Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0142
(641 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4; Ch... 150 3e-35
UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2; Br... 143 4e-33
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 134 1e-30
UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441; ... 134 2e-30
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 134 2e-30
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 133 4e-30
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 129 6e-29
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 128 9e-29
UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7; Ec... 128 1e-28
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 127 3e-28
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 125 8e-28
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 123 4e-27
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 121 1e-26
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 118 2e-25
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 117 3e-25
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 108 1e-22
UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1; Ch... 107 3e-22
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 106 4e-22
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 103 5e-21
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 102 6e-21
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 100 3e-20
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 97 6e-20
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 99 8e-20
UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1; ... 97 2e-19
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 97 2e-19
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 96 6e-19
UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2; En... 95 1e-18
UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2; To... 94 3e-18
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 94 3e-18
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 92 9e-18
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 91 3e-17
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 91 3e-17
UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 88 2e-16
UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 88 2e-16
UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1; Bl... 87 3e-16
UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17; B... 86 8e-16
UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5; P... 85 1e-15
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 85 1e-15
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 84 2e-15
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 84 3e-15
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 83 4e-15
UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacil... 83 4e-15
UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase polype... 83 7e-15
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 82 1e-14
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 81 3e-14
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 80 4e-14
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 79 7e-14
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 79 7e-14
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 79 7e-14
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 79 7e-14
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 79 9e-14
UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III ... 79 9e-14
UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium... 78 2e-13
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 77 4e-13
UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subuni... 75 1e-12
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 75 1e-12
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 75 1e-12
UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3; Proteobacter... 74 3e-12
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 74 3e-12
UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobac... 73 4e-12
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 73 4e-12
UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5; Sulfol... 71 2e-11
UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2; D... 71 3e-11
UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2; Acidobacteri... 70 6e-11
UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30; Proteobacte... 70 6e-11
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 69 7e-11
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 69 7e-11
UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2; Rh... 69 7e-11
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 69 1e-10
UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3; Rhodobacte... 68 2e-10
UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13; ... 68 2e-10
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 68 2e-10
UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit ... 67 3e-10
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 66 5e-10
UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48; O... 66 9e-10
UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15; Proteob... 65 1e-09
UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3; Ch... 64 4e-09
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 63 5e-09
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 62 8e-09
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 62 1e-08
UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Re... 62 1e-08
UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome ox... 60 3e-08
UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46; N... 60 6e-08
UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;... 56 1e-06
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 55 2e-06
UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21; Pro... 54 3e-06
UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71; P... 48 3e-04
UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1; Bu... 46 0.001
UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyc... 46 0.001
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 46 0.001
UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79; Pte... 45 0.001
UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39; Aph... 45 0.002
UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB - Ac... 44 0.002
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 43 0.005
UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820... 43 0.007
UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18; ... 42 0.017
UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 42 0.017
UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5; Euma... 40 0.039
UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14; Neo... 40 0.039
UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1; Ca... 40 0.039
UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit... 40 0.067
UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4; Tali... 38 0.21
UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 38 0.21
UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3; Py... 38 0.27
UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal ... 37 0.36
UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase, sub... 37 0.36
UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1; Ta... 37 0.48
UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol oxid... 36 0.63
UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1; Ja... 36 0.63
UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvi... 36 1.1
UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 36 1.1
UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1; Rhod... 36 1.1
UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21; A... 36 1.1
UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4; C... 35 1.9
UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum l... 35 1.9
UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8; Ba... 34 2.5
UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6; Di... 33 4.4
UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxida... 33 5.9
UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 7.7
>UniRef50_Q8LX70 Cluster: Cytochrome c oxidase subunit I; n=4;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus crystallinus (Phantom midge) (Tipula
crystallina)
Length = 207
Score = 150 bits (363), Expect = 3e-35
Identities = 70/82 (85%), Positives = 77/82 (93%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY+P++L LGFVFLFTVGGLTGV+LAN
Sbjct: 5 TRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYSPSLLWALGFVFLFTVGGLTGVVLAN 64
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
SS+DI LHDTYYVVAHFHYVLS
Sbjct: 65 SSLDIVLHDTYYVVAHFHYVLS 86
Score = 55.6 bits (128), Expect = 1e-06
Identities = 32/66 (48%), Positives = 38/66 (57%)
Frame = +3
Query: 258 ICNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRL 437
IC Y IY L+ FI K L KNSIF NI+ K+NIF TF S + ST+ LS L
Sbjct: 91 ICYYVSIYPLMPFINWVINKPLMIKNSIFNNIFSCKFNIFPPTFLSISRDASTMLWLSWL 150
Query: 438 IYFMKY 455
I +KY
Sbjct: 151 ILLLKY 156
>UniRef50_Q6TP93 Cluster: Cytochrome c oxidase subunit I; n=2;
Bruchidius|Rep: Cytochrome c oxidase subunit I -
Bruchidius aff. varius GLK-2003
Length = 339
Score = 143 bits (346), Expect = 4e-33
Identities = 69/82 (84%), Positives = 73/82 (89%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFTSAT+IIAVPTGIK+F LAT HGTQI Y+P L LGFVFLFTVGGLTGV+LAN
Sbjct: 214 TRAYFTSATMIIAVPTGIKVFSWLATFHGTQILYSPVTLWTLGFVFLFTVGGLTGVVLAN 273
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
SSIDI LHDTYYVVAHFHYVLS
Sbjct: 274 SSIDIVLHDTYYVVAHFHYVLS 295
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFF 378
VFAI+ G + +PLFTG++LN++ LKIQF +FIGVN+TFF
Sbjct: 299 VFAIMAGIVQWFPLFTGVTLNNFFLKIQFIIMFIGVNLTFF 339
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 134 bits (325), Expect = 1e-30
Identities = 59/82 (71%), Positives = 73/82 (89%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFTSAT+IIA+PTG+K+F LAT+HG+ + ++ +L LGF+FLFTVGGLTG++LAN
Sbjct: 301 TRAYFTSATMIIAIPTGVKVFSWLATLHGSNMKWSAAVLWALGFIFLFTVGGLTGIVLAN 360
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
SS+DI LHDTYYVVAHFHYVLS
Sbjct: 361 SSLDIVLHDTYYVVAHFHYVLS 382
Score = 95.1 bits (226), Expect = 1e-18
