Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0125
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 32 0.25
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 32 0.25
Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical ... 29 1.7
U41014-4|AAK32946.3| 557|Caenorhabditis elegans Hypothetical pr... 29 2.3
U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linke... 29 3.0
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 29 3.0
AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-lin... 29 3.0
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 29 3.0
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical... 28 4.0
AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical ... 28 4.0
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 28 4.0
AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical ... 28 4.0
AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical ... 28 4.0
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical... 28 5.3
AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical... 28 5.3
Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical p... 27 7.0
Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical p... 27 7.0
Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical p... 27 7.0
Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical p... 27 7.0
Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical pr... 27 7.0
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 27 7.0
AL034393-10|CAA22323.1| 228|Caenorhabditis elegans Hypothetical... 27 7.0
AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor prote... 27 7.0
U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical pr... 27 9.2
U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12 transcrip... 27 9.2
AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical ... 27 9.2
AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical ... 27 9.2
AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 449 VASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTR-GSSP--WRPAADMGTNR 288
V A P P+ P P ++ +S NLP S+ + R G SP W P A TNR
Sbjct: 405 VVQAPPPVPSNPPPSNEQQSQSRVQNLPDSVRSAVSPRRSGKSPRQWPPPAMPTTNR 461
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 32.3 bits (70), Expect = 0.25
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Frame = -2
Query: 449 VASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTR-GSSP--WRPAADMGTNR 288
V A P P+ P P ++ +S NLP S+ + R G SP W P A TNR
Sbjct: 405 VVQAPPPVPSNPPPSNEQQSQSRVQNLPDSVRSAVSPRRSGKSPRQWPPPAMPTTNR 461
>Z68752-2|CAE54904.1| 912|Caenorhabditis elegans Hypothetical protein
T12G3.2b protein.
Length = 912
Score = 29.9 bits (64), Expect = 1.3
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 2/94 (2%)
Frame = -2
Query: 533 IQFLRPHYIKY*LAKTNITHE--HRPDPAPVASASRPNPTRPGPQSQSLFRSYGSNLPTS 360
+ F+ Y + KT+ ++ H AP A PT P L RS +LP S
Sbjct: 806 LDFINDQYQPGPIRKTSSIYDSSHHIPLAPAPIARNMGPTMISPPPAKLVRSDSDHLPPS 865
Query: 359 LTYIILSTRGSSPWRPAADMGTNRRDISTYIPHL 258
T + +S SP +P + + + + T IPH+
Sbjct: 866 NTMMRVS---CSPPKPPSQLPSPNQ---TTIPHM 893
>AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical
protein Y42H9AR.1 protein.
Length = 506
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 479 THEHRPDPAPVASASRPNPTRPGPQSQS 396
+HEH P PAP A S P P + QS S
Sbjct: 330 SHEHSPSPAP-APVSSPTPVQQYQQSYS 356
>U41014-4|AAK32946.3| 557|Caenorhabditis elegans Hypothetical
protein C06G1.5 protein.
Length = 557
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = -2
Query: 473 EHRPDPAPVASASRPNPTRPGPQSQSLFRSYGSNLP 366
++RP P P SRP P +P + ++ G +P
Sbjct: 114 QYRPTPKPTQVISRPLPPKPQAPKEPIYYPQGKPVP 149
>U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform b protein.
Length = 713
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 501 LTR*NEHNARTSTRPGTGRIRFPSKPDT 418
LT NE+ TS++PG R+ P+K DT
Sbjct: 557 LTVNNENRGETSSQPGRDRLAPPNKTDT 584
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 501 LTR*NEHNARTSTRPGTGRIRFPSKPDT 418
LT NE+ TS++PG R+ P+K DT
Sbjct: 526 LTVNNENRGETSSQPGRDRLAPPNKTDT 553
>AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1a protein.
