Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0121
(601 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0630 - 20097672-20097772,20097983-20102012 33 0.13
10_08_0929 + 21633179-21633377,21633466-21633809,21633905-21634297 31 0.53
10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111 31 0.53
02_02_0346 - 9214365-9214583,9214830-9214919,9215012-9215177,921... 31 0.70
06_01_0350 + 2534422-2535615 31 0.93
01_06_0090 + 26358051-26359157,26359582-26359701,26359968-263600... 31 0.93
02_05_1170 + 34663853-34663928,34664038-34664078,34664317-346643... 30 1.6
12_01_0796 + 7292523-7292783,7292963-7293018,7295274-7295331,729... 29 2.2
08_01_0578 + 5139324-5140190 29 2.2
05_03_0459 - 14284513-14286336 29 2.8
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309... 29 2.8
01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853 29 2.8
06_01_0268 + 1989069-1989293,1989938-1990020,1990136-1990357,199... 29 3.8
02_05_0377 + 28408751-28409113,28409545-28410129,28411212-28411385 29 3.8
11_08_0032 - 27807489-27807497,27807641-27807684,27808046-278081... 28 5.0
11_06_0062 + 19709801-19710832,19712383-19712568,19712661-197128... 28 5.0
12_02_0877 - 23946449-23948284 28 6.6
05_04_0145 - 18391112-18392461,18392545-18392637 28 6.6
01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305 28 6.6
06_01_0368 + 2645007-2645317,2645422-2645509,2648927-2649183,264... 27 8.7
05_01_0362 - 2832100-2832123,2832566-2832596,2832805-2833541,283... 27 8.7
03_05_0565 + 25667391-25667696 27 8.7
03_03_0230 - 15623648-15623653,15624333-15624383,15624477-156245... 27 8.7
01_01_0012 + 71903-72935,73468-73981,74619-76008 27 8.7
>07_03_0630 - 20097672-20097772,20097983-20102012
Length = 1376
Score = 33.5 bits (73), Expect = 0.13
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 1/92 (1%)
Frame = -1
Query: 328 RLPLPTLFYRLEALHLGDLLRIWVRPARHLHVHPSPEFSRSAESIRTPPQMRCS-SRSEP 152
+L +P + E LH D+ + W + A + HP E S E IR P + R+
Sbjct: 202 KLHVPHKGWITETLHKIDMSK-WTQQAIEVSPHPENEKSNKVEYIRHPHDSAVTYLRNPA 260
Query: 151 YLPSIGFHGTRTLRQKRKLFPDLSAASSGHFG 56
+P +G G + +F D + HFG
Sbjct: 261 VIPIVGISGVGKSALAKFIFDDANVRE--HFG 290
>10_08_0929 + 21633179-21633377,21633466-21633809,21633905-21634297
Length = 311
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/24 (54%), Positives = 18/24 (75%)
Frame = -3
Query: 440 NARTSTRPGTGASASRPNPTRPGP 369
+A T+TR +GA+ +RP PTRP P
Sbjct: 279 SAATTTRNNSGAAPARPVPTRPWP 302
>10_08_0313 - 16677849-16679060,16679158-16679244,16679749-16680111
Length = 553
Score = 31.5 bits (68), Expect = 0.53
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Frame = -1
Query: 286 HLGDLLRIWVRPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRT-LR 110
HL +++ + RH V SP R+ + RT P R + R PSI +RT +
Sbjct: 240 HLANVVNQGLTQTRHTSVRVSPSVGRTVSATRTTPATR-AGRGMSNAPSIQIPQSRTRFK 298
Query: 109 QKRKLFPDLSAASSGHFG 56
+ P + + FG
Sbjct: 299 RVGATSPGIVTLNDNQFG 316
>02_02_0346 -
9214365-9214583,9214830-9214919,9215012-9215177,
9215601-9215911,9215944-9216566,9216779-9216968,
9217096-9217197,9217285-9217425,9217815-9218411,
9219126-9219286,9220709-9220824,9221538-9221654,
9221746-9221808,9221879-9221949
Length = 988
Score = 31.1 bits (67), Expect = 0.70
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 7/79 (8%)
Frame = -1
Query: 229 PSPEFSRSA-ESIRTPPQM------RCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAAS 71
P P+ SRS ES R P S + + GFHG L+ KL PDL +
Sbjct: 168 PPPKRSRSKQESSRASPMKLIKLYPHMSGEQKRLIEGAGFHGLVDLKCS-KLRPDLCSWL 226
Query: 70 SGHFGLPRRTLVFKDEGTI 14
HF LVF G I
Sbjct: 227 MEHFNPATNQLVFPGRGAI 245
>06_01_0350 + 2534422-2535615
Length = 397
Score = 30.7 bits (66), Expect = 0.93
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -3
Query: 131 PWNSNAQAEKKTLPGPLGGVFRP 63
PW S+A+ E+K LP PL +F P
Sbjct: 42 PWRSSARLERKLLPPPLPWLFLP 64
