Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0121
(601 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL031133-3|CAM28211.1| 353|Homo sapiens zinc finger CCCH-type c... 33 1.0
DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial l... 32 1.8
EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3 pr... 31 2.3
AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively sp... 31 2.3
AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein. 31 2.3
BC101271-1|AAI01272.1| 441|Homo sapiens TUBB8 protein protein. 31 4.1
BC101270-1|AAI01271.1| 441|Homo sapiens TUBB8 protein protein. 31 4.1
BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein LO... 31 4.1
BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein LO... 31 4.1
AL713922-4|CAI16221.1| 435|Homo sapiens novel protein similar t... 31 4.1
AL713922-3|CAI16220.1| 410|Homo sapiens novel protein similar t... 31 4.1
AK096458-1|BAC04796.1| 410|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF464873-1|AAL69964.1| 1106|Homo sapiens myoneurin protein. 31 4.1
AF355127-1|AAL32434.1| 444|Homo sapiens beta-tubulin 4Q protein. 31 4.1
AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein. 31 4.1
AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein. 31 4.1
BC110813-1|AAI10814.1| 519|Homo sapiens cAMP responsive element... 30 5.4
AJ549387-1|CAD79347.1| 519|Homo sapiens basic transcription fac... 30 5.4
AJ549092-1|CAD79342.1| 519|Homo sapiens basic transcription fac... 30 5.4
AJ488947-1|CAD35759.1| 855|Homo sapiens polyserase-IB protein p... 30 5.4
AJ488946-1|CAD35758.1| 1059|Homo sapiens polyserase-IA protein p... 30 5.4
AK131517-1|BAD18659.1| 460|Homo sapiens protein ( Homo sapiens ... 30 7.1
AK123968-1|BAC85736.1| 132|Homo sapiens protein ( Homo sapiens ... 30 7.1
BC108289-1|AAI08290.1| 423|Homo sapiens PCLO protein protein. 29 9.4
BC009062-1|AAH09062.1| 198|Homo sapiens Unknown (protein for IM... 29 9.4
BC001304-1|AAH01304.2| 356|Homo sapiens PCLO protein protein. 29 9.4
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 29 9.4
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 29 9.4
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 29 9.4
AB011131-1|BAA25485.1| 1212|Homo sapiens KIAA0559 protein protein. 29 9.4
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 29 9.4
>AL031133-3|CAM28211.1| 353|Homo sapiens zinc finger CCCH-type
containing 12D protein.
Length = 353
Score = 32.7 bits (71), Expect = 1.0
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -3
Query: 482 RPHYIKILTR*NEHNARTSTRPGTGASASRPNPTRPG 372
RPH+ ++ +E A+T RPG GA RP P PG
Sbjct: 279 RPHHAQLAVA-DELRAKTGARPGAGAEEQRP-PRAPG 313
>DQ009660-1|AAY26234.1| 1836|Homo sapiens expressed in synovial lining
protein protein.
Length = 1836
Score = 31.9 bits (69), Expect = 1.8
Identities = 31/115 (26%), Positives = 42/115 (36%)
Frame = -3
Query: 422 RPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTTGAT 243
R G+ A RP P PG ++ S LP + G+ PW TT A
Sbjct: 1181 RGGSLAPVKRPLPPPPGSSPRA--SHVPSRLPPRSAATVSPVAGTHPW----PQYTTRAP 1234
Query: 242 SPRTSLT*IFKVRREYPDTAANAVLFAFRTISPFYRIPWNSNAQAEKKTLPGPLG 78
S T + +R+ L + + P YR +N E K LPG G
Sbjct: 1235 PGHFSTTPMLSLRQRMMHARFRNPL-SRQPARPSYRQGYNGRPNVEGKVLPGSNG 1288
>EF179181-1|ABN05284.1| 727|Homo sapiens LIM domain binding 3
protein.
Length = 727
Score = 31.5 bits (68), Expect = 2.3
Identities = 36/136 (26%), Positives = 51/136 (37%), Gaps = 1/136 (0%)
Frame = -1
Query: 430 HRPDPA-PAHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVR 254
H+ DPA + V +P RA+P + T P R F R A
Sbjct: 105 HQKDPALDTNGSLVAPSPSPEARASPGTPGT-PELRPