Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0137
         (508 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled ...    24   2.6  
AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding pr...    23   7.9  
AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative odorant-b...    23   7.9  

>AY553322-1|AAT36323.1|  426|Anopheles gambiae G-protein coupled
           receptor 4 protein.
          Length = 426

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +2

Query: 41  LYSFAGRF*IELCQISRLLNEDELTDSN 124
           L   +G + + LC+IS    E E +DSN
Sbjct: 256 LMIISGAYTVILCEISNRSREKETSDSN 283


>AY146737-1|AAO12097.1|  119|Anopheles gambiae odorant-binding
           protein AgamOBP27 protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 294 CF*ECIMKKKSFINQS 247
           CF EC +K+  F+N +
Sbjct: 45  CFGECFVKRAGFMNDN 60


>AJ697722-1|CAG26915.1|  119|Anopheles gambiae putative
           odorant-binding protein OBPjj12 protein.
          Length = 119

 Score = 22.6 bits (46), Expect = 7.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 294 CF*ECIMKKKSFINQS 247
           CF EC +K+  F+N +
Sbjct: 45  CFGECFVKRAGFMNDN 60


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,351
Number of Sequences: 2352
Number of extensions: 8607
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45668772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)