Identities = 41/60 (68%), Positives = 51/60 (85%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFAI+GGFI+ +PLF+G +L+ KI F +FIGVN+TFFPQHFLGL+G+PRRYSDYPD
Sbjct: 386 VFAIMGGFIHWFPLFSGYTLDQTYAKIHFTIMFIGVNLTFFPQHFLGLSGMPRRYSDYPD 445
>UniRef50_P29649 Cluster: Cytochrome c oxidase subunit 1; n=441;
Bilateria|Rep: Cytochrome c oxidase subunit 1 - Pantodon
buchholtzi (Butterflyfish)
Length = 184
Score = 134 bits (324), Expect = 2e-30
Identities = 61/82 (74%), Positives = 72/82 (87%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFTSAT+IIA+PTG+K+F LAT+HG I ++ +L LGF+FLFTVGGLTG+ILAN
Sbjct: 66 TRAYFTSATMIIAIPTGVKVFSWLATLHGGSIKWDTPMLWALGFIFLFTVGGLTGIILAN 125
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
SS+DI LHDTYYVVAHFHYVLS
Sbjct: 126 SSLDIVLHDTYYVVAHFHYVLS 147
Score = 37.9 bits (84), Expect = 0.21
Identities = 16/34 (47%), Positives = 26/34 (76%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFI 357
VFAI+GGF++ +PLF+G +L++ KI F +F+
Sbjct: 151 VFAIMGGFVHWFPLFSGYTLHNTWTKIHFGVMFM 184
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 134 bits (323), Expect = 2e-30
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++LAN
Sbjct: 301 TRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLAN 360
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
SSIDI LHDTYYVVAHFHYVLS
Sbjct: 361 SSIDIVLHDTYYVVAHFHYVLS 382
Score = 94.3 bits (224), Expect = 2e-18
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFAI+ GF++ +PLFTG +L+ KI F +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 386 VFAIMAGFVHWFPLFTGYTLHDTWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 133 bits (321), Expect = 4e-30
Identities = 60/82 (73%), Positives = 71/82 (86%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFTSAT+IIA+PTG+K+F LAT+HG I + +L LGF+FLFTVGGLTG++LAN
Sbjct: 301 TRAYFTSATMIIAIPTGVKVFSWLATLHGGAIKWETPMLWALGFIFLFTVGGLTGIVLAN 360
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
SS+DI LHDTYYVVAHFHYVLS
Sbjct: 361 SSLDIVLHDTYYVVAHFHYVLS 382
Score = 98.3 bits (234), Expect = 1e-19
Identities = 43/60 (71%), Positives = 51/60 (85%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFAI+ GF++ +PLFTG +LNS KI F +FIGVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 386 VFAIMAGFVHWFPLFTGYTLNSVWTKIHFGVMFIGVNLTFFPQHFLGLAGMPRRYSDYPD 445
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 129 bits (311), Expect = 6e-29
Identities = 58/82 (70%), Positives = 72/82 (87%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFT+AT+IIAVPTGIKIF LAT +G +++ P++L LGFVF+FT+GGL+GV+LAN
Sbjct: 301 TRAYFTAATLIIAVPTGIKIFSWLATCYGGSLHFIPSLLFALGFVFMFTIGGLSGVVLAN 360
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
+S+DI HDTYYVVAHFHYVLS
Sbjct: 361 ASLDIAFHDTYYVVAHFHYVLS 382
Score = 73.3 bits (172), Expect = 4e-12
Identities = 33/60 (55%), Positives = 39/60 (65%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFA+ G+ P GL N K F+ +F GVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 386 VFALFSGWYFWIPKILGLDYNLLYSKAHFWVLFTGVNLTFFPQHFLGLQGMPRRISDYPD 445
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 128 bits (310), Expect = 9e-29
Identities = 60/81 (74%), Positives = 69/81 (85%)
Frame = +2
Query: 5 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 184
RAYFTSAT+IIA+PTGIK F LAT G I ++P +L LGF+FLFTVGGLTG++LANS
Sbjct: 303 RAYFTSATMIIAIPTGIKAFSWLATXXGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANS 362
Query: 185 SIDITLHDTYYVVAHFHYVLS 247
S+DI LHDTYYVVAHFHYVLS
Sbjct: 363 SLDIALHDTYYVVAHFHYVLS 383
Score = 91.5 bits (217), Expect = 2e-17
Identities = 40/60 (66%), Positives = 48/60 (80%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFAI+ GF + +PLFTG +LN+ K F +F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 387 VFAILAGFTHWFPLFTGYTLNNAWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_Q85HI4 Cluster: Cytochrome c oxidase subunit I; n=7;
Echinoida|Rep: Cytochrome c oxidase subunit I -
Echinometra oblonga
Length = 386
Score = 128 bits (308), Expect = 1e-28
Identities = 57/82 (69%), Positives = 70/82 (85%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFT+AT+IIAVPTGIK+F +AT+ G+ + + + LGFVFLFT+GGLTG++LAN
Sbjct: 278 TRAYFTAATMIIAVPTGIKVFSWMATLQGSNLQWETPLFWALGFVFLFTLGGLTGIVLAN 337
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
SSID+ LHDTYYVVAHFHYVLS
Sbjct: 338 SSIDVVLHDTYYVVAHFHYVLS 359
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 127 bits (306), Expect = 3e-28
Identities = 58/82 (70%), Positives = 69/82 (84%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFT+AT+IIAVPTGIKIF +AT+ G I Y +L +GF+FLFT+GGLTG++LAN
Sbjct: 303 TRAYFTAATMIIAVPTGIKIFSWIATMWGGSIQYKTPMLFAVGFIFLFTIGGLTGIVLAN 362
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
S +DI LHDTYYVVAHFHYVLS
Sbjct: 363 SGLDIALHDTYYVVAHFHYVLS 384
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/60 (48%), Positives = 37/60 (61%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFA+ GF G + + +I F+ F GVN+TFFP HFLGL+G+PRR DYPD
Sbjct: 388 VFALFAGFYYWVGKIFGRTYPETLGQIHFWITFFGVNLTFFPMHFLGLSGMPRRIPDYPD 447
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 125 bits (302), Expect = 8e-28
Identities = 58/82 (70%), Positives = 69/82 (84%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFTSAT+IIA+PTGIKIF +AT G ++ N IL +GF+FLFTVGGLTGV+L+N
Sbjct: 285 TRAYFTSATMIIAIPTGIKIFSWMATFSGVKLMNNLMILWTMGFIFLFTVGGLTGVVLSN 344
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
SS+D+ LHDTYY VAHFHYVLS
Sbjct: 345 SSVDVVLHDTYYGVAHFHYVLS 366
Score = 98.3 bits (234), Expect = 1e-19
Identities = 41/60 (68%), Positives = 50/60 (83%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VF+I+GGFI +P+F GL +N Y LKI F+ FIGVN+ FFPQHFLGL+G+PRRYSDYPD
Sbjct: 370 VFSILGGFIYWFPMFFGLMMNEYFLKIHFYLTFIGVNLIFFPQHFLGLSGMPRRYSDYPD 429
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 123 bits (296), Expect = 4e-27
Identities = 57/82 (69%), Positives = 69/82 (84%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFT+AT+IIAVPTGIKIF +ATI I+ +L +GF+FLFT+GGLTG++LAN
Sbjct: 308 TRAYFTAATMIIAVPTGIKIFSWIATIWEGSIHLKTPMLFAIGFIFLFTIGGLTGIVLAN 367
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
S +DI+LHDTYYVVAHFHYVLS
Sbjct: 368 SGLDISLHDTYYVVAHFHYVLS 389
Score = 71.7 bits (168), Expect = 1e-11
Identities = 33/60 (55%), Positives = 40/60 (66%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFAI GF + TGL + +I F++ FIGVN+TF P HFLGLAG+PRR DYPD
Sbjct: 393 VFAIFAGFYYWFGKITGLQYPETLGQIHFWSTFIGVNLTFMPMHFLGLAGMPRRIPDYPD 452
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 121 bits (292), Expect = 1e-26
Identities = 58/84 (69%), Positives = 70/84 (83%), Gaps = 2/84 (2%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQIN--YNPNIL*RLGFVFLFTVGGLTGVIL 175
TRAYFT+AT+IIAVPTGIKIF LAT+ G+ N + + LGF+FLFT+GGLTG++L
Sbjct: 266 TRAYFTAATMIIAVPTGIKIFSWLATVSGSGRNLIFTTPMAWALGFIFLFTIGGLTGIVL 325
Query: 176 ANSSIDITLHDTYYVVAHFHYVLS 247
+NSS+DI LHDTYYVVAHFHYVLS
Sbjct: 326 SNSSLDILLHDTYYVVAHFHYVLS 349
Score = 79.8 bits (188), Expect = 5e-14
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFAI GGF + TG + I F+ +F+GVNITFFPQHFLGLAG+PRRY+DYPD
Sbjct: 353 VFAIFGGFYLWFGKITGYAYKDIYGLIHFWLMFLGVNITFFPQHFLGLAGLPRRYADYPD 412
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 118 bits (283), Expect = 2e-25
Identities = 53/82 (64%), Positives = 68/82 (82%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFT+AT+IIA+PTG+KIF LAT +G +++ +L LGFV +FT+GGL+GV+LAN
Sbjct: 327 TRAYFTAATLIIAIPTGVKIFSWLATCYGGSLHFTTPMLFALGFVVMFTIGGLSGVVLAN 386
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
+S +I HDTYYVVAHFHYVLS
Sbjct: 387 ASENIAFHDTYYVVAHFHYVLS 408
Score = 77.4 bits (182), Expect = 3e-13
Identities = 35/60 (58%), Positives = 43/60 (71%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFA+ G+ P GLS ++ KI F+ +FIGVN+TFFPQHFLGL G+PRR SDYPD
Sbjct: 412 VFALFSGWYFWIPKIIGLSYDTKASKIHFWILFIGVNLTFFPQHFLGLQGMPRRISDYPD 471
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 117 bits (281), Expect = 3e-25
Identities = 53/81 (65%), Positives = 66/81 (81%)
Frame = +2
Query: 5 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 184
+ YFT+AT++IAVPTGIKIF +ATI G I++ ++ LGF+FLFTVGG+TGV+LAN
Sbjct: 344 KMYFTAATMVIAVPTGIKIFSWIATIWGGSISFKTPMVWALGFIFLFTVGGVTGVVLANG 403
Query: 185 SIDITLHDTYYVVAHFHYVLS 247
+D LHDTYYVVAHFHYVLS
Sbjct: 404 GVDDVLHDTYYVVAHFHYVLS 424
Score = 71.3 bits (167), Expect = 2e-11
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VF + GF +P +G N ++ ++ F+ F GVN+ FFP HFLGL+G+PRRY DYP+
Sbjct: 428 VFGLFAGFYYWFPKMSGKMYNEFLGQLHFWVFFAGVNLLFFPMHFLGLSGMPRRYPDYPE 487
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 108 bits (259), Expect = 1e-22
Identities = 52/85 (61%), Positives = 66/85 (77%), Gaps = 3/85 (3%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY---NPNIL*RLGFVFLFTVGGLTGVI 172
TRAYFT+AT++IAVPTG+K+F LATI G + +P+ +G V LFT+GGLTGVI
Sbjct: 304 TRAYFTAATLMIAVPTGVKVFNWLATIFGGVYSLKHSHPSTFWAIGVVLLFTIGGLTGVI 363
Query: 173 LANSSIDITLHDTYYVVAHFHYVLS 247
LAN+++ LHD+YYVVAHFHYVLS
Sbjct: 364 LANAALSTLLHDSYYVVAHFHYVLS 388
Score = 74.1 bits (174), Expect = 3e-12
Identities = 32/60 (53%), Positives = 40/60 (66%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFAI GGF +P +TG+ ++ F FIGVN TFFP H++GL G+PRRY DYPD
Sbjct: 392 VFAIFGGFWFWFPFWTGMVPRKDLVLTHFMLTFIGVNFTFFPMHWMGLTGMPRRYQDYPD 451
>UniRef50_Q8LX74 Cluster: Cytochrome c oxidase subunit I; n=1;
Chaoborus punctipennis|Rep: Cytochrome c oxidase subunit
I - Chaoborus punctipennis
Length = 205
Score = 107 bits (256), Expect = 3e-22
Identities = 70/155 (45%), Positives = 87/155 (56%), Gaps = 4/155 (2%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFTSAT+IIAVPTGIKIF LAT+HGTQINY P++L LGFVFLFTVGG +N
Sbjct: 4 TRAYFTSATMIIAVPTGIKIFSWLATLHGTQINYTPSLLWALGFVFLFTVGGPN---WSN 60
Query: 182 SSIDITLH--DTYYVVAHFHYVLSXXXXXXXXXXXXXXXXXXXAFH*ILIY--*KFNFLQ 349
S+ I + Y+++ +++ +L+ KFN
Sbjct: 61 FSLFINWYCSSRYHIMLLLIFIMFFQLGLYLLLYQDSFIDTHYLQDFLLMQNDLKFNLQL 120
Query: 350 YLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI 454
Y LE I HF HNIF EYLDDIQI + E+
Sbjct: 121 YFLELILHFSHNIFLDLPEYLDDIQIFLMDLIVEM 155
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 106 bits (255), Expect = 4e-22
Identities = 49/83 (59%), Positives = 65/83 (78%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQI-NYNPNIL*RLGFVFLFTVGGLTGVILA 178
T+AYFT+AT++IA+PTGIK+F +AT+ G I Y P GFV LFT+GG+TG+IL+
Sbjct: 304 TKAYFTAATMVIAIPTGIKVFNWIATMWGGSIWMYTPMYF-AAGFVVLFTIGGITGIILS 362