Length = 713
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 501 LTR*NEHNARTSTRPGTGRIRFPSKPDT 418
LT NE+ TS++PG R+ P+K DT
Sbjct: 557 LTVNNENRGETSSQPGRDRLAPPNKTDT 584
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 28.7 bits (61), Expect = 3.0
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 501 LTR*NEHNARTSTRPGTGRIRFPSKPDT 418
LT NE+ TS++PG R+ P+K DT
Sbjct: 526 LTVNNENRGETSSQPGRDRLAPPNKTDT 553
>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
protein Y105E8A.26b protein.
Length = 1133
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/83 (25%), Positives = 34/83 (40%), Gaps = 7/83 (8%)
Frame = -2
Query: 458 PAPVASASRPNPTRPGPQSQSLFRSYG-------SNLPTSLTYIILSTRGSSPWRPAADM 300
P + S R T P PQ L + +G SN ++L+ + + S+P RP
Sbjct: 760 PGDLPSEMREYSTMPRPQHHQLGQDFGGNRNRQSSNSQSTLSTFVTTASSSNPPRPLLTP 819
Query: 299 GTNRRDISTYIPHLNFKVRREYP 231
+ T PH + V++ P
Sbjct: 820 TRDESASRTTTPHGYYHVKQLSP 842
>AF026205-6|AAM69068.1| 908|Caenorhabditis elegans Hypothetical
protein T23E7.2e protein.
Length = 908
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 518 PHYIKY*LAKTNITHEHRPDPAPVASASRPNPTRPGPQSQS 396
P ++ + KT + E PA S+ P P R PQS S
Sbjct: 554 PEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRRPQSPS 594
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 518 PHYIKY*LAKTNITHEHRPDPAPVASASRPNPTRPGPQSQS 396
P ++ + KT + E PA S+ P P R PQS S
Sbjct: 504 PEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRRPQSPS 544
>AF026205-4|AAD47129.1| 885|Caenorhabditis elegans Hypothetical
protein T23E7.2c protein.
Length = 885
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 518 PHYIKY*LAKTNITHEHRPDPAPVASASRPNPTRPGPQSQS 396
P ++ + KT + E PA S+ P P R PQS S
Sbjct: 554 PEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRRPQSPS 594
>AF026205-3|AAB71257.1| 930|Caenorhabditis elegans Hypothetical
protein T23E7.2a protein.
Length = 930
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 518 PHYIKY*LAKTNITHEHRPDPAPVASASRPNPTRPGPQSQS 396
P ++ + KT + E PA S+ P P R PQS S
Sbjct: 554 PEAVEESIEKTEVVEEESAPPAARQSSPSPPPARRRPQSPS 594
>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
protein Y105E8A.26a protein.
Length = 1172
Score = 27.9 bits (59), Expect = 5.3
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Frame = -2
Query: 458 PAPVASASRPNPTRPGPQSQSLFRSYG-------SNLPTSLTYIILSTRGSSPWRPAADM 300
P + S R T P PQ L + +G SN ++L+ + + S+P RP
Sbjct: 760 PGDLPSEMREYSTMPRPQHHQLGQDFGGNRNRQSSNSQSTLSTFVTTASSSNPPRPLLTP 819
Query: 299 GTNRRDISTYIPHLNFKVRREYPD 228
+ T PH + V++ D
Sbjct: 820 TRDESASRTTTPHGYYHVKQLLDD 843
>AF022971-12|AAG23974.3| 229|Caenorhabditis elegans Hypothetical
protein C31B8.1 protein.
Length = 229
Score = 27.9 bits (59), Expect = 5.3
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -2
Query: 428 NPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSP 321
+P + P +Q LF S+G LP I + SSP
Sbjct: 19 SPFKASPSNQKLFISFGVGLPIFFQMCIFTASYSSP 54
>Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical
protein R11A8.1 protein.