>01_06_0090 +
26358051-26359157,26359582-26359701,26359968-26360099,
26360194-26360375,26360488-26360602,26362001-26362135,
26362261-26362395
Length = 641
Score = 30.7 bits (66), Expect = 0.93
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -3
Query: 443 HNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTS 321
H RT PG G+S+ P P ++ S RS G + P S
Sbjct: 15 HVGRTPETPGRGSSSGSPAPGGSASKAVSFARSLGVHFPRS 55
>02_05_1170 +
34663853-34663928,34664038-34664078,34664317-34664386,
34664499-34664647,34664784-34664879,34665406-34665476,
34665637-34665698,34665778-34665841,34665950-34666034,
34666129-34666255,34666381-34666454,34666539-34666599,
34666683-34666771,34666897-34667206,34667763-34667815,
34668299-34668370,34668648-34668914,34669015-34669047,
34669163-34669245,34669522-34669594,34669834-34670170,
34670302-34670633,34670816-34671135,34671261-34671612,
34671691-34671906
Length = 1170
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/65 (30%), Positives = 32/65 (49%)
Frame = -3
Query: 434 RTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGT 255
RTS+R G+ + + + +RPG + + + Y TS + +R SS R +G
Sbjct: 371 RTSSRTGSASRRAVASSSRPGSSVEPMEQQYSR---TSRLFSSSGSRPSSTQRVNPSVGE 427
Query: 254 TGATS 240
T ATS
Sbjct: 428 TRATS 432
>12_01_0796 +
7292523-7292783,7292963-7293018,7295274-7295331,
7295777-7295843,7296461-7296516,7296638-7296691,
7296836-7296961
Length = 225
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -1
Query: 406 HPLPVQTRHAPVLRANPYSEVTDPICRLPL 317
H L + RH P L+A P S + C+LPL
Sbjct: 107 HSLIIPKRHFPSLQATPPSVIAAICCKLPL 136
>08_01_0578 + 5139324-5140190
Length = 288
Score = 29.5 bits (63), Expect = 2.2
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -3
Query: 428 STRPGTGASASRPNPTRPGP-QSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTT 252
ST P T + S P P+R GP + +S + L S +LS+ +S AAD
Sbjct: 15 STTPATSTALSTPPPSRAGPDELRSTWAHRAWTLAGSAA--VLSSLSTSATLAAADADAN 72
Query: 251 GATS 240
GA +
Sbjct: 73 GAAA 76
>05_03_0459 - 14284513-14286336
Length = 607
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/75 (25%), Positives = 33/75 (44%)
Frame = -3
Query: 449 NEHNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPA 270
+E N S+RP T A +P + + + S P + +++ R +SP
Sbjct: 441 SERNDSASSRPDTTADHPTEAEVKPMEEQKLIIERAAS--PHTEMQELITERAASPHTEM 498
Query: 269 ADMGTTGATSPRTSL 225
++ T A SPRT +
Sbjct: 499 QELITERAASPRTEM 513
>03_04_0090 +
17228253-17228403,17229062-17229129,17229238-17230902,
17231002-17231143,17231648-17232399
Length = 925
Score = 29.1 bits (62), Expect = 2.8
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 406 HPLPVQTRHAPVLRANP 356
H +PVQ H+PVL+ NP
Sbjct: 340 HSVPVQKNHSPVLKTNP 356
>01_04_0113 - 16133794-16134933,16135030-16135611,16135698-16135853
Length = 625
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/62 (32%), Positives = 26/62 (41%), Gaps = 1/62 (1%)
Frame = -1
Query: 319 LPTLFYRLEALHLGDLLRIWVRPARHLHVHPSPEFSRSAES-IRTPPQMRCSSRSEPYLP 143
+P+L +E HL V P+ H P P+ S R PP R S RSE P
Sbjct: 12 MPSLLADVEVSHLAGFD---VTPSPHAEPSPRPQLRHDNPSRSRVPPLERVSRRSEVVFP 68
Query: 142 SI 137
+
Sbjct: 69 PL 70
>06_01_0268 +
1989069-1989293,1989938-1990020,1990136-1990357,
1990434-1990621,1990711-1990835,1990988-1991039,
1991585-1991874,1992229-1992307,1992527-1992657
Length = 464
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = -1
Query: 400 LPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEAL 287
+P Q + A + A+P + V C LP P+LF L L
Sbjct: 292 IPYQFQEATSILASPLAHVPASSCPLPAPSLFSSLPLL 329
>02_05_0377 + 28408751-28409113,28409545-28410129,28411212-28411385
Length = 373
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/72 (29%), Positives = 29/72 (40%)
Frame = -3
Query: 488 FLRPHYIKILTR*NEHNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYI 309
F P Y+ + + T+ ASAS +P QS RS +++ SL
