Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0122
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   3.0  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   7.0  
EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein A...    23   9.2  
AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine dehydroge...    23   9.2  

>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 236 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 141
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 475 PLNGGRTESCRSRTKRNR 422
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


>EF427621-5|ABO09853.1|   62|Anopheles gambiae tal-like protein AA
           protein.
          Length = 62

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 250 RPGTGASASRPNPTRPGPQSQ 188
           RPG+GAS+S+ +P     Q Q
Sbjct: 13  RPGSGASSSQRSPFHHHHQQQ 33


>AF515734-1|AAO14865.1| 1325|Anopheles gambiae xanthine
           dehydrogenase protein.
          Length = 1325

 Score = 23.0 bits (47), Expect = 9.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +2

Query: 173 TSE*GLALRTGACRVWTGSGCAGAGSGHV 259
           T E  L +    CR   G+GC   G+G +
Sbjct: 151 TKEFALRMGDKCCRNGNGNGCGQNGNGEL 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 790,524
Number of Sequences: 2352
Number of extensions: 18255
Number of successful extensions: 38
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)