Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0127
         (515 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY047515-1|AAK77247.1|  471|Drosophila melanogaster GH01941p pro...    29   4.9  
AE014298-2653|AAF48791.2| 1108|Drosophila melanogaster CG15373-P...    29   4.9  
AE013599-2214|AAO41384.1|  471|Drosophila melanogaster CG8445-PB...    29   4.9  
AE013599-2213|AAF58046.1|  471|Drosophila melanogaster CG8445-PA...    29   4.9  

>AY047515-1|AAK77247.1|  471|Drosophila melanogaster GH01941p
           protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +2

Query: 125 LITSTFQIFYRQTNLSEKILYANQGTVFYPQVCYYFLFLQILNNCTYNNL 274
           ++ +T +IF +       I +A Q     P  C     L +L NC  NNL
Sbjct: 102 IVETTAEIFVKDEEAISSIFFAQQ---VVPNSCATHALLSVLLNCNENNL 148


>AE014298-2653|AAF48791.2| 1108|Drosophila melanogaster CG15373-PA
           protein.
          Length = 1108

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = -1

Query: 272 DYCTYSCLKFVKTKNNNILVGRRLFLD*HKEFFQINLSVC 153
           DYC+  CLK  ++ N NIL   +      KE  Q  L  C
Sbjct: 259 DYCSSYCLKHARSANANILRQTKREWRKRKEILQAMLDDC 298


>AE013599-2214|AAO41384.1|  471|Drosophila melanogaster CG8445-PB,
           isoform B protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +2

Query: 125 LITSTFQIFYRQTNLSEKILYANQGTVFYPQVCYYFLFLQILNNCTYNNL 274
           ++ +T +IF +       I +A Q     P  C     L +L NC  NNL
Sbjct: 102 IVETTAEIFVKDEEAISSIFFAQQ---VVPNSCATHALLSVLLNCNENNL 148


>AE013599-2213|AAF58046.1|  471|Drosophila melanogaster CG8445-PA,
           isoform A protein.
          Length = 471

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 15/50 (30%), Positives = 22/50 (44%)
 Frame = +2

Query: 125 LITSTFQIFYRQTNLSEKILYANQGTVFYPQVCYYFLFLQILNNCTYNNL 274
           ++ +T +IF +       I +A Q     P  C     L +L NC  NNL
Sbjct: 102 IVETTAEIFVKDEEAISSIFFAQQ---VVPNSCATHALLSVLLNCNENNL 148


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,314,140
Number of Sequences: 53049
Number of extensions: 349261
Number of successful extensions: 573
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 573
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1887744768
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)