Length = 552
Score = 27.5 bits (58), Expect = 7.0
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = -2
Query: 251 KVRREYPDTAANAVLFA---FRT--ISPFYRIPWNSNAQAEKKTLPGP 123
K+ +E D A N + FR I+PF P+ +N Q + +PGP
Sbjct: 435 KIEKEIADVAENQIRRIEENFRNPFIAPFAFFPYQNNFQMAPQNVPGP 482
>Z50109-13|CAD44092.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 452 PVASASRPN-PTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDIS 276
P +S+S+P P+R S R+ N+ L+ S RG++ S
Sbjct: 704 PTSSSSKPRVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAATSTFGQHSLRSPGYS 763
Query: 275 TYIPHLNFKVRRE 237
+Y PHL+ ++
Sbjct: 764 SYSPHLSVSADKD 776
>Z50109-12|CAD44091.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 452 PVASASRPN-PTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDIS 276
P +S+S+P P+R S R+ N+ L+ S RG++ S
Sbjct: 704 PTSSSSKPRVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAATSTFGQHSLRSPGYS 763
Query: 275 TYIPHLNFKVRRE 237
+Y PHL+ ++
Sbjct: 764 SYSPHLSVSADKD 776
>Z50109-11|CAD91624.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 452 PVASASRPN-PTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDIS 276
P +S+S+P P+R S R+ N+ L+ S RG++ S
Sbjct: 570 PTSSSSKPRVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAATSTFGQHSLRSPGYS 629
Query: 275 TYIPHLNFKVRRE 237
+Y PHL+ ++
Sbjct: 630 SYSPHLSVSADKD 642
>Z50109-10|CAD89729.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 452 PVASASRPN-PTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDIS 276
P +S+S+P P+R S R+ N+ L+ S RG++ S
Sbjct: 704 PTSSSSKPRVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAATSTFGQHSLRSPGYS 763
Query: 275 TYIPHLNFKVRRE 237
+Y PHL+ ++
Sbjct: 764 SYSPHLSVSADKD 776
>Z47810-5|CAD44133.1| 1549|Caenorhabditis elegans Hypothetical
protein F45E10.1b protein.
Length = 1549
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 452 PVASASRPN-PTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDIS 276
P +S+S+P P+R S R+ N+ L+ S RG++ S
Sbjct: 704 PTSSSSKPRVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAATSTFGQHSLRSPGYS 763
Query: 275 TYIPHLNFKVRRE 237
+Y PHL+ ++
Sbjct: 764 SYSPHLSVSADKD 776
>Z47810-4|CAD44132.1| 1583|Caenorhabditis elegans Hypothetical
protein F45E10.1a protein.
Length = 1583
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 452 PVASASRPN-PTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDIS 276
P +S+S+P P+R S R+ N+ L+ S RG++ S
Sbjct: 704 PTSSSSKPRVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAATSTFGQHSLRSPGYS 763
Query: 275 TYIPHLNFKVRRE 237
+Y PHL+ ++
Sbjct: 764 SYSPHLSVSADKD 776
>Z47810-3|CAD91632.1| 1520|Caenorhabditis elegans Hypothetical
protein F45E10.1d protein.
Length = 1520
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 452 PVASASRPN-PTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDIS 276
P +S+S+P P+R S R+ N+ L+ S RG++ S
Sbjct: 570 PTSSSSKPRVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAATSTFGQHSLRSPGYS 629
Query: 275 TYIPHLNFKVRRE 237
+Y PHL+ ++
Sbjct: 630 SYSPHLSVSADKD 642
>Z47810-2|CAD89730.3| 1654|Caenorhabditis elegans Hypothetical
protein F45E10.1c protein.
Length = 1654
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 452 PVASASRPN-PTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDIS 276
P +S+S+P P+R S R+ N+ L+ S RG++ S
Sbjct: 704 PTSSSSKPRVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAATSTFGQHSLRSPGYS 763
Query: 275 TYIPHLNFKVRRE 237
+Y PHL+ ++
Sbjct: 764 SYSPHLSVSADKD 776
>Z47810-1|CAD91631.1| 1234|Caenorhabditis elegans Hypothetical
protein F45E10.1e protein.
Length = 1234
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 452 PVASASRPN-PTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDIS 276
P +S+S+P P+R S R+ N+ L+ S RG++ S
Sbjct: 284 PTSSSSKPRVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAATSTFGQHSLRSPGYS 343
Query: 275 TYIPHLNFKVRRE 237
+Y PHL+ ++
Sbjct: 344 SYSPHLSVSADKD 356
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 27.5 bits (58), Expect = 7.0
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 235 IRTPPQMRCSSRSEPYLPSIGFHGT 161
I T Q + SS +P+LP++GF GT
Sbjct: 299 IVTISQGKASSLYDPHLPTVGFDGT 323
>AL034393-10|CAA22323.1| 228|Caenorhabditis elegans Hypothetical
protein Y18D10A.12 protein.
Length = 228
Score = 27.5 bits (58), Expect = 7.0
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = -2
Query: 476 HEHRPDPAPVASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSS 324
H RP +P RP P +P P+ +S + SY TS + ++ S
Sbjct: 44 HHGRPPHSP--RPPRPQPVQPRPECESGWTSYNRPQGTSCIKVFYASTSQS 92
>AF504312-1|AAM22693.1| 1583|Caenorhabditis elegans adaptor protein
UNC-53 protein.
Length = 1583
Score = 27.5 bits (58), Expect = 7.0
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -2
Query: 452 PVASASRPN-PTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTNRRDIS 276
P +S+S+P P+R S R+ N+ L+ S RG++ S
Sbjct: 704 PTSSSSKPRVPSRSSTSVDSRSRAEQENVYKLLSQCRTSQRGAAATSTFGQHSLRSPGYS 763
Query: 275 TYIPHLNFKVRRE 237
+Y PHL+ ++
Sbjct: 764 SYSPHLSVSADKD 776
>U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical
protein B0507.3 protein.
Length = 432
Score = 27.1 bits (57), Expect = 9.2
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -1
Query: 459 PGTGRIRFPSKPDTPRSSEPILIPKLRI 376
P ++ SKP TP + P+L+P++ +
Sbjct: 324 PNPAMVQKSSKPSTPIPAPPVLVPQVEL 351
>U08022-1|AAA17722.1| 515|Caenorhabditis elegans STE12
transcriptional activator protein.
Length = 515
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKT---SVQRGNPKWPEDAAERS 128
P P PE SGT + S + T +V + PEDAAE S
Sbjct: 355 PTPAPEAASGTAD-VTASPINTAFPAVVTSSTPMPEDAAEVS 395
>AL110501-6|CAH19094.1| 466|Caenorhabditis elegans Hypothetical
protein Y79H2A.1b protein.
Length = 466
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKT---SVQRGNPKWPEDAAERS 128
P P PE SGT + S + T +V + PEDAAE S
Sbjct: 306 PTPAPEAASGTAD-VTASPINTAFPAVVTSSTPMPEDAAEVS 346
>AL110501-5|CAB54505.1| 552|Caenorhabditis elegans Hypothetical
protein Y79H2A.1a protein.
Length = 552
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKT---SVQRGNPKWPEDAAERS 128
P P PE SGT + S + T +V + PEDAAE S
Sbjct: 392 PTPAPEAASGTAD-VTASPINTAFPAVVTSSTPMPEDAAEVS 432
>AC006620-3|AAF39779.2| 579|Caenorhabditis elegans Hypothetical
protein C51G7.4 protein.
Length = 579
Score = 27.1 bits (57), Expect = 9.2
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 3/42 (7%)
Frame = +3
Query: 12 PVPIPEPGSGTVSIIVPSSLKT---SVQRGNPKWPEDAAERS 128
P P PE SGT + S + T +V + PEDAAE S
Sbjct: 419 PTPAPEAASGTAD-VTASPINTAFPAVVTSSTPMPEDAAEVS 459
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,104,164
Number of Sequences: 27780
Number of extensions: 327554
Number of successful extensions: 1390
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1388
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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