Query: 179 NSSIDITLHDTYYVVAHFHYVLS 247
N+ ID ++HDT+YVV HFHYVLS
Sbjct: 363 NAGIDTSIHDTHYVVGHFHYVLS 385
Score = 70.9 bits (166), Expect = 2e-11
Identities = 33/60 (55%), Positives = 39/60 (65%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFAI GGF + TGLS + + + F+ FIGVN TFFP HFLG G+PRR DYPD
Sbjct: 389 VFAIYGGFYYWWGKMTGLSYSESLGQAHFWMTFIGVNFTFFPMHFLGSGGMPRRIPDYPD 448
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 103 bits (246), Expect = 5e-21
Identities = 47/82 (57%), Positives = 60/82 (73%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TR YF++AT+IIA+P+ +KIF L T G+ P F+FLFTVGGL+G+IL+
Sbjct: 311 TRTYFSAATMIIAIPSAVKIFNWLGTFFGSNQKMQPLWCWTYSFIFLFTVGGLSGIILSA 370
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
+S+DI LHDTYYVVAHFHY LS
Sbjct: 371 ASLDIILHDTYYVVAHFHYTLS 392
Score = 62.5 bits (145), Expect = 8e-09
Identities = 26/60 (43%), Positives = 36/60 (60%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
++ I GF P G+S +S ++ F F+G N+TFFP HF GL G+PR+ DYPD
Sbjct: 396 IYGIFCGFCLWLPYMYGISFDSVMMMAVFVCFFVGTNMTFFPMHFAGLQGMPRKILDYPD 455
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 102 bits (245), Expect = 6e-21
Identities = 46/81 (56%), Positives = 62/81 (76%)
Frame = +2
Query: 5 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 184
+AYF AT++IAVPTGIKIF +AT+ I++ ++ LGF+FLFT+GG TG+IL+ +
Sbjct: 407 QAYFMVATMVIAVPTGIKIFSWIATMWMGSISFKTPMMFALGFIFLFTLGGTTGIILSQA 466
Query: 185 SIDITLHDTYYVVAHFHYVLS 247
+D HDTYYVVAHFHYV+S
Sbjct: 467 GVDRAYHDTYYVVAHFHYVMS 487
Score = 61.3 bits (142), Expect = 2e-08
Identities = 24/35 (68%), Positives = 28/35 (80%)
Frame = +1
Query: 331 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
++ F+ FIG NITFFPQHFLG G+PRRY DYPD
Sbjct: 516 QVHFWVFFIGTNITFFPQHFLGRQGMPRRYIDYPD 550
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 100 bits (239), Expect = 3e-20
Identities = 44/59 (74%), Positives = 52/59 (88%)
Frame = +2
Query: 71 LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 247
LAT+HG I ++P +L LGF+FLFTVGGLTG++LANSS+DI LHDTYYVVAHFHYVLS
Sbjct: 325 LATLHGGTIKWDPPMLWALGFIFLFTVGGLTGIVLANSSLDIALHDTYYVVAHFHYVLS 383
Score = 92.7 bits (220), Expect = 7e-18
Identities = 41/60 (68%), Positives = 48/60 (80%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFAI+ GF + +PLFTG +LNS K F +F GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 387 VFAILAGFTHWFPLFTGYTLNSAWAKAHFGVMFTGVNLTFFPQHFLGLAGMPRRYSDYPD 446
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 96.7 bits (230), Expect(2) = 6e-20
Identities = 53/89 (59%), Positives = 62/89 (69%), Gaps = 14/89 (15%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGL------- 160
TRAYFT+AT+IIAVPTGIKIF LAT +G I P +L LGFVFLFT+GGL
Sbjct: 360 TRAYFTAATLIIAVPTGIKIFSWLATCYGGSIKMTPVMLFSLGFVFLFTIGGLLNHLLWK 419
Query: 161 -------TGVILANSSIDITLHDTYYVVA 226
+GV+LAN+S+DI HDTYYVVA
Sbjct: 420 INKFRFVSGVVLANASLDIAFHDTYYVVA 448
Score = 73.7 bits (173), Expect = 3e-12
Identities = 33/60 (55%), Positives = 42/60 (70%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFA+ G+ P G + + + K+QF+ +FIGVN TFFPQHFLGL G+PRR SDYPD
Sbjct: 493 VFAMFAGWYFWSPKMLGFNYDLNLAKMQFWLLFIGVNATFFPQHFLGLQGMPRRISDYPD 552
Score = 23.4 bits (48), Expect(2) = 6e-20
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +2
Query: 206 DTYYVVAHFHYVLS 247
+T + HFHYVLS
Sbjct: 476 ETMLFIVHFHYVLS 489
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 99.1 bits (236), Expect = 8e-20
Identities = 44/75 (58%), Positives = 60/75 (80%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
+RAYF+ A++IIA+PTG KIF LATI+G + + +L +GF+ LFT+GG+TGV++AN
Sbjct: 318 SRAYFSGASLIIAIPTGSKIFSWLATIYGGTLRWTTPLLYAVGFIVLFTIGGVTGVVIAN 377
Query: 182 SSIDITLHDTYYVVA 226
SS+DI HDTYYVVA
Sbjct: 378 SSLDIMFHDTYYVVA 392
>UniRef50_Q4XXN6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 329
Score = 97.5 bits (232), Expect = 2e-19
Identities = 47/84 (55%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQ--INYNPNIL*RLGFVFLFTVGGLTGVIL 175
TRA+FTS TI+I++PTG K+F L T T I ++ ++L L F+ FT GG TGVIL
Sbjct: 10 TRAFFTSTTILISIPTGTKVFNWLCTYMSTNFGITHSSSLL-SLLFICTFTFGGTTGVIL 68
Query: 176 ANSSIDITLHDTYYVVAHFHYVLS 247
N +ID+ LHDTYYV+AHFH+VLS
Sbjct: 69 GNGAIDVALHDTYYVIAHFHFVLS 92
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +1
Query: 298 FTGLSLN-SYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
F G +L + I+ + F+GV +TF P HFLG +PRR DYPD
Sbjct: 110 FFGKTLRENTIIVLWSILFFVGVVLTFLPMHFLGFNVMPRRIPDYPD 156
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 97.5 bits (232), Expect = 2e-19
Identities = 46/72 (63%), Positives = 57/72 (79%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFT+AT+IIAVPTGIKIF LAT++G + +L LGF+ LFT+GGLTGVILAN
Sbjct: 300 TRAYFTAATMIIAVPTGIKIFSWLATLYGGSLRITTPMLFALGFIALFTIGGLTGVILAN 359
Query: 182 SSIDITLHDTYY 217
+S+D+ LHD Y
Sbjct: 360 ASLDVALHDLKY 371
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 96.3 bits (229), Expect = 6e-19
Identities = 45/83 (54%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGLTGVILA 178
TRAYFTS TI+I++PTG K+F + T + + + L L F+ FT GG TGVIL
Sbjct: 306 TRAYFTSTTILISIPTGTKVFNWICTYMSSNFGMIHSSSLLSLLFICTFTFGGTTGVILG 365
Query: 179 NSSIDITLHDTYYVVAHFHYVLS 247
N++ID+ LHDTYYV+AHFH+VLS
Sbjct: 366 NAAIDVALHDTYYVIAHFHFVLS 388
Score = 43.2 bits (97), Expect = 0.005
Identities = 17/28 (60%), Positives = 20/28 (71%)
Frame = +1
Query: 352 FIGVNITFFPQHFLGLAGIPRRYSDYPD 435
F+GV +TF P HFLG +PRR DYPD
Sbjct: 425 FVGVILTFLPMHFLGFNVMPRRIPDYPD 452
>UniRef50_Q6XYE8 Cluster: Cytochrome c oxidase subunit I; n=2;
Endopterygota|Rep: Cytochrome c oxidase subunit I -
Copitarsia incommoda
Length = 150
Score = 95.1 bits (226), Expect = 1e-18
Identities = 46/54 (85%), Positives = 49/54 (90%)
Frame = +2
Query: 11 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVI 172
YFTSAT+IIAVPTGIKIF LAT HGTQINY+P+IL LGFVFLFTVGGLTGVI
Sbjct: 97 YFTSATMIIAVPTGIKIFSWLATFHGTQINYSPSILWSLGFVFLFTVGGLTGVI 150
>UniRef50_Q9TAP9 Cluster: Cytochrome c oxidase subunit I; n=2;
Toxoplasma gondii|Rep: Cytochrome c oxidase subunit I -
Toxoplasma gondii
Length = 192
Score = 93.9 bits (223), Expect = 3e-18
Identities = 44/83 (53%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNP-NIL*RLGFVFLFTVGGLTGVILA 178
TRAYF++ TI+IA+PTG KIF L T + ++ L F+ LFT+GG TGV++
Sbjct: 14 TRAYFSAMTIMIAIPTGTKIFNWLGTYMASHNTTRTIDLWAALCFILLFTLGGTTGVVMG 73
Query: 179 NSSIDITLHDTYYVVAHFHYVLS 247
N+ +DI LHDTYY+VAHFH+VLS
Sbjct: 74 NAGMDIALHDTYYIVAHFHFVLS 96
Score = 37.9 bits (84), Expect = 0.21
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = +1
Query: 265 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
+ G +N + + TG +S L I F + + F P H LG +PRR DYPD
Sbjct: 114 MFGDTLNLFHVNTG---SSPYLNIWFVVFLASIMLIFLPMHILGFNVMPRRIPDYPD 167
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 93.9 bits (223), Expect = 3e-18
Identities = 44/69 (63%), Positives = 55/69 (79%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TRAYFTSAT+IIA+PTGIKIF LATI+G I ++ + F+FLFTVGGLTGV+LAN
Sbjct: 301 TRAYFTSATMIIAIPTGIKIFSWLATIYGGSIRLAVPMMFAIAFLFLFTVGGLTGVVLAN 360
Query: 182 SSIDITLHD 208
+S+D+ HD
Sbjct: 361 ASLDVAFHD 369
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 92.3 bits (219), Expect = 9e-18
Identities = 44/83 (53%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINY-NPNIL*RLGFVFLFTVGGLTGVILA 178
T +F+S T+II VPTGIK+F L ++ + +P + +GF+FLFTVGG+TGV L+
Sbjct: 391 TGVFFSSITMIIGVPTGIKVFSWLYMLNSCGMRVLDPIVWWLVGFIFLFTVGGVTGVALS 450
Query: 179 NSSIDITLHDTYYVVAHFHYVLS 247
S++DI HDT++VVAHFHYVLS
Sbjct: 451 ASALDILFHDTWFVVAHFHYVLS 473
Score = 53.6 bits (123), Expect = 4e-06
Identities = 21/47 (44%), Positives = 30/47 (63%)
Frame = +1
Query: 289 YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
+P G SLN Y+L+ + +G N+ FFP H+LG+ G+PRR S Y
Sbjct: 488 WPFIVGYSLNKYLLQGHWLLSMVGFNLCFFPMHYLGIHGLPRRVSCY 534
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 90.6 bits (215), Expect = 3e-17
Identities = 43/83 (51%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILA 178
TR+YFT+AT+IIAVPTGIKIF L+++ + + N ++ F+ F +GG +G+IL+
Sbjct: 284 TRSYFTAATMIIAVPTGIKIFTWLSSLLTMKRMTLNSLTFLQVSFIVSFAIGGTSGIILS 343
Query: 179 NSSIDITLHDTYYVVAHFHYVLS 247
N+S+D LHDTYYVVAHFH V++
Sbjct: 344 NASVDHYLHDTYYVVAHFHIVVA 366
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/80 (52%), Positives = 56/80 (70%)
Frame = +2
Query: 5 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 184
R +F + T++IAVPTGIKIF T+ G +I N +L GF+ F +GGLTGV++A+
Sbjct: 312 RMFFMATTMLIAVPTGIKIFSWCGTLWGGKIQLNSAMLFAFGFLSSFMIGGLTGVMVASV 371
Query: 185 SIDITLHDTYYVVAHFHYVL 244
DI +HDTY+VV HFHYVL
Sbjct: 372 PFDIHVHDTYFVVGHFHYVL 391
Score = 51.6 bits (118), Expect = 2e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Frame = +1
Query: 259 FAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
FA+ G + +P TG +N + ++ F FIG+N+TF P H LGL G+ RR + Y
Sbjct: 397 FALFSGVYHWFPKMTGRMVNEPLGRLHFILTFIGMNLTFMPMHELGLMGMNRRIALY 453
>UniRef50_Q9XLV8 Cluster: Cytochrome c oxidase subunit I; n=1;
Diplonema papillatum|Rep: Cytochrome c oxidase subunit I
- Diplonema papillatum
Length = 287
Score = 87.8 bits (208), Expect = 2e-16
Identities = 39/82 (47%), Positives = 59/82 (71%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TR YF+SAT++IA+PT IK+F + + + + + F+ +F +GG+TG++LAN
Sbjct: 58 TRVYFSSATLLIALPTSIKVFSWMVGLRRMALASSAAWY-VVAFLLMFLLGGVTGLVLAN 116
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
S +D+ +HD+YYVVAHFHYVLS
Sbjct: 117 SEVDLVMHDSYYVVAHFHYVLS 138
Score = 42.3 bits (95), Expect = 0.010
Identities = 18/60 (30%), Positives = 32/60 (53%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VF ++ G ++ + L +G +++L++Q + G F+ H G G+PRR D PD
Sbjct: 142 VFGLLNGVLSCHELCSGYRSAAWLLRVQVVLLVWGTTCIFWGMHLSGTLGLPRRVPDAPD 201
>UniRef50_P24010 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Caa-3605 subunit 1) (Oxidase
aa(3) subunit 1); n=13; Bacillaceae|Rep: Cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Cytochrome c oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Caa-3605
subunit 1) (Oxidase aa(3) subunit 1) - Bacillus subtilis
Length = 622
Score = 87.8 bits (208), Expect = 2e-16
Identities = 41/79 (51%), Positives = 54/79 (68%)
Frame = +2
Query: 8 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 187
A F AT+ IA+PTGIKIF L TI G + Y +L + F+ F +GG+TGV+LA ++
Sbjct: 311 AIFAVATMAIAIPTGIKIFNWLLTIWGGNVKYTTAMLYAVSFIPSFVLGGVTGVMLAAAA 370
Query: 188 IDITLHDTYYVVAHFHYVL 244
D HDTY+VVAHFHYV+
