Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0125
         (561 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens ...    31   2.1  
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.                 31   2.8  
AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.     31   2.8  
AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.              31   2.8  
AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.     31   2.8  
BX284632-7|CAI14283.1|  416|Homo sapiens forkhead box D4-like 4 ...    30   4.8  
X79204-1|CAA55793.1|  816|Homo sapiens ataxin-1 protein.               29   8.5  
BC117125-1|AAI17126.1|  815|Homo sapiens ataxin 1 protein.             29   8.5  
AL009031-2|CAA15622.1|  815|Homo sapiens ataxin 1 protein.             29   8.5  
AF343005-1|AAL73342.1|  416|Homo sapiens FOXD4b protein.               29   8.5  

>AK125693-1|BAC86247.1|  321|Homo sapiens protein ( Homo sapiens
           cDNA FLJ43705 fis, clone TESOP2001818. ).
          Length = 321

 Score = 31.5 bits (68), Expect = 2.1
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +3

Query: 18  PIPEPGSGTVSIIVPSSLKTSVQRGNPKWPEDAAER 125
           P+P  G+ T   ++PS+L+ ++  G P W ED+  R
Sbjct: 228 PLPPKGTETFFCVLPSALRAALSCG-PSWGEDSGPR 262


>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
          Length = 4911

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = -1

Query: 285  RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 106
            RH +  P P+F GP+     RR    L  PN + +  D  ++  S +++  S  S   + 
Sbjct: 2589 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 2646

Query: 105  ATLGYPVEHSF 73
             TL +P+   F
Sbjct: 2647 RTLNHPLGGEF 2657


>AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.
          Length = 4025

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = -1

Query: 285  RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 106
            RH +  P P+F GP+     RR    L  PN + +  D  ++  S +++  S  S   + 
Sbjct: 1650 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 1707

Query: 105  ATLGYPVEHSF 73
             TL +P+   F
Sbjct: 1708 RTLNHPLGGEF 1718


>AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.
          Length = 2185

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = -1

Query: 285  RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 106
            RH +  P P+F GP+     RR    L  PN + +  D  ++  S +++  S  S   + 
Sbjct: 1650 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 1707

Query: 105  ATLGYPVEHSF 73
             TL +P+   F
Sbjct: 1708 RTLNHPLGGEF 1718


>AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.
          Length = 3310

 Score = 31.1 bits (67), Expect = 2.8
 Identities = 20/71 (28%), Positives = 33/71 (46%)
 Frame = -1

Query: 285  RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 106
            RH +  P P+F GP+     RR    L  PN + +  D  ++  S +++  S  S   + 
Sbjct: 2034 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 2091

Query: 105  ATLGYPVEHSF 73
             TL +P+   F
Sbjct: 2092 RTLNHPLGGEF 2102


>BX284632-7|CAI14283.1|  416|Homo sapiens forkhead box D4-like 4
           protein.
          Length = 416

 Score = 30.3 bits (65), Expect = 4.8
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 5/64 (7%)
 Frame = -2

Query: 470 HRPDPAPVASASRPNPTRPG--PQSQSLFRSYGSNLPTSLTYIILSTR---GSSPWRPAA 306
           H P P P+  A  P    PG  P +    R Y    P  L Y++LS R   G+      A
Sbjct: 229 HNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSARVYAGAPKKAEGA 288

Query: 305 DMGT 294
           D+ T
Sbjct: 289 DLAT 292


>X79204-1|CAA55793.1|  816|Homo sapiens ataxin-1 protein.
          Length = 816

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = -1

Query: 297 YEPARHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSR 118
           YE +RH+ VHPSP     +  SG R     + +PN  +   D +E++++  +E S  T  
Sbjct: 357 YE-SRHVVVHPSPSDYSSRDPSGVR--ASVMVLPNSNTPAAD-LEVQQATHREASPSTLN 412

Query: 117 RRLQATLGYPVEHSF 73
            +    LG P   S+
Sbjct: 413 DKSGLHLGKPGHRSY 427


>BC117125-1|AAI17126.1|  815|Homo sapiens ataxin 1 protein.
          Length = 815

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = -1

Query: 297 YEPARHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSR 118
           YE +RH+ VHPSP     +  SG R     + +PN  +   D +E++++  +E S  T  
Sbjct: 356 YE-SRHVVVHPSPSDYSSRDPSGVR--ASVMVLPNSNTPAAD-LEVQQATHREASPSTLN 411

Query: 117 RRLQATLGYPVEHSF 73
            +    LG P   S+
Sbjct: 412 DKSGLHLGKPGHRSY 426


>AL009031-2|CAA15622.1|  815|Homo sapiens ataxin 1 protein.
          Length = 815

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 23/75 (30%), Positives = 37/75 (49%)
 Frame = -1

Query: 297 YEPARHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSR 118
           YE +RH+ VHPSP     +  SG R     + +PN  +   D +E++++  +E S  T  
Sbjct: 356 YE-SRHVVVHPSPSDYSSRDPSGVR--ASVMVLPNSNTPAAD-LEVQQATHREASPSTLN 411

Query: 117 RRLQATLGYPVEHSF 73
            +    LG P   S+
Sbjct: 412 DKSGLHLGKPGHRSY 426


>AF343005-1|AAL73342.1|  416|Homo sapiens FOXD4b protein.
          Length = 416

 Score = 29.5 bits (63), Expect = 8.5
 Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
 Frame = -2

Query: 470 HRPDPAPVASASRPNPTRPG--PQSQSLFRSYGSNLPTSLTYIILSTR 333
           H P P P+  A  P    PG  P +    R Y    P  L Y++LS R
Sbjct: 229 HNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAR 276


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,729,811
Number of Sequences: 237096
Number of extensions: 2265270
Number of successful extensions: 12905
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12877
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5646880600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)