317
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 327 NVNINNHYFYKH*NNEPSIMKRY 259
N N NN+Y + NN + K Y
Sbjct: 98 NNNYNNNYNNNYNNNYKKLYKNY 120
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 6.1
Identities = 9/23 (39%), Positives = 12/23 (52%)
Frame = -1
Query: 327 NVNINNHYFYKH*NNEPSIMKRY 259
N N NN+Y + NN + K Y
Sbjct: 98 NNNYNNNYNNNYNNNYKKLYKNY 120
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 133 VVPIYFKTYFINIIMC*KVISRSLKKVT 216
V+P + K F+ + C +SR KK+T
Sbjct: 358 VMPSWIKMLFLQWLPCLLRMSRPGKKIT 385
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 6.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 133 VVPIYFKTYFINIIMC*KVISRSLKKVT 216
V+P + K F+ + C +SR KK+T
Sbjct: 358 VMPSWIKMLFLQWLPCLLRMSRPGKKIT 385
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 315 NNHYFYKH*NNEPSIMKRYEN 253
+N+Y YK+ NN + K Y N
Sbjct: 306 SNNYNYKNYNNNYNSKKLYYN 326
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 8.1
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 315 NNHYFYKH*NNEPSIMKRYEN 253
+N+Y YK+ NN + K Y N
Sbjct: 317 SNNYNYKNYNNNYNSKKLYYN 337
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,684
Number of Sequences: 438
Number of extensions: 2890
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15459066
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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