Sbjct: 371 ADYQFHDTYFVVAHFHYVI 389
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/54 (44%), Positives = 33/54 (61%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR 417
VF ++ G +P G L+ + KI F FIG ++TFF QHF+GL G+PRR
Sbjct: 394 VFGLLAGVHFWWPKMFGKILHETMGKISFVLFFIGFHLTFFIQHFVGLMGMPRR 447
>UniRef50_A3ZTG1 Cluster: Cytochrome c oxidase subunit I; n=1;
Blastopirellula marina DSM 3645|Rep: Cytochrome c
oxidase subunit I - Blastopirellula marina DSM 3645
Length = 595
Score = 87.4 bits (207), Expect = 3e-16
Identities = 35/77 (45%), Positives = 56/77 (72%)
Frame = +2
Query: 14 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 193
F AT++IA+P+ +K F L T++G ++ + +L L FV +F +GGL+G+ +A + +D
Sbjct: 353 FMVATMMIALPSAVKTFNWLGTVYGGKVQFTTPMLFALSFVSMFVIGGLSGIFMAATPVD 412
Query: 194 ITLHDTYYVVAHFHYVL 244
I +HDTY++VAHFHYVL
Sbjct: 413 IVIHDTYFIVAHFHYVL 429
Score = 44.4 bits (100), Expect = 0.002
Identities = 22/55 (40%), Positives = 28/55 (50%)
Frame = +1
Query: 262 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 426
A+ G +P G +N KI F FI +N TFF H LG+ G PRR +D
Sbjct: 436 AVFGSIYFWFPKMFGRMMNETAGKIHFALTFIFLNGTFFTMHILGVGGFPRRLAD 490
>UniRef50_Q67ML1 Cluster: Cytochrome C oxidase subunit I; n=17;
Bacteria|Rep: Cytochrome C oxidase subunit I -
Symbiobacterium thermophilum
Length = 628
Score = 85.8 bits (203), Expect = 8e-16
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +2
Query: 14 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 193
F+ T+ IAVPTG+KIF L+T+ G QI + +L +GF+ FT+GGL+G + A + D
Sbjct: 324 FSLTTMAIAVPTGVKIFNWLSTMWGGQIRFTAAMLFAIGFIASFTIGGLSGFMHAAAPSD 383
Query: 194 ITLHDTYYVVAHFHYVL 244
HDTY+VVAHFHYVL
Sbjct: 384 AQQHDTYFVVAHFHYVL 400
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/62 (37%), Positives = 32/62 (51%)
Frame = +1
Query: 244 INRRVFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYS 423
I +FAI+ G + +P G L+ + + F IF G + FP H LGL G+PRR
Sbjct: 401 IGGSIFAILSGIHHWFPKVFGRMLDERLGRWSFALIFTGFHTFAFPFHILGLLGMPRRIY 460
Query: 424 DY 429
Y
Sbjct: 461 TY 462
>UniRef50_Q11EK8 Cluster: Cytochrome c oxidase, subunit I; n=5;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Mesorhizobium sp. (strain BNC1)
Length = 845
Score = 85.0 bits (201), Expect = 1e-15
Identities = 39/81 (48%), Positives = 62/81 (76%), Gaps = 3/81 (3%)
Frame = +2
Query: 11 YFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFTVGGLTGVILAN 181
+F++A++ +A+P+GI++F +ATI ++ + P++ LGF+F+FTVGG+TGV++A
Sbjct: 329 FFSAASMAVAIPSGIQVFSWIATIASSKERFRITTPSLF-VLGFLFIFTVGGVTGVMVAL 387
Query: 182 SSIDITLHDTYYVVAHFHYVL 244
ID +HDTY+VVAHFHYVL
Sbjct: 388 VPIDFQVHDTYFVVAHFHYVL 408
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/64 (40%), Positives = 35/64 (54%)
Frame = +1
Query: 244 INRRVFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYS 423
I VF + F P F+ L+ + + F+ +FIG N+TFFP H GL G+PRR
Sbjct: 409 IGGMVFPLFATFYYWIPAFSRNMLSERLGRWVFWLMFIGFNVTFFPMHMAGLLGMPRRVR 468
Query: 424 DYPD 435
YPD
Sbjct: 469 TYPD 472
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 85.0 bits (201), Expect = 1e-15
Identities = 38/79 (48%), Positives = 57/79 (72%)
Frame = +2
Query: 8 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 187
A+F +A+ +IAVPTG+KIF LAT+ +N ++L +GF+ +F +GG++GV LA+
Sbjct: 320 AFFGAASFLIAVPTGVKIFNWLATMWQGSLNLTTSMLYAIGFISMFIIGGISGVTLASPP 379
Query: 188 IDITLHDTYYVVAHFHYVL 244
I++ D+YYVVAH HYVL
Sbjct: 380 INVQQTDSYYVVAHMHYVL 398
Score = 48.4 bits (110), Expect = 1e-04
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = +1
Query: 265 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
I G +P TG L+ + K QF+ + I N+TFFP H G AG+PRR Y
Sbjct: 406 IFAGIFYWFPKMTGRMLDERLGKWQFWLMLISFNLTFFPMHLSGNAGMPRRIYTY 460
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 84.2 bits (199), Expect = 2e-15
Identities = 37/78 (47%), Positives = 54/78 (69%)
Frame = +2
Query: 11 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 190
+F +++IA+PTGIK+F AT+ G +I +N ++ + F+ F +GGLTG++ A I
Sbjct: 322 FFAVGSLLIAIPTGIKVFNWTATLWGGEIQFNTSLHFAVAFLLQFVIGGLTGIMFAAVPI 381
Query: 191 DITLHDTYYVVAHFHYVL 244
D L DTY+VVAHFHYVL
Sbjct: 382 DWQLTDTYFVVAHFHYVL 399
Score = 54.0 bits (124), Expect = 3e-06
Identities = 27/60 (45%), Positives = 34/60 (56%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFA+ +P TG LN I +QF+ +G N+TF QHFLGL G+PRR Y D
Sbjct: 404 VFALFSAAYYWFPKMTGRMLNERIGILQFWLWVLGFNMTFMVQHFLGLMGMPRRVYTYAD 463
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 83.8 bits (198), Expect = 3e-15
Identities = 38/79 (48%), Positives = 57/79 (72%)
Frame = +2
Query: 8 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 187
++FT++++ IAVP G++IF LATI + + L +GF+ +F +GGLTGV++A+
Sbjct: 318 SFFTASSMAIAVPAGLQIFCWLATIWAGRPIFKTPFLFVIGFIVVFVIGGLTGVMVASVP 377
Query: 188 IDITLHDTYYVVAHFHYVL 244
D +HDTY+VVAHFHYVL
Sbjct: 378 FDTQVHDTYFVVAHFHYVL 396
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
VF ++G +P TG ++ + + F IF G N+TFFP H LGL G+PRR Y
Sbjct: 401 VFPLLGAIYYWFPKLTGRMMSETLGRWSFGLIFSGFNLTFFPMHILGLQGMPRRIYTY 458
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 83.4 bits (197), Expect = 4e-15
Identities = 39/81 (48%), Positives = 56/81 (69%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TR F+ T++IAVPTGIKIF + T++ I++ +L LG VF+F +GGLTG+ L
Sbjct: 256 TRVLFSYTTLLIAVPTGIKIFNWMLTLYRGAIHFRSQMLYALGGVFMFLIGGLTGLPLGM 315
Query: 182 SSIDITLHDTYYVVAHFHYVL 244
+ID+ + D+ +VV HFHYVL
Sbjct: 316 VAIDLGVSDSLFVVGHFHYVL 336
Score = 52.4 bits (120), Expect = 9e-06
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = +1
Query: 265 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 432
I+G I+ +PL TG + K+ F+ IF G NI +F Q G+ G PRRY DYP
Sbjct: 344 ILGAVIHWFPLATGKYYPENLGKLSFWLIFAGANIFYFLQMVAGMLGNPRRYPDYP 399
>UniRef50_Q1H1C1 Cluster: Cytochrome-c oxidase; n=1; Methylobacillus
flagellatus KT|Rep: Cytochrome-c oxidase -
Methylobacillus flagellatus (strain KT / ATCC 51484 /
DSM 6875)
Length = 631
Score = 83.4 bits (197), Expect = 4e-15
Identities = 36/78 (46%), Positives = 58/78 (74%)
Frame = +2
Query: 11 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 190
+FT+++ +IA+P+G++IF +AT+ G++ +L LGF +F +GGL+GV++A+
Sbjct: 325 FFTASSAMIAIPSGVQIFCWIATLWGSKPKLATPLLHVLGFFLIFIIGGLSGVMVASVPF 384
Query: 191 DITLHDTYYVVAHFHYVL 244
D+ HDTY+VVAHFHYVL
Sbjct: 385 DMQAHDTYFVVAHFHYVL 402
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/64 (45%), Positives = 38/64 (59%)
Frame = +1
Query: 244 INRRVFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYS 423
I VF ++GG YP FTG ++ + K+ F+ F G N+TFFP H LGL G+PRR
Sbjct: 403 IGGAVFPLLGGLYYWYPKFTGRMMSERLGKVAFWVTFAGFNLTFFPMHKLGLEGMPRRVY 462
Query: 424 DYPD 435
Y D
Sbjct: 463 TYLD 466
>UniRef50_A1ZL77 Cluster: Alternative Cytochrome c oxidase
polypeptide I (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=20; cellular organisms|Rep: Alternative
Cytochrome c oxidase polypeptide I (Cytochrome BB3
subunit 1) (Oxidase BB(3) subunit 1) - Microscilla
marina ATCC 23134
Length = 635
Score = 82.6 bits (195), Expect = 7e-15
Identities = 37/77 (48%), Positives = 53/77 (68%)
Frame = +2
Query: 14 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 193
F T+IIAVP+ +K F + T+ I + P ++ +G V +F GG+TG+IL N+++D
Sbjct: 366 FMFLTLIIAVPSAVKSFNYITTLWRGNIIFTPAMMFSIGLVSMFISGGVTGIILGNNAMD 425
Query: 194 ITLHDTYYVVAHFHYVL 244
I LHDTYYVVAHFH V+
Sbjct: 426 IQLHDTYYVVAHFHLVM 442
Score = 49.2 bits (112), Expect = 8e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = +1
Query: 259 FAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRY 420
F ++ G + +P G ++ + I F+ F+G + FFP H++G+AG PRRY
Sbjct: 448 FGMMAGVYHWFPKMFGRMMDEKLGYIHFWFTFVGAYLVFFPMHYIGIAGFPRRY 501
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 82.2 bits (194), Expect = 1e-14
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Frame = +2
Query: 11 YFTSATIIIAVPTGIKIFR*LATIHGTQ-INYNPNIL*RLGFVFLFTVGGLTGVILANSS 187
YFT+ TI+IA+PTG KIF + T+ + I +L + F+ F +GG TGV+L N+
Sbjct: 309 YFTTVTILIALPTGNKIFNWVTTLQCVESIKSLGLVLFTVLFIVNFVIGGTTGVVLGNAG 368
Query: 188 IDITLHDTYYVVAHFHYVLS 247
ID+ LHDT YVV HFH+VLS
Sbjct: 369 IDLALHDTVYVVGHFHFVLS 388
Score = 40.3 bits (90), Expect = 0.039
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +1
Query: 295 LFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
L G+ L++ + + I V +TF P HF G + +PRR DYPD
Sbjct: 406 LLFGIILSNRLSSLIAPIFMISVLLTFLPMHFTGFSPLPRRIPDYPD 452
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 80.6 bits (190), Expect = 3e-14
Identities = 34/74 (45%), Positives = 53/74 (71%)
Frame = +2
Query: 26 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 205
T++I++P G+ + + T++G I++ +L LGF+FLF +GGLTGV LA S+ + L
Sbjct: 309 TVLISIPVGLMVIGLVGTLYGGSISFETPMLYALGFIFLFLIGGLTGVPLALVSLTVHLS 368
Query: 206 DTYYVVAHFHYVLS 247
+TYYVV HFHYV++
Sbjct: 369 ETYYVVGHFHYVMA 382
Score = 52.8 bits (121), Expect = 7e-06
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = +1
Query: 259 FAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
FAI GG +P TG N I K F+ F+GVNI F+ +G+ G+PRRY DY
Sbjct: 387 FAIFGGVYYIFPKMTGKMYNETIGKWAFWITFVGVNIVFWIMMDIGVEGMPRRYYDY 443
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 80.2 bits (189), Expect = 4e-14
Identities = 36/82 (43%), Positives = 54/82 (65%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
+RAYF +I+I +PT +K+F + + T + + + F+F+F +G +TG+ L+N
Sbjct: 303 SRAYFGGVSILIGLPTCVKLFNWIYSFLYTDMIITFEVYFVIMFIFMFLIGAVTGLFLSN 362
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
IDI LHDTY+VV HFHYVLS
Sbjct: 363 VGIDIMLHDTYFVVGHFHYVLS 384
Score = 46.8 bits (106), Expect = 4e-04
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 5/62 (8%)
Frame = +1
Query: 262 AIIG---GFIN*YPLFTGLSLNSYILKIQFF--TIFIGVNITFFPQHFLGLAGIPRRYSD 426
A++G GFI + L L + Y+ + +F T+FIG N+ FFP H LG+ PRR SD
Sbjct: 387 AVVGFFTGFI--HFLAKWLPIELYLFWMFYFISTLFIGSNMLFFPMHSLGMYAFPRRISD 444
Query: 427 YP 432
YP
Sbjct: 445 YP 446
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 79.4 bits (187), Expect = 7e-14
Identities = 34/77 (44%), Positives = 53/77 (68%)
Frame = +2
Query: 14 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 193
F +T++IA+P+ IK F ATI G ++ +N L + F+ +F VGGL+G+ +A +D
Sbjct: 356 FMVSTMMIALPSAIKTFNWTATIWGGKLEFNTVTLNCIAFLSMFIVGGLSGIFMAAVPVD 415
Query: 194 ITLHDTYYVVAHFHYVL 244
+ HDTY++VAHFHY+L
Sbjct: 416 VYFHDTYFIVAHFHYIL 432
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/57 (43%), Positives = 33/57 (57%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 426
