Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0137
         (508 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    22   2.7  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    22   3.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   4.8  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -1

Query: 223  MR*KYIFTYLLLNSL 179
            +R K +FT+L+LNSL
Sbjct: 1221 LRDKMVFTFLMLNSL 1235


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/15 (60%), Positives = 13/15 (86%)
 Frame = -1

Query: 223  MR*KYIFTYLLLNSL 179
            +R K +FT+L+LNSL
Sbjct: 1221 LRDKMVFTFLMLNSL 1235


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 317 CILYFILNIIFLVNTML 367
           C LY+IL I  +VN  L
Sbjct: 168 CSLYYILQITLIVNYAL 184


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 6/10 (60%), Positives = 10/10 (100%)
 Frame = -3

Query: 476 CIYVTLLHKC 447
           CI++++LHKC
Sbjct: 85  CIHLSVLHKC 94


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 125 IRLYLKTKQKKSFLIQFCKTV 187
           I LY  +K  +  LIQFC  V
Sbjct: 168 IVLYTLSKMSQVMLIQFCAFV 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,648
Number of Sequences: 336
Number of extensions: 2487
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12049355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)