Sbjct: 209 FAYPQYVWCHSPRDSTTTTTAASASASASASSSSPATVAAALQSEHRSGLADIEVSLVET 268
Query: 308 ILSTRGSSPWRP 273
S R SP RP
Sbjct: 269 HASVRVMSPRRP 280
>11_08_0032 -
27807489-27807497,27807641-27807684,27808046-27808168,
27810770-27810983,27811382-27811530,27811719-27812618,
27812964-27814659
Length = 1044
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 428 STRPGTGASASRPNPTRPGPQSQSLFRSY 342
+TRPG A+ N T GPQ +FR +
Sbjct: 904 TTRPGKKLMATTANRTSKGPQDNRVFREH 932
>11_06_0062 +
19709801-19710832,19712383-19712568,19712661-19712867,
19712940-19713078,19713172-19713380,19713520-19714134
Length = 795
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/53 (30%), Positives = 23/53 (43%)
Frame = -1
Query: 280 GDLLRIWVRPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGT 122
G+ +R W RP + V SP + PP + + E L G+HGT
Sbjct: 18 GEKVRRWTRPKKG-SVSRSPHYPCPGGEEEPPPPLAPGTDVEVRLDGDGYHGT 69
>12_02_0877 - 23946449-23948284
Length = 611
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -3
Query: 428 STRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSL 318
ST + ASA RP PT P + L + ++LP L
Sbjct: 4 STAASSSASAVRPPPTWGAPSQRRLVEQHLASLPRGL 40
>05_04_0145 - 18391112-18392461,18392545-18392637
Length = 480
Score = 27.9 bits (59), Expect = 6.6
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 433 EHRPDPAPAHPLPVQTRHAPVLRANPYS 350
+H AP+ P P + RHAP A YS
Sbjct: 42 DHGSSNAPSPPTPRRARHAPATTAVTYS 69
>01_06_0254 + 27915608-27915755,27915837-27916042,27917069-27917305
Length = 196
Score = 27.9 bits (59), Expect = 6.6
Identities = 16/45 (35%), Positives = 20/45 (44%)
Frame = -3
Query: 404 SASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPA 270
SAS P+P +P P S SL R+ S +Y G W A
Sbjct: 15 SASLPSPAQPAPASLSL-RAVSPRARLSASYAAFPIGGIGAWAAA 58
>06_01_0368 +
2645007-2645317,2645422-2645509,2648927-2649183,
2649453-2649504,2649527-2649838
Length = 339
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 422 RP-GTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTTGA 246
RP G +A P PT P P+ S+ SY + +L Y++L+ G+S P D T +
Sbjct: 199 RPTGPRPAAHVPRPTPPSPRKVSVSGSY---VGLAL-YVVLAAAGTSSRGPPLDHAGTSS 254
>05_01_0362 -
2832100-2832123,2832566-2832596,2832805-2833541,
2834333-2834825,2835762-2835770,2838062-2838561
Length = 597
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = -1
Query: 421 DPAPAHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLE 293
DP + PL PV + Y + P CR+ + +LF +E
Sbjct: 551 DPGRSCPLDSLPDETPVEKLYVYRTIAGPRCRMKIHSLFQDME 593
>03_05_0565 + 25667391-25667696
Length = 101
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -1
Query: 268 RIWVRPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGT 122
RI++ A H H SP +R A++ S+ +EP P HGT
Sbjct: 40 RIFMADAAHPPRHRSPPLARRADAASPRRSCSGSASAEPQAPVEEPHGT 88
>03_03_0230 -
15623648-15623653,15624333-15624383,15624477-15624546,
15624646-15624848,15625011-15625116,15625228-15625295,
15625410-15625453,15628360-15628602,15629482-15629691,
15630207-15630287,15630289-15630355,15632167-15632386,
15632534-15632646,15634322-15634416,15634509-15634629
Length = 565
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -3
Query: 575 KIRGRPENAGPDPVRNVRRFSRGHIK 498
++RGRPE AG D + + R HIK
Sbjct: 311 QLRGRPERAGDDGLAGGQGRRRAHIK 336
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = -1
Query: 256 RPARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSI 137
+ AR PSP RS R+P + R S RS Y P +
Sbjct: 509 KDARGKSRSPSPSARRSKSRSRSPIKYRRSRRSRSYSPPV 548
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,980,444
Number of Sequences: 37544
Number of extensions: 419402
Number of successful extensions: 1780
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1778
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1435654836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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