+F + G +P G +N + K F FIG N TFFP HFLG+ G+PRRY+D
Sbjct: 437 LFGVFAGIQFWFPKMFGRMMNEKLGKTHFVLTFIGANGTFFPMHFLGMQGMPRRYAD 493
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 79.4 bits (187), Expect = 7e-14
Identities = 33/81 (40%), Positives = 54/81 (66%)
Frame = +2
Query: 5 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 184
R AT+ +A+P+G+K+F +AT++G +I +L L F+ F VGG+TGV
Sbjct: 311 RVAMAIATMAVAIPSGVKVFNWVATLYGGRIQLKAPMLFMLTFLLFFIVGGVTGVFFPVI 370
Query: 185 SIDITLHDTYYVVAHFHYVLS 247
++D+ LHDTY+V+ HFHY+++
Sbjct: 371 TLDLHLHDTYFVLGHFHYIVN 391
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 79.4 bits (187), Expect = 7e-14
Identities = 34/79 (43%), Positives = 57/79 (72%)
Frame = +2
Query: 8 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 187
++F+ T+ I++PTG+KIF L T++ +I++ +L L F+ F +GG+TGV+LA ++
Sbjct: 342 SFFSITTMAISIPTGVKIFNWLFTMYKGRISFTTPMLWALAFIPNFVIGGVTGVMLAMAA 401
Query: 188 IDITLHDTYYVVAHFHYVL 244
D H+TY++V+HFHYVL
Sbjct: 402 ADYQYHNTYFLVSHFHYVL 420
Score = 59.7 bits (138), Expect = 6e-08
Identities = 31/58 (53%), Positives = 34/58 (58%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
VFA GFI YP G LN I K F+ IG NI FFPQ+FLGL G+PRR Y
Sbjct: 425 VFACFAGFIFWYPKMFGHKLNERIGKWFFWIFMIGFNICFFPQYFLGLQGMPRRIYTY 482
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 79.4 bits (187), Expect = 7e-14
Identities = 33/78 (42%), Positives = 55/78 (70%)
Frame = +2
Query: 11 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 190
+F AT++I++PTG+K+F L TI+ ++ + I+ LGF+ F++GG+TGV+LA
Sbjct: 347 FFGLATMLISIPTGVKLFNWLFTIYQGRLRFTAPIMWTLGFMITFSIGGMTGVLLAVPGA 406
Query: 191 DITLHDTYYVVAHFHYVL 244
D LH++ +V+AHFH V+
Sbjct: 407 DFVLHNSLFVIAHFHNVI 424
Score = 36.3 bits (80), Expect = 0.63
Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = +1
Query: 244 INRRVFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRR-- 417
I VF I GF +P G +LN K F+ G + F P + LG G+ RR
Sbjct: 425 IGGAVFGYIAGFAYWFPKAFGFTLNEKWGKAAFWFWISGFYVAFMPLYALGFMGMTRRLN 484
Query: 418 YSDYP 432
+SD P
Sbjct: 485 HSDNP 489
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 79.0 bits (186), Expect = 9e-14
Identities = 34/76 (44%), Positives = 54/76 (71%)
Frame = +2
Query: 8 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 187
A+F AT+II++PTG+K+F L TI+ ++ + IL LGF+ F++GG+TGV+LA
Sbjct: 347 AFFGIATMIISIPTGVKLFNWLFTIYKGRLRFETPILWTLGFMVTFSIGGMTGVLLAVPG 406
Query: 188 IDITLHDTYYVVAHFH 235
D LH++ +++AHFH
Sbjct: 407 ADYVLHNSLFLIAHFH 422
>UniRef50_P98005 Cluster: Cytochrome c oxidase polypeptide I+III (EC
1.9.3.1) (Cytochrome c aa(3) subunit 1); n=2; Thermus
thermophilus|Rep: Cytochrome c oxidase polypeptide I+III
(EC 1.9.3.1) (Cytochrome c aa(3) subunit 1) - Thermus
thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Length = 791
Score = 79.0 bits (186), Expect = 9e-14
Identities = 35/77 (45%), Positives = 52/77 (67%)
Frame = +2
Query: 14 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 193
F T +IAVPTG+K+F + T+ G ++ + LGF+F F +GG+TGV+L+ + +D
Sbjct: 314 FAFFTALIAVPTGVKLFNIIGTLWGGKLQMKTPLYWVLGFIFNFLLGGITGVMLSMTPLD 373
Query: 194 ITLHDTYYVVAHFHYVL 244
HD+Y+VVAHFH VL
Sbjct: 374 YQFHDSYFVVAHFHNVL 390
Score = 43.6 bits (98), Expect = 0.004
Identities = 19/57 (33%), Positives = 29/57 (50%)
Frame = +1
Query: 259 FAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
F G +P TG + + ++ F+ +G +TF PQ+ LG G+PRRY Y
Sbjct: 396 FGAFAGLYYWWPKMTGRMYDERLGRLHFWLFLVGYLLTFLPQYALGYLGMPRRYYTY 452
>UniRef50_A5FXH8 Cluster: Cytochrome-c oxidase; n=1; Acidiphilium
cryptum JF-5|Rep: Cytochrome-c oxidase - Acidiphilium
cryptum (strain JF-5)
Length = 689
Score = 77.8 bits (183), Expect = 2e-13
Identities = 32/78 (41%), Positives = 57/78 (73%)
Frame = +2
Query: 11 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 190
+F++AT+++ +PTG+K+F T+ ++ + P +L LG +FL VGGLTG++LA +I
Sbjct: 366 FFSTATMLVGIPTGVKVFNWALTLWRGRLRFEPPMLWALGALFLLLVGGLTGMMLAIPAI 425
Query: 191 DITLHDTYYVVAHFHYVL 244
+ T+H++ +VVAHFH ++
Sbjct: 426 NYTVHNSVFVVAHFHCMM 443
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 77.0 bits (181), Expect = 4e-13
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +2
Query: 5 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 184
RA F + ++ IAVP+ +K F + T+ I +L +GFV F +GG+TGV LA+
Sbjct: 386 RASFMAVSLAIAVPSAVKTFNWITTMWNGNIRLTTPMLFSVGFVANFILGGVTGVFLASI 445
Query: 185 SIDITLHDTYYVVAHFHYVL 244
+D+ LH TYYVV HFHY++
Sbjct: 446 PVDLVLHATYYVVGHFHYIV 465
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/57 (42%), Positives = 31/57 (54%)
Frame = +1
Query: 259 FAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
FA G +PL+TG + K+ F+ IG NITFF LG G+PRRY+ Y
Sbjct: 471 FAGFAGIYYWFPLYTGRMYQRTLGKMHFWLSMIGTNITFFAMILLGYGGMPRRYATY 527
>UniRef50_P98000 Cluster: Alternative cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Alternative cytochrome c oxidase
polypeptide I) (Cytochrome BB3 subunit 1) (Oxidase BB(3)
subunit 1); n=25; Bacteria|Rep: Alternative cytochrome c
oxidase subunit 1 (EC 1.9.3.1) (Alternative cytochrome c
oxidase polypeptide I) (Cytochrome BB3 subunit 1)
(Oxidase BB(3) subunit 1) - Bradyrhizobium japonicum
Length = 591
Score = 75.4 bits (177), Expect = 1e-12
Identities = 34/78 (43%), Positives = 50/78 (64%)
Frame = +2
Query: 11 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 190
+F + T+IIA+PT IK++ + T+ I+ +L LGF+ F GGLTG+ L N +
Sbjct: 343 FFATTTLIIAIPTAIKVYNWVLTLWHGDIHLTVPMLFALGFIITFVNGGLTGLFLGNVVV 402
Query: 191 DITLHDTYYVVAHFHYVL 244
D+ L DT +VVAHFH V+
Sbjct: 403 DVPLSDTMFVVAHFHMVM 420
Score = 60.1 bits (139), Expect = 4e-08
Identities = 24/60 (40%), Positives = 35/60 (58%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
+ ++G + YP TG LN + K F+ F+G + FFP H+LGL G+PRRY + D
Sbjct: 425 IMVVLGAIYHWYPKVTGRMLNDVLGKFHFWVTFLGAYLIFFPMHYLGLLGVPRRYFELGD 484
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 75.4 bits (177), Expect = 1e-12
Identities = 32/80 (40%), Positives = 53/80 (66%)
Frame = +2
Query: 5 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 184
R+ F + ++ I++P+ +K+F + T+ ++ +L +GFV F +GG+TGV LA
Sbjct: 355 RSSFMAVSLAISIPSAVKVFNWITTMWNGKLRLTAPMLFCIGFVQNFIIGGVTGVFLAVI 414
Query: 185 SIDITLHDTYYVVAHFHYVL 244
ID+ LHDTYYVV HFH+++
Sbjct: 415 PIDLILHDTYYVVGHFHFIV 434
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/57 (33%), Positives = 28/57 (49%)
Frame = +1
Query: 259 FAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
FA+ +P+ TG + F+T +G N TF +LG G+PRRY+ Y
Sbjct: 440 FALFAASYYWFPMVTGRMYQKRLAHAHFWTALVGSNATFLAMLWLGYGGMPRRYATY 496
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 74.9 bits (176), Expect = 1e-12
Identities = 37/83 (44%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LAT-IHGTQINYNPNIL*RLGFVFLFTVGGLTGVILA 178
+R+YF+ AT II++PT +K+F + T G N + F+ F GG TG++L+
Sbjct: 310 SRSYFSIATSIISIPTSVKMFSYINTWASGRGFRGNNSSWSFFSFLICFCFGGFTGLLLS 369
Query: 179 NSSIDITLHDTYYVVAHFHYVLS 247
+ S+DI LHDTY+VV HFH VLS
Sbjct: 370 SGSLDIMLHDTYFVVGHFHTVLS 392
Score = 35.1 bits (77), Expect = 1.5
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 343 FTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
F + +G + F+P H GL+G+ RR +Y D
Sbjct: 425 FLLLVGALLVFYPMHLAGLSGMARRVPEYAD 455
>UniRef50_Q0AI64 Cluster: Cytochrome-c oxidase; n=3;
Proteobacteria|Rep: Cytochrome-c oxidase - Nitrosomonas
eutropha (strain C71)
Length = 703
Score = 74.1 bits (174), Expect = 3e-12
Identities = 31/76 (40%), Positives = 54/76 (71%)
Frame = +2
Query: 8 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 187
A F A+++I +PTG+KI+ + T+ +I ++ ++ L F+FLF +GG+TG++LAN
Sbjct: 366 AVFGIASMLIGIPTGVKIYDWMWTMLRGRIRFSVPMIYSLAFIFLFVIGGITGIMLANPI 425
Query: 188 IDITLHDTYYVVAHFH 235
+D +H+T ++VAHFH
Sbjct: 426 LDYQVHNTVFLVAHFH 441
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
+F ++ G+ +P G L+ +I + G FFP + LGL G+PRR Y
Sbjct: 449 LFGMLAGYTFWFPKAFGFRLDERWGRISAYCWIFGWMGAFFPLYILGLMGLPRRSVAY 506
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 73.7 bits (173), Expect = 3e-12
Identities = 35/80 (43%), Positives = 51/80 (63%)
Frame = +2
Query: 5 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 184
R F T++IA+PTG+K+F L T+ + N +L +G + F G+TGV+LA
Sbjct: 327 RHIFMFTTMLIAIPTGVKVFAWLGTLWAGNLRLNTPMLFCIGGLINFIFAGITGVMLATV 386
Query: 185 SIDITLHDTYYVVAHFHYVL 244
IDI + +TY+VVAHFHYV+
Sbjct: 387 PIDIHVGNTYFVVAHFHYVI 406
Score = 50.0 bits (114), Expect = 5e-05
Identities = 22/61 (36%), Positives = 32/61 (52%)
Frame = +1
Query: 247 NRRVFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSD 426
N VF + G + +P FTG + K+ F FIG + + P H+ GL G+PRR +
Sbjct: 408 NTIVFGVFAGIYHWFPKFTGKMYYEGLGKVHFVLTFIGATLNWLPLHWAGLLGMPRRVAS 467
Query: 427 Y 429
Y
Sbjct: 468 Y 468
>UniRef50_A0VUI8 Cluster: Cytochrome-c oxidase; n=1; Dinoroseobacter
shibae DFL 12|Rep: Cytochrome-c oxidase -
Dinoroseobacter shibae DFL 12
Length = 853
Score = 73.3 bits (172), Expect = 4e-12
Identities = 33/77 (42%), Positives = 54/77 (70%)
Frame = +2
Query: 14 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 193
F++A+ ++AVPTG++IF +AT+ + + LGF+F+F +GG+TGV++A +
Sbjct: 346 FSAASTMVAVPTGVQIFCFIATLSQGKPRLTVPMHFILGFLFIFVLGGMTGVMVAAVPFN 405
Query: 194 ITLHDTYYVVAHFHYVL 244
+ HD+Y+VVAH HYVL
Sbjct: 406 LQAHDSYFVVAHLHYVL 422
Score = 48.8 bits (111), Expect = 1e-04
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +1
Query: 244 INRRVFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYS 423
I VF + G P FTG ++ + K F+ +F G N+ FF H G+ G+PRR +
Sbjct: 423 IGGMVFPMFGALYYWVPHFTGRMMSERLGKWVFWLMFSGFNLAFFMMHLTGMRGMPRRVA 482
Query: 424 DYP 432
YP
Sbjct: 483 TYP 485
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 73.3 bits (172), Expect = 4e-12
Identities = 31/78 (39%), Positives = 51/78 (65%)
Frame = +2
Query: 11 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 190
+F+ T +I+VPTG+K F + T+ I + ++ +GF+ F GGLTG++LA+ +
Sbjct: 326 FFSFMTFLISVPTGVKFFNWVGTMWKGHITWETPMIWSVGFMATFLFGGLTGIMLASPPL 385
Query: 191 DITLHDTYYVVAHFHYVL 244
D L D+Y+++AHFHY L
Sbjct: 386 DFHLADSYFLIAHFHYTL 403
Score = 52.8 bits (121), Expect = 7e-06
Identities = 25/60 (41%), Positives = 36/60 (60%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
VFA G +P TG ++ + KI F+ F+G + TF QH++G G+PRRY+DY D
Sbjct: 408 VFASCAGVYFWFPKMTGRMMDERLGKIHFWLTFVGFHGTFLIQHWVGNMGMPRRYADYLD 467
>UniRef50_P39481 Cluster: Quinol oxidase subunit 1/3; n=5;
Sulfolobaceae|Rep: Quinol oxidase subunit 1/3 -
