Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0148
         (642 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77131-2|CAB00853.4|  444|Caenorhabditis elegans Hypothetical pr...    62   3e-10
Z46240-1|CAA86310.1|  444|Caenorhabditis elegans Hypothetical pr...    62   3e-10
Z92803-10|CAB07246.1|  449|Caenorhabditis elegans Hypothetical p...    62   4e-10
Z35597-5|CAA84648.1|  450|Caenorhabditis elegans Hypothetical pr...    62   4e-10
X15242-1|CAA33320.1|  441|Caenorhabditis elegans beta-tubulin pr...    60   1e-09
U70844-1|AAB09092.1|  441|Caenorhabditis elegans Mechanosensory ...    60   1e-09
Z78200-11|CAB01587.2|  426|Caenorhabditis elegans Hypothetical p...    41   7e-04
Z78198-13|CAB01575.2|  426|Caenorhabditis elegans Hypothetical p...    41   7e-04
AC006708-22|AAF60420.2|  335|Caenorhabditis elegans Hypothetical...    28   4.9  
AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine re...    27   8.6  

>Z77131-2|CAB00853.4|  444|Caenorhabditis elegans Hypothetical
           protein C54C6.2 protein.
          Length = 444

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +3

Query: 12  GMDEMEFTEAESNMNDLVSEYQQYQEAT 95
           GMDEMEFTEAESNMNDLVSEYQQYQEAT
Sbjct: 402 GMDEMEFTEAESNMNDLVSEYQQYQEAT 429


>Z46240-1|CAA86310.1|  444|Caenorhabditis elegans Hypothetical
           protein B0272.1 protein.
          Length = 444

 Score = 62.1 bits (144), Expect = 3e-10
 Identities = 28/28 (100%), Positives = 28/28 (100%)
 Frame = +3

Query: 12  GMDEMEFTEAESNMNDLVSEYQQYQEAT 95
           GMDEMEFTEAESNMNDLVSEYQQYQEAT
Sbjct: 402 GMDEMEFTEAESNMNDLVSEYQQYQEAT 429


>Z92803-10|CAB07246.1|  449|Caenorhabditis elegans Hypothetical
           protein K01G5.7 protein.
          Length = 449

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +3

Query: 12  GMDEMEFTEAESNMNDLVSEYQQYQEAT 95
           GMDEMEFTEAESNMNDL+SEYQQYQEAT
Sbjct: 402 GMDEMEFTEAESNMNDLISEYQQYQEAT 429


>Z35597-5|CAA84648.1|  450|Caenorhabditis elegans Hypothetical
           protein C36E8.5 protein.
          Length = 450

 Score = 61.7 bits (143), Expect = 4e-10
 Identities = 27/28 (96%), Positives = 28/28 (100%)
 Frame = +3

Query: 12  GMDEMEFTEAESNMNDLVSEYQQYQEAT 95
           GMDEMEFTEAESNMNDL+SEYQQYQEAT
Sbjct: 402 GMDEMEFTEAESNMNDLISEYQQYQEAT 429


>X15242-1|CAA33320.1|  441|Caenorhabditis elegans beta-tubulin
           protein.
          Length = 441

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +3

Query: 12  GMDEMEFTEAESNMNDLVSEYQQYQEA 92
           GMDEMEFTEAESNMNDLVSEYQQYQEA
Sbjct: 402 GMDEMEFTEAESNMNDLVSEYQQYQEA 428


>U70844-1|AAB09092.1|  441|Caenorhabditis elegans Mechanosensory
           abnormality protein7 protein.
          Length = 441

 Score = 60.1 bits (139), Expect = 1e-09
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +3

Query: 12  GMDEMEFTEAESNMNDLVSEYQQYQEA 92
           GMDEMEFTEAESNMNDLVSEYQQYQEA
Sbjct: 402 GMDEMEFTEAESNMNDLVSEYQQYQEA 428


>Z78200-11|CAB01587.2|  426|Caenorhabditis elegans Hypothetical
           protein T04H1.9 protein.
          Length = 426

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 16/29 (55%), Positives = 24/29 (82%)
 Frame = +3

Query: 3   HRRGMDEMEFTEAESNMNDLVSEYQQYQE 89
           H   M+E EFT+AE+ +NDL+SE+QQY++
Sbjct: 394 HWYTMEESEFTDAENKVNDLISEFQQYEK 422


>Z78198-13|CAB01575.2|  426|Caenorhabditis elegans Hypothetical
           protein T04H1.9 protein.
          Length = 426

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 16/29 (55%), Positives = 24/29 (82%)
 Frame = +3

Query: 3   HRRGMDEMEFTEAESNMNDLVSEYQQYQE 89
           H   M+E EFT+AE+ +NDL+SE+QQY++
Sbjct: 394 HWYTMEESEFTDAENKVNDLISEFQQYEK 422


>AC006708-22|AAF60420.2|  335|Caenorhabditis elegans Hypothetical
           protein Y110A7A.2 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 16/43 (37%), Positives = 22/43 (51%)
 Frame = +2

Query: 239 PIQCQVRHAF*LLTDSTTKLPVMTNYLNEHNLFNTFLDIPPGL 367
           P +C V   F +L+D   +L   T Y+NE      FL+ P GL
Sbjct: 232 PFRCDV--TFSILSDDKKELLTKTIYVNEMPEIQEFLERPEGL 272


>AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein37 protein.
          Length = 345

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 15/55 (27%), Positives = 27/55 (49%)
 Frame = -1

Query: 444 CFCCTYVNKKCLF*ISLYKFQI*LSTRPGGISRNVLNRLCSFK*FVITGSLVVLS 280
           CF C ++    +F I +Y FQ  +  +  G+ +N +  L  +K +VI   +   S
Sbjct: 59  CFTCEWLGN--VFLIDVYDFQPSILVKINGVLKNYIRPLNLYKVYVIVEGITETS 111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,268,070
Number of Sequences: 27780
Number of extensions: 266611
Number of successful extensions: 713
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1427403330
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)