Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0125
         (561 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   1.4  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.4  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   3.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   3.1  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    22   4.1  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   5.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   5.5  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   9.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.6  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 454 HRSHPLPVQTRHAPVLRANPYS 389
           +R HPL + + H  +L  NP S
Sbjct: 332 NRCHPLSLSSDHQAMLHHNPMS 353


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 2.4
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 176 RIPWNSNAQAEKKTLPGPLG 117
           +IPW+ NA+A  K   G  G
Sbjct: 330 QIPWDKNAEALAKWANGQTG 349


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 7   EIRFLFRNPAAEPFQ*SFPRL*KRVFNGVTQSGLKTPPRG 126
           E  F+   P+   F  + P L   + +G + S   TPP G
Sbjct: 57  ETGFINSQPSMAEFMTALPHLSGDMTHGASISPQNTPPAG 96


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +1

Query: 7   EIRFLFRNPAAEPFQ*SFPRL*KRVFNGVTQSGLKTPPRG 126
           E  F+   P+   F  + P L   + +G + S   TPP G
Sbjct: 57  ETGFINSQPSMAEFMTALPHLSGDMTHGASISPQNTPPAG 96


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/20 (45%), Positives = 10/20 (50%)
 Frame = -2

Query: 467 RPDPAPVASASRPNPTRPGP 408
           RP   P A  S+P  T P P
Sbjct: 414 RPPSTPSADGSKPVQTTPKP 433


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +3

Query: 423 RVWTGSGCDRCRVWSMFVRYVRFSELVFY 509
           RVW  +     R+W+    YV+ +E  FY
Sbjct: 536 RVWPRAAAAAERLWTNPSDYVKQTERRFY 564


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 458 PAPVASASRPNPTRPGPQSQ 399
           P+P A A    P  P P+SQ
Sbjct: 263 PSPTAGAGGLPPQVPSPRSQ 282


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 7/22 (31%), Positives = 11/22 (50%)
 Frame = +2

Query: 254 NSGEGCTWRCRAGSYPYPQQVS 319
           N G+G + +C      YP  +S
Sbjct: 616 NEGDGVSVQCTVSKGDYPLNIS 637


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 255 FQGPQRVSGHRRKC 214
           F GP R++   R+C
Sbjct: 602 FHGPHRLAARSRRC 615


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = -1

Query: 255 FQGPQRVSGHRRKC 214
           F GP R++   R+C
Sbjct: 494 FHGPHRLAARSRRC 507


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 432 SKPDTPRSSEP 400
           SKP TP S EP
Sbjct: 227 SKPGTPPSGEP 237


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,041
Number of Sequences: 336
Number of extensions: 3296
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13786212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)