Sulfolobus acidocaldarius
Length = 788
Score = 71.3 bits (167), Expect = 2e-11
Identities = 29/76 (38%), Positives = 49/76 (64%)
Frame = +2
Query: 17 TSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDI 196
++ T+ IA+P+G+K+ AT++G +I Y + + F+ +F +GG+TGV ID
Sbjct: 304 SATTMAIAIPSGVKVLNWTATLYGGEIRYKTPTILLISFIVMFLLGGITGVFFPLVPIDY 363
Query: 197 TLHDTYYVVAHFHYVL 244
L+ TY+VV HFHY++
Sbjct: 364 ALNGTYFVVGHFHYMV 379
>UniRef50_Q9RR77 Cluster: Cytochrome c oxidase, subunit I; n=2;
Deinococcus|Rep: Cytochrome c oxidase, subunit I -
Deinococcus radiodurans
Length = 820
Score = 70.5 bits (165), Expect = 3e-11
Identities = 34/77 (44%), Positives = 48/77 (62%)
Frame = +2
Query: 14 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 193
F +T+I+AVPTG+KIF + T+ G +I +GF+F F +GG+TGV L D
Sbjct: 322 FMISTLIVAVPTGVKIFNLIGTLWGGRILMRMPTYWLIGFIFNFLIGGITGVSLGMIPFD 381
Query: 194 ITLHDTYYVVAHFHYVL 244
+ +YYVVAHFH V+
Sbjct: 382 YQVTMSYYVVAHFHNVM 398
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/58 (39%), Positives = 31/58 (53%)
Frame = +1
Query: 259 FAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 432
F + G +P TG L+ + F+ IG +TF PQ+ LGL G+PRRY YP
Sbjct: 404 FLAMAGLYYWWPKMTGRFLDEKVGLAHFWLFMIGSWLTFLPQYILGLLGMPRRYYTYP 461
>UniRef50_Q1IUK7 Cluster: Cytochrome-c oxidase; n=2;
Acidobacteria|Rep: Cytochrome-c oxidase - Acidobacteria
bacterium (strain Ellin345)
Length = 595
Score = 69.7 bits (163), Expect = 6e-11
Identities = 32/77 (41%), Positives = 48/77 (62%)
Frame = +2
Query: 14 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 193
F+ T+II +P + L +++G+++ N L LGF+ +F GG++G LA SID
Sbjct: 352 FSFPTLIITIPATVLTLIWLGSLYGSRLRINSASLFALGFISMFVSGGVSGFFLAQPSID 411
Query: 194 ITLHDTYYVVAHFHYVL 244
I LH TY+VV HFH V+
Sbjct: 412 IYLHATYFVVGHFHLVM 428
Score = 50.0 bits (114), Expect = 5e-05
Identities = 23/60 (38%), Positives = 32/60 (53%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
+F + G +P TG +N + KI F+ FIG F P H+LG+ G RRYS + D
Sbjct: 433 IFGVFAGTYFWFPKMTGHMMNETLGKIHFWGTFIGAYCIFMPFHYLGMVGNVRRYSSFVD 492
>UniRef50_A0TRU9 Cluster: Cytochrome-c oxidase; n=30;
Proteobacteria|Rep: Cytochrome-c oxidase - Burkholderia
cenocepacia MC0-3
Length = 1004
Score = 69.7 bits (163), Expect = 6e-11
Identities = 33/79 (41%), Positives = 52/79 (65%)
Frame = +2
Query: 8 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 187
A+F +A+++I++P+ + +F +ATI + + L GFV +F VGG++GV+ A
Sbjct: 338 AFFGAASMLISIPSAVAVFAWIATIWTGRPVFRTPFLYFAGFVLMFVVGGVSGVMTAAVP 397
Query: 188 IDITLHDTYYVVAHFHYVL 244
+D L DTY+VVAH HYVL
Sbjct: 398 LDWQLTDTYFVVAHLHYVL 416
Score = 60.5 bits (140), Expect = 3e-08
Identities = 25/59 (42%), Positives = 35/59 (59%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 432
VF ++GG +P FTG +N K+ F+ + +G N+ FFP H GL G+PRR YP
Sbjct: 421 VFPVLGGVAYWFPKFTGRMMNERFGKLTFWVVLVGFNLGFFPMHISGLLGMPRRIYTYP 479
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 69.3 bits (162), Expect = 7e-11
Identities = 28/35 (80%), Positives = 32/35 (91%)
Frame = +1
Query: 331 KIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
KI F +F+GVN+TFFPQHFLGLAG+PRRYSDYPD
Sbjct: 400 KIHFGVMFVGVNLTFFPQHFLGLAGMPRRYSDYPD 434
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 69.3 bits (162), Expect = 7e-11
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +2
Query: 14 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 193
F T+I+ V T IK+F + T++ + + GF+F GG+TG+ L S+D
Sbjct: 330 FGVLTMIVGVFTAIKVFNWVGTVYKGAVEFKTPFAYFCGFLFFTVFGGMTGIALGTVSLD 389
Query: 194 ITLHDTYYVVAHFHYVL 244
+ HDTY+VVAHFH+++
Sbjct: 390 VAWHDTYFVVAHFHFIM 406
Score = 40.3 bits (90), Expect = 0.039
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 349 IFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
I +G N TF PQ LG G+PRRY +YP+
Sbjct: 442 IILGFNATFIPQFLLGNNGMPRRYYEYPE 470
>UniRef50_A3SJL2 Cluster: QoxA, Quinol oxidase subunit I; n=2;
Rhodobacteraceae|Rep: QoxA, Quinol oxidase subunit I -
Roseovarius nubinhibens ISM
Length = 818
Score = 69.3 bits (162), Expect = 7e-11
Identities = 32/79 (40%), Positives = 51/79 (64%)
Frame = +2
Query: 8 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSS 187
A+F++A+ ++AVPT +++F + T+ + +L L F F +GGLTGV++A
Sbjct: 318 AFFSAASTLVAVPTAVQLFIWIGTLAKGAPRLHLPMLWLLAFFATFVIGGLTGVMVAIVP 377
Query: 188 IDITLHDTYYVVAHFHYVL 244
D +HDTY++VAH HYVL
Sbjct: 378 FDWQVHDTYFIVAHLHYVL 396
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/78 (38%), Positives = 51/78 (65%)
Frame = +2
Query: 14 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 193
F T++I++P+ + + + T+ + Y+ +L LG VF+F VGGLTG+ L + S+D
Sbjct: 342 FMLFTLLISIPSMVVVVNWVLTLWQGSLRYDTPMLFALGTVFVFGVGGLTGLFLGDISMD 401
Query: 194 ITLHDTYYVVAHFHYVLS 247
+ LHDT +VV HFH+ ++
Sbjct: 402 LYLHDTMFVVGHFHFTMA 419
>UniRef50_A4WT83 Cluster: Cytochrome c, monohaem; n=3;
Rhodobacteraceae|Rep: Cytochrome c, monohaem -
Rhodobacter sphaeroides ATCC 17025
Length = 878
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/78 (39%), Positives = 52/78 (66%)
Frame = +2
Query: 11 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 190
+F++A+ + +PTGI++F +AT+ ++ +L G + +FT GGLTGV++A +
Sbjct: 345 FFSAASEAVVIPTGIQLFAFVATLMVGRVKMILPMLWIAGGLAVFTAGGLTGVMVAIAPF 404
Query: 191 DITLHDTYYVVAHFHYVL 244
D +HDTY++VAH HY L
Sbjct: 405 DWQVHDTYFIVAHLHYTL 422
Score = 55.2 bits (127), Expect = 1e-06
Identities = 25/59 (42%), Positives = 34/59 (57%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 432
VF II G YP+ T +L+ + + F+ +F G N+TF P H GL G+PRR YP
Sbjct: 427 VFPIIAGVYYFYPVITKKALSERLGRWSFWLLFTGFNVTFLPMHLTGLKGMPRRVFTYP 485
>UniRef50_Q5P1W4 Cluster: Cytochrome c oxidase, subunit I; n=13;
Bacteria|Rep: Cytochrome c oxidase, subunit I - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 607
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 4/83 (4%)
Frame = +2
Query: 8 AYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNI----L*RLGFVFLFTVGGLTGVIL 175
++F +A+ +A+P+G+++F +AT + I L LGF+F+F +GGLTGV++
Sbjct: 387 SFFQAASTAVAIPSGMQVFAWIATFARGRATGRVRIATPTLFILGFLFIFVLGGLTGVMV 446
Query: 176 ANSSIDITLHDTYYVVAHFHYVL 244
A D HD+Y++VAH HYVL
Sbjct: 447 AVIPFDWQAHDSYFIVAHLHYVL 469
Score = 50.0 bits (114), Expect = 5e-05
Identities = 24/58 (41%), Positives = 33/58 (56%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
VF + F P + +L+ + + F +F+G NITFFP HF GLAG+PRR Y
Sbjct: 474 VFPLFAAFYYWMPYTSRQALSERLGRWVFGLMFVGFNITFFPMHFTGLAGMPRRVYTY 531
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 67.7 bits (158), Expect = 2e-10
Identities = 40/79 (50%), Positives = 43/79 (54%)
Frame = +2
Query: 11 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 190
Y SA P G+K F + + G P I F GGLTGVILANSS
Sbjct: 223 YLXSAXXFXXGPPGVK-FLGDSYLSGNFNFXKPQIFMIFSIYFSIHGGGLTGVILANSSX 281
Query: 191 DITLHDTYYVVAHFHYVLS 247
DI LHDTYYVVAH HYVLS
Sbjct: 282 DIILHDTYYVVAHXHYVLS 300
Score = 54.0 bits (124), Expect = 3e-06
Identities = 24/41 (58%), Positives = 31/41 (75%)
Frame = +3
Query: 330 KNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLIYFMK 452
KN+IF IYWSK+NIFS+T S NT+T+F LS ++FMK
Sbjct: 328 KNTIFSYIYWSKFNIFSSTLCSISSNTTTLFWLSSCLHFMK 368
>UniRef50_Q05FH1 Cluster: Cytochrome O ubiquinol oxidase subunit I;
n=1; Candidatus Carsonella ruddii PV|Rep: Cytochrome O
ubiquinol oxidase subunit I - Carsonella ruddii (strain
PV)
Length = 606
Score = 67.3 bits (157), Expect = 3e-10
Identities = 28/78 (35%), Positives = 52/78 (66%)
Frame = +2
Query: 11 YFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSI 190
+F+ +T+IIA+PTG+KIF + TI + + + F+ +F++GG +GVIL+ ++
Sbjct: 342 FFSISTMIIAIPTGVKIFNWIFTILFSNFKKDILFFWFISFIIIFSIGGFSGVILSIPNL 401
Query: 191 DITLHDTYYVVAHFHYVL 244
D H++ +++AHFH V+
Sbjct: 402 DFIFHNSMFLIAHFHSVI 419
Score = 34.7 bits (76), Expect = 1.9
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 4/59 (6%)
Frame = +1
Query: 265 IIGGFIN*YPLFTGLSLNSYIL--KIQFFTIF--IGVNITFFPQHFLGLAGIPRRYSDY 429
++ G+++ L+ L N+ L K F +F IGV +TFFP +FLG G+ RR + Y
Sbjct: 423 VLFGYLSGISLWYNLIYNNCELNNKFNFNILFWLIGVILTFFPFYFLGYCGMIRRINIY 481
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 66.5 bits (155), Expect = 5e-10
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +2
Query: 14 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 193
F ++ + + T IK+F AT++ I + GF+F GG+TG+ LA S+D
Sbjct: 323 FGVLSMFVGIFTAIKVFNWTATLYKGSIYFATPFAYFAGFLFFLVFGGMTGIALATVSLD 382
Query: 194 ITLHDTYYVVAHFHYVL 244
+ HDTY++VAHFH+++
Sbjct: 383 VHWHDTYFIVAHFHFIM 399
Score = 40.7 bits (91), Expect = 0.029
Identities = 21/64 (32%), Positives = 28/64 (43%)
Frame = +1
Query: 244 INRRVFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYS 423
+ V A + +P G L + I +G N TF PQ LG G+PRRY
Sbjct: 400 VGATVMAFLAALHYWFPKIAGKRLPEGWGLVAAVMIILGFNFTFIPQFLLGNEGMPRRYF 459
Query: 424 DYPD 435
YP+
Sbjct: 460 SYPE 463
>UniRef50_P11947 Cluster: Cytochrome c oxidase subunit 1; n=48;
Oligohymenophorea|Rep: Cytochrome c oxidase subunit 1 -
Tetrahymena pyriformis
Length = 698
Score = 65.7 bits (153), Expect = 9e-10
Identities = 29/82 (35%), Positives = 53/82 (64%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
+R +++ TI+I++P IK+ ++ + + L + F+ LF V G TG+ L++
Sbjct: 461 SRTMYSTITIMISMPATIKVVNWTLSLVNGALKVDLPFLFSMSFLLLFLVAGFTGMWLSH 520
Query: 182 SSIDITLHDTYYVVAHFHYVLS 247
S+++++HDT+YVVAHFH +LS
Sbjct: 521 VSLNVSMHDTFYVVAHFHIMLS 542
Score = 34.7 bits (76), Expect = 1.9
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 432
+ I GF + G+ + + G + F PQ +LG +G+PRR DYP
Sbjct: 546 ITGIFSGFYYYFNALFGIKFSRMFGYMHLIYYSGGQWVAFVPQFYLGFSGMPRRIHDYP 604
>UniRef50_Q9Z605 Cluster: Quinol oxidase subunit I; n=15;
Proteobacteria|Rep: Quinol oxidase subunit I -
Rhodobacter sphaeroides (Rhodopseudomonas sphaeroides)
Length = 825
Score = 65.3 bits (152), Expect = 1e-09
Identities = 33/80 (41%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Frame = +2
Query: 8 AYFTSATIIIAVPTGIKIFR*LATI-HGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 184
A F++A+ ++AVPT +++F + T+ GT P ++ L F F +GGLTGV++A
Sbjct: 318 ALFSAASTLVAVPTAVQLFAWIGTLWRGTPEMRLP-MMWILAFFATFVIGGLTGVMVAVV 376
Query: 185 SIDITLHDTYYVVAHFHYVL 244
D +HDT+++VAH HYVL
Sbjct: 377 PFDWQVHDTHFIVAHLHYVL 396
>UniRef50_Q8LX82 Cluster: Cytochrome c oxidase subunit I; n=3;
Chaoborus|Rep: Cytochrome c oxidase subunit I -
Chaoborus obscuripes
Length = 206
Score = 63.7 bits (148), Expect = 4e-09
Identities = 34/65 (52%), Positives = 39/65 (60%)
Frame = +3
Query: 261 CNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRLI 440
CNY GIY L+ I K L KNSIFYNI+ K IFSTTFF S +T T+ S LI
Sbjct: 91 CNYIGIYSLMPLINSTNNKSLMIKNSIFYNIFSGKSYIFSTTFFSISSDTPTMLSFSSLI 150
Query: 441 YFMKY 455
+KY
Sbjct: 151 QLLKY 155
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/26 (88%), Positives = 24/26 (92%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LAT 79
TRAYFTSAT+IIAVPTGIKIF LAT
Sbjct: 4 TRAYFTSATMIIAVPTGIKIFSWLAT 29
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 63.3 bits (147), Expect = 5e-09
Identities = 29/81 (35%), Positives = 50/81 (61%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILAN 181
TR +++ TI+I++P + + + T++ ++ Y +L +G + F +GG TGV L +
Sbjct: 308 TRLFYSITTILISIPFEMAVMSFIFTLYKGRLVYTVPMLFAVGALLNFIIGGSTGVYLGS 367
Query: 182 SSIDITLHDTYYVVAHFHYVL 244
+ID TY+VVAHFHY+L
Sbjct: 368 IAIDRGFRGTYWVVAHFHYIL 388
Score = 37.1 bits (82), Expect = 0.36
Identities = 20/55 (36%), Positives = 28/55 (50%)
Frame = +1
Query: 265 IIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
+I G +P TG + + + KI F +GV +TF PQ L +PRRY Y
Sbjct: 396 LIAGLYYWWPKITGRTYSERLGKIHFALAMLGVALTFLPQ--FALMDMPRRYFTY 448
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 62.5 bits (145), Expect = 8e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Frame = +3
Query: 546 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 638
LFSLN+PSSIE YQNLPPAEHSYNELPIL N
Sbjct: 456 LFSLNMPSSIEWYQNLPPAEHSYNELPILSN 486
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = +2
Query: 5 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 184
+ F + TI I++P + +F + T+ ++ + L LG + LF +GG+TGV L
Sbjct: 323 KTIFMATTIGISLPFDLMVFSLIYTMAKGRVRFTTPFLFSLGALILFIIGGITGVFLGAI 382
Query: 185 SIDITLHDTYYVVAHFHYVL 244
+D TY+VVAHFHYV+
Sbjct: 383 VLDYQFRGTYWVVAHFHYVM 402
Score = 41.5 bits (93), Expect = 0.017
Identities = 23/58 (39%), Positives = 30/58 (51%)
Frame = +1
Query: 262 AIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYPD 435
A+ GG YP TG N + KIQF F+G N+ +FP F+ PRR YP+
Sbjct: 408 ALFGGLYYWYPKITGKMYNETLGKIQFGVYFLGFNLLYFPM-FIAWE-TPRRVFVYPE 463
>UniRef50_Q8LX68 Cluster: Cytochrome oxidase I; n=2; Chaoborus|Rep:
Cytochrome oxidase I - Chaoborus pallidus
Length = 206
Score = 61.7 bits (143), Expect = 1e-08
Identities = 34/67 (50%), Positives = 40/67 (59%)
Frame = +3
Query: 255 SICNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSR 434
SICNY IY L+ + F K KNSI+ NIY SK NIFS TFF +T +F SR
Sbjct: 89 SICNYISIYPLMPPLNWTFYKSKMIKNSIYNNIYSSKSNIFSPTFFSACRDTPPLFWFSR 148
Query: 435 LIYFMKY 455
LI +KY
Sbjct: 149 LILLLKY 155
Score = 34.3 bits (75), Expect = 2.5
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +1
Query: 61 F*MTSYNTWNSN*L*P*YFMKIRFCIFIHSRRINRCNFSQF 183
F MT Y +W++N L P + FC FI+ N +FSQF
Sbjct: 24 FLMTCYPSWDTNLLHPSPPLSFSFCFFIYRWSFNSGSFSQF 64
>UniRef50_O86945 Cluster: Sub-unit I of an aa3-type cytochrome
oxidase; n=1; Acidithiobacillus ferrooxidans|Rep:
Sub-unit I of an aa3-type cytochrome oxidase -
Thiobacillus ferrooxidans (Acidithiobacillus
ferrooxidans)
Length = 627
Score = 60.5 bits (140), Expect = 3e-08
Identities = 28/74 (37%), Positives = 44/74 (59%)
Frame = +2
Query: 14 FTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSID 193
F + T +++PTG + TI G ++ N +L L + F +GGLTG+ A+ D
Sbjct: 396 FMTITETVSIPTGFIYLSAIGTIWGGRLRINAAVLLVLMAMMNFLIGGLTGIFNADVPAD 455
Query: 194 ITLHDTYYVVAHFH 235
+ LH+TY+V+AHFH
Sbjct: 456 LQLHNTYWVIAHFH 469
>UniRef50_Q34505 Cluster: Cytochrome c oxidase subunit I; n=46;
Neoptera|Rep: Cytochrome c oxidase subunit I - Eueides
tales
Length = 95
Score = 59.7 bits (138), Expect = 6e-08
Identities = 26/31 (83%), Positives = 28/31 (90%)
Frame = +3
Query: 546 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 638
LFSLN+PSSIE YQN PP+EHSYNELPIL N
Sbjct: 44 LFSLNMPSSIEWYQNFPPSEHSYNELPILSN 74
>UniRef50_Q6KZG3 Cluster: Cytochrome c oxidase polypeptide I/III;
n=2; Thermoplasmatales|Rep: Cytochrome c oxidase
polypeptide I/III - Picrophilus torridus
Length = 841
Score = 55.6 bits (128), Expect = 1e-06
Identities = 28/73 (38%), Positives = 43/73 (58%)
Frame = +2
Query: 26 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 205
T I++PT + I +AT+ G + + IL L F +GG++GV ++ +ID +H
Sbjct: 337 TETISIPTSMLIVGLIATMIGGRHKFQTPILFALAASTSFMIGGVSGVTQSSLAIDTIVH 396
Query: 206 DTYYVVAHFHYVL 244
YYVVAHFHY +
Sbjct: 397 GDYYVVAHFHYFM 409
Score = 34.7 bits (76), Expect = 1.9
Identities = 19/58 (32%), Positives = 29/58 (50%)
Frame = +1
Query: 256 VFAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDY 429
V ++G +P FTG + + +I + + GVNI +FP F L +PRR Y
Sbjct: 414 VMGLMGNLYYYFPKFTGRMYSEKLGRIHWAFAYPGVNILYFPMFF--LYDLPRRVYTY 469
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 54.8 bits (126), Expect = 2e-06
Identities = 26/58 (44%), Positives = 32/58 (55%)
Frame = +1
Query: 259 FAIIGGFIN*YPLFTGLSLNSYILKIQFFTIFIGVNITFFPQHFLGLAGIPRRYSDYP 432
F IG F +P TG N + KI F F+G + FF QH LG+ G+PRR DYP
Sbjct: 388 FGSIGFFYYMFPFVTGRMYNEKLGKIHFVFSFVGAVLLFFTQHILGIYGMPRRVYDYP 445
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +2
Query: 5 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANS 184
+ F T+ + + +F +AT+ +I ++ ++ +G + LF G GV+ A
Sbjct: 303 KTVFMLGTLAAVPASAMHVFNFVATMWNGRIRFDSPMMWSIGGIALFFSAGAGGVLNAAM 362
Query: 185 SIDITLHDTYYVVAHFH 235
+D T HDTY+VV HFH
Sbjct: 363 PLDFTTHDTYWVVGHFH 379
>UniRef50_O03826 Cluster: Cytochrome oxidase subunit I; n=21;
Prodoxidae|Rep: Cytochrome oxidase subunit I - Greya
powelli
Length = 52
Score = 54.0 bits (124), Expect = 3e-06
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +3
Query: 546 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 638
LFSLN+ SSIE QN PPAEHSYNELPIL N
Sbjct: 21 LFSLNMNSSIEWLQNFPPAEHSYNELPILTN 51
>UniRef50_A1INK5 Cluster: Cytochrome c oxidase subunit I; n=71;
Pancrustacea|Rep: Cytochrome c oxidase subunit I -
Psilochaeta pampiana
Length = 76
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/31 (70%), Positives = 25/31 (80%)
Frame = +3
Query: 546 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 638
LFS+ L SSIE QN PPAEHSY+ELP+L N
Sbjct: 45 LFSIQLCSSIEWLQNSPPAEHSYSELPLLTN 75
>UniRef50_Q6RCN4 Cluster: Cytochrome c oxidase subunit I; n=1;
Bucephalid sp. KH-2004|Rep: Cytochrome c oxidase subunit
I - Bucephalid sp. KH-2004
Length = 121
Score = 45.6 bits (103), Expect = 0.001
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL-*RLGFVFLFTVGGLTG 166
T +F+S T+II VPTGIK+F L + ++ N I+ +GF+FLFT+GG G
Sbjct: 41 TAVFFSSVTMIIGVPTGIKVFGWLYMLGTSRHCLNTVIVWWIIGFIFLFTMGGRQG 96
>UniRef50_Q5VIA7 Cluster: Cytochrome oxidase subunit I; n=1; Psyche
norvegica|Rep: Cytochrome oxidase subunit I - Psyche
norvegica
Length = 63
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 546 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 638
LF N+ SSIE +QN PPA HSY+E+PIL N
Sbjct: 32 LFPSNMTSSIEWFQNTPPANHSYDEMPILIN 62
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/37 (62%), Positives = 25/37 (67%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPN 112
TRAYFTSAT+IIA+PTGIKIF L N N N
Sbjct: 301 TRAYFTSATMIIAIPTGIKIFSWLMNPFSKDKNKNKN 337
>UniRef50_Q5W4C3 Cluster: Cytochrome oxidase subunit I; n=79;
Pterygota|Rep: Cytochrome oxidase subunit I -
Biopyrellia bipuncta
Length = 68
Score = 45.2 bits (102), Expect = 0.001
Identities = 20/31 (64%), Positives = 24/31 (77%)
Frame = +3
Query: 546 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 638
+F + L SS+E QN PPAEHSYNELP+L N
Sbjct: 37 IFPVQLNSSMEWLQNTPPAEHSYNELPLLVN 67
>UniRef50_Q35528 Cluster: Cytochrome oxidase subunit I; n=39;
Aphidoidea|Rep: Cytochrome oxidase subunit I - Pemphigus
microsetosus
Length = 68
Score = 44.8 bits (101), Expect = 0.002
Identities = 19/31 (61%), Positives = 24/31 (77%)
Frame = +3
Query: 546 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 638
+F LNL +SIE NLPP EHSY+ELP++ N
Sbjct: 37 MFKLNLNNSIEWIHNLPPLEHSYSELPLVTN 67
>UniRef50_Q5VI63 Cluster: SoxB; n=3; Sulfolobaceae|Rep: SoxB -
Acidianus brierleyi
Length = 148
Score = 44.4 bits (100), Expect = 0.002
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = +2
Query: 5 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFL-----FTVGGLTGV 169
RA+ T +T+++A +G+ + TI T Y+ LG FL F +GG+ +
Sbjct: 66 RAWITVSTLVLASGSGLTVLNLGLTIL-TSKGYDYKD--PLGMTFLIALIGFIIGGVQAL 122
Query: 170 ILANSSIDITLHDTYYVVAHFHYVL 244
L + I+ +H+TYYVV HFHY++
Sbjct: 123 PLPINIINGVVHNTYYVVGHFHYMV 147
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/39 (56%), Positives = 25/39 (64%)
Frame = +1
Query: 514 FENQ*LTNELTYFL*ISHHQLNDIKIYHQQNIHIMNYQF 630
FENQ EL Y + LND KIY QQ+IH+MNYQF
Sbjct: 469 FENQSFITELLYLPSMYLLLLNDTKIYLQQSIHMMNYQF 507
Score = 39.5 bits (88), Expect = 0.067
Identities = 27/47 (57%), Positives = 27/47 (57%)
Frame = +2
Query: 326 Y*KFNFLQYLLE*I*HFFHNIF*V*LEYLDDIQIIQTHIFHEI*FLH 466
Y KFNFL Y E I F NIF LEYLDDI IIQ EI F H
Sbjct: 406 YSKFNFLLYSSELISLFSLNIFSGSLEYLDDILIIQILTSLEISFHH 452
Score = 38.3 bits (85), Expect = 0.16
Identities = 21/34 (61%), Positives = 23/34 (67%)
Frame = +3
Query: 57 KFLDD*LQYMELKLIITLIFYED*VLYFYSQ*ED 158
KFL D +MELKLI+ L FYED L FY Q ED
Sbjct: 316 KFLVDWQPFMELKLIMVLQFYEDWDLCFYLQSED 349
>UniRef50_A2T428 Cluster: Putative uncharacterized protein ORF820;
n=1; Placozoan sp. BZ49|Rep: Putative uncharacterized
protein ORF820 - Placozoan sp. BZ49
Length = 820
Score = 42.7 bits (96), Expect = 0.007
Identities = 19/21 (90%), Positives = 21/21 (100%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIF 64
TRAYFT+AT+IIAVPTGIKIF
Sbjct: 10 TRAYFTAATMIIAVPTGIKIF 30
>UniRef50_Q396U4 Cluster: Cytochrome c oxidase, subunit I; n=18;
Proteobacteria|Rep: Cytochrome c oxidase, subunit I -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 541
Score = 41.5 bits (93), Expect = 0.017
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Frame = +1
Query: 289 YPLFTGLSLNSY-ILKIQFFTIFIGVNITFFPQHFLGLAGIPRR--YSDYPD 435
+P TG +L +++ Q + FIG+ +T FP H++G+ G+PRR Y DY D
Sbjct: 387 WPHLTGRALTHVRLMRWQLWLWFIGMIVTTFPWHWVGILGMPRRMAYYDYGD 438
Score = 36.3 bits (80), Expect = 0.63
Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 104 NPNIL*RLGFVFLFT-VGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 247
NP +L L F F+ GG G+I + +D T+H+T ++ HFH + +
Sbjct: 325 NPQML-ALAFSFVMLGFGGAGGLINMSYQLDTTIHNTQWITGHFHLIFA 372
>UniRef50_O67937 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 592
Score = 41.5 bits (93), Expect = 0.017
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +2
Query: 140 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 235
LF +GG+TG++ A+ ++++ +H+T YV HFH
Sbjct: 354 LFFIGGITGIVNASYNVNLVVHNTAYVPGHFH 385
>UniRef50_Q8WFY0 Cluster: Cytochrome oxidase subunit I; n=5;
Eumalacostraca|Rep: Cytochrome oxidase subunit I -
Paguristes turgidus
Length = 68
Score = 40.3 bits (90), Expect = 0.039
Identities = 17/31 (54%), Positives = 24/31 (77%)
Frame = +3
Query: 546 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 638
+FSL+L SSIE + PPA+HSY E+P++ N
Sbjct: 37 MFSLSLASSIEWEHSYPPADHSYMEIPMISN 67
>UniRef50_Q1XAB3 Cluster: Cytochrome oxidase subunit I; n=14;
Neoptera|Rep: Cytochrome oxidase subunit I - Kalotermes
flavicollis
Length = 57
Score = 40.3 bits (90), Expect = 0.039
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = +3
Query: 546 LFSLNLPSSIE*YQNLPPAEHSYNELPIL 632
LF +SIE QNLPPAEHSY+ELP +
Sbjct: 25 LFPTQTSNSIEWIQNLPPAEHSYSELPTI 53
>UniRef50_A3H8Y4 Cluster: Cytochrome-c oxidase precursor; n=1;
Caldivirga maquilingensis IC-167|Rep: Cytochrome-c
oxidase precursor - Caldivirga maquilingensis IC-167
Length = 529
Score = 40.3 bits (90), Expect = 0.039
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +2
Query: 23 ATIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITL 202
+T+ I++ + + +F LA + + I P + L +F + G +GV A + ++ L
Sbjct: 332 STMGISIVSAVSVFALLAMMWRSGIKMTPPYMFSLIAMFAWLEAGYSGVAQAIVAWNLYL 391
Query: 203 HDTYYVVAHFH 235
H+T +VVAHFH
Sbjct: 392 HNTLWVVAHFH 402
>UniRef50_Q9YBH5 Cluster: Cytochrome c oxidase (Ba3-type) subunit I;
n=1; Aeropyrum pernix|Rep: Cytochrome c oxidase
(Ba3-type) subunit I - Aeropyrum pernix
Length = 548
Score = 39.5 bits (88), Expect = 0.067
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 134 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 235
+ LF GG+TG+I A+ ++ +H+T ++V HFH
Sbjct: 340 IILFANGGITGIINASFQLNTVVHNTTWIVGHFH 373
>UniRef50_Q6Y3P5 Cluster: Cytochrome oxidase subunit I; n=4;
Talitridae|Rep: Cytochrome oxidase subunit I - Talitrus
saltator
Length = 59
Score = 37.9 bits (84), Expect = 0.21
Identities = 13/31 (41%), Positives = 24/31 (77%)
Frame = +3
Query: 546 LFSLNLPSSIE*YQNLPPAEHSYNELPILRN 638
+F +++P+S+E + PPA+HSY++ P+L N
Sbjct: 28 MFHMHMPTSLEWHHPSPPADHSYDDTPLLTN 58
>UniRef50_P98004 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Cytochrome aa3 subunit
1) (Oxidase aa(3) subunit 1); n=5; Sulfolobaceae|Rep:
Quinol oxidase subunit 1 (EC 1.10.3.-) (Quinol oxidase
polypeptide I) (Cytochrome aa3 subunit 1) (Oxidase aa(3)
subunit 1) - Sulfolobus acidocaldarius
Length = 517
Score = 37.9 bits (84), Expect = 0.21
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Frame = +2
Query: 5 RAYFTSATIIIAVPTGIKIFR*LATIHGTQINYN---PNIL*RLGFVFLFTVGGLTGVIL 175
R + +T+I+A +G+ + TI T Y+ P + L + F + G ++L
Sbjct: 296 REWVNLSTLILATGSGLTVLNLGLTIF-TSRKYDWKDPVGMGALISLIGFILAGAQALVL 354
Query: 176 ANSSIDITLHDTYYVVAHFHYVL 244
+SI+ H++YYVV HFH ++
Sbjct: 355 PENSINPLFHNSYYVVGHFHLMI 377
>UniRef50_Q8ZXC1 Cluster: Cytochrome C oxidase subunit I; n=3;
Pyrobaculum|Rep: Cytochrome C oxidase subunit I -
Pyrobaculum aerophilum
Length = 557
Score = 37.5 bits (83), Expect = 0.27
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +2
Query: 134 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 235
+ LF + G +GV+ A+ +++ +H+T +VV HFH
Sbjct: 340 IILFGIAGFSGVVNASFNVNYNVHNTAWVVGHFH 373
>UniRef50_Q981A5 Cluster: Heme bearing subunit I of the terminal
oxidase; n=8; Sulfolobaceae|Rep: Heme bearing subunit I
of the terminal oxidase - Sulfolobus solfataricus
Length = 593
Score = 37.1 bits (82), Expect = 0.36
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 26 TIIIAVPTGIKIFR*LATIHGTQINYNPNIL*RLGFVFLFTVGGLTGVILANSSIDITLH 205
T + +P+ + F AT G + +N + G+TG+ A S D +H
Sbjct: 316 TYSVVIPSMMTFFNLWATAKGADVKWNIITAWTVTSFAGAIAAGVTGISNATISFDAIVH 375
Query: 206 DTYYVVAHFHYVL 244
+T +VV HFH ++
Sbjct: 376 NTDWVVGHFHAMI 388
>UniRef50_Q3INR3 Cluster: Cytochrome-c-like terminal oxidase,
subunit I 3; n=1; Natronomonas pharaonis DSM 2160|Rep:
Cytochrome-c-like terminal oxidase, subunit I 3 -
Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
Length = 575
Score = 37.1 bits (82), Expect = 0.36
Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 8/84 (9%)
Frame = +2
Query: 8 AYFTSATIIIAVPTGIKIFR*LATIHGTQINY-------NPNIL*RLGFVFLFT-VGGLT 163
A F S A+P G++ R + G + NP + + LF +GG+T
Sbjct: 316 AAFASMIHAFAIPAGLEAGRRQRGLGGGLFGWLTSGPWKNPVFSATIFSIILFGFMGGIT 375
Query: 164 GVILANSSIDITLHDTYYVVAHFH 235
GV++ +++T H+T+ V HFH
Sbjct: 376 GVLMGQLQLNMTWHNTFATVGHFH 399
>UniRef50_Q9TCU2 Cluster: Cytochrome c oxidase subunit I; n=1;
Taenia saginata|Rep: Cytochrome c oxidase subunit I -
Taenia saginata (Beef tapeworm)
Length = 147
Score = 36.7 bits (81), Expect = 0.48
Identities = 17/39 (43%), Positives = 25/39 (64%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHGTQINYNPNIL 118
T +F+S T+II VPTGIK+F L + +++N IL
Sbjct: 64 TAVFFSSVTMIIRVPTGIKVFTWLYMLSNSRVNKXDPIL 102
>UniRef50_Q2W549 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=3; Magnetospirillum|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Magnetospirillum magneticum (strain AMB-1 / ATCC 700264)
Length = 560
Score = 36.3 bits (80), Expect = 0.63
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +2
Query: 125 LGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 235
L + +GG++GV + I+I +H+T YV HFH
Sbjct: 351 LSLILFGFLGGISGVTMGVEQINIMIHNTIYVPGHFH 387
>UniRef50_Q28SZ6 Cluster: Cytochrome c oxidase subunit I; n=1;
Jannaschia sp. CCS1|Rep: Cytochrome c oxidase subunit I
- Jannaschia sp. (strain CCS1)
Length = 155
Score = 36.3 bits (80), Expect = 0.63
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 167 VILANSSIDITLHDTYYVVAHFHYV 241
+ L+ D T HDTYYVVAH HY+
Sbjct: 29 IALSQPGADGTYHDTYYVVAHIHYL 53
>UniRef50_Q9EMW4 Cluster: AMV085; n=1; Amsacta moorei entomopoxvirus
'L'|Rep: AMV085 - Amsacta moorei entomopoxvirus (AmEPV)
Length = 204
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/62 (27%), Positives = 35/62 (56%)
Frame = +3
Query: 258 ICNYWGIY*LISFIYRPFIKFLYTKNSIFYNIYWSKYNIFSTTFFRFSWNTSTIFRLSRL 437
+ N G+Y +I Y+ + LY K IF +I++ KYN++ + + +N + F +++
Sbjct: 13 VLNNDGLYDIIP--YKASLSILYNKKIIFNDIFFIKYNLYESRVDKKKFNNAISFLMNKN 70
Query: 438 IY 443
I+
Sbjct: 71 IF 72
>UniRef50_Q604Y9 Cluster: Cytochrome c oxidase, subunit I; n=1;
Methylococcus capsulatus|Rep: Cytochrome c oxidase,
subunit I - Methylococcus capsulatus
Length = 537
Score = 35.5 bits (78), Expect = 1.1
Identities = 13/48 (27%), Positives = 29/48 (60%)
Frame = +2
Query: 104 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFHYVLS 247
NP +L + + + +GG G++ A+ +++ +H+T +V HFH + +
Sbjct: 327 NPMVLAAILSLLMLVLGGFGGIVNASYAMNAMVHNTAWVPGHFHLIFA 374
>UniRef50_Q2VQT0 Cluster: Heme-copper oxygen reductase; n=1;
Rhodothermus marinus|Rep: Heme-copper oxygen reductase -
Rhodothermus marinus (Rhodothermus obamensis)
Length = 561
Score = 35.5 bits (78), Expect = 1.1
Identities = 15/44 (34%), Positives = 29/44 (65%)
Frame = +2
Query: 104 NPNIL*RLGFVFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 235
+P++ +L + F GG+TG+I A+ +++ +H+T +V HFH
Sbjct: 346 DPSLSAQLLAMITFVFGGITGLINASFTMNQVVHNTTWVPGHFH 389
>UniRef50_Q8HN76 Cluster: Cytochrome c oxidase subunit I; n=21;
Aphidomorpha|Rep: Cytochrome c oxidase subunit I -
Phylloxera sp. DAD-2001a
Length = 83
Score = 35.5 bits (78), Expect = 1.1
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 546 LFSLNLPSSIE*YQNLPPAEHSYNELPIL 632
+F LNL +SI N+PP H+Y+ELP++
Sbjct: 52 IFKLNLNNSIGWIHNMPPIGHTYSELPLI 80
>UniRef50_A5URU0 Cluster: Cytochrome c oxidase, subunit I; n=4;
Chloroflexaceae|Rep: Cytochrome c oxidase, subunit I -
Roseiflexus sp. RS-1
Length = 561
Score = 34.7 bits (76), Expect = 1.9
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 134 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 235
+ LF GG G+I A+ +I++ +H+T ++ HFH
Sbjct: 359 MILFAFGGAGGLINASYNINLVVHNTSWISGHFH 392
>UniRef50_A7D123 Cluster: Cytochrome-c oxidase; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Cytochrome-c oxidase -
Halorubrum lacusprofundi ATCC 49239
Length = 597
Score = 34.7 bits (76), Expect = 1.9
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +2
Query: 140 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 235
+F GG +G++ A +I+ +H+T +V HFH
Sbjct: 358 MFAAGGFSGMVNAGMNINYMIHNTIWVPGHFH 389
>UniRef50_Q9KEW0 Cluster: Cytochrome c oxidase subunit I; n=8;
Bacillaceae|Rep: Cytochrome c oxidase subunit I -
Bacillus halodurans
Length = 564
Score = 34.3 bits (75), Expect = 2.5
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 134 VFLFTVGGLTGVILANSSIDITLHDTYYVVAHFH 235
+ F GG+ G+I A+ ++ +H+T +VV HFH
Sbjct: 353 MLFFIPGGIGGIINASFQLNEVVHNTLWVVGHFH 386
>UniRef50_Q9TCV5 Cluster: Cytochrome c oxidase subunit I; n=6;
Digenea|Rep: Cytochrome c oxidase subunit I -
Echinostoma hortense
Length = 154
Score = 33.5 bits (73), Expect = 4.4
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 2 TRAYFTSATIIIAVPTGIKIFR*LATIHG 88
T +F+S T++I +PTGIK+F L + G
Sbjct: 65 TAVFFSSVTMVIGIPTGIKVFSWLIMLGG 93
>UniRef50_O07289 Cluster: Subunit I-homologue of cytochrome oxidase;
n=6; cellular organisms|Rep: Subunit I-homologue of
cytochrome oxidase - Natronomonas pharaonis
(Natronobacterium pharaonis)
Length = 581
Score = 33.1 bits (72), Expect = 5.9
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +2
Query: 140 LFTVGGLTGVILANSSIDITLHDTYYVVAHFH 235
+F +G++ A +I+ +H+T++VV HFH
Sbjct: 350 MFAAAAFSGMVNAGMNINYLVHNTWWVVGHFH 381
>UniRef50_Q56408 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome c ba(3) subunit I); n=4; Deinococci|Rep:
Cytochrome c oxidase subunit 1 (EC 1.9.3.1) (Cytochrome
c oxidase polypeptide I) (Cytochrome c ba(3) subunit I)
- Thermus thermophilus
Length = 108
Score = 32.7 bits (71), Expect = 7.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 143 FTVGGLTGVILANSSIDITLHDTYYVVAHFH 235
F GG G++ A+ ++D +H+T +V HFH
Sbjct: 21 FIPGGAGGIVNASFTLDYVVHNTAWVPGHFH 51
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 426,103,329
Number of Sequences: 1657284
Number of extensions: 6575008
Number of successful extensions: 16238
Number of sequences better than 10.0: 119
Number of HSP's better than 10.0 without gapping: 15630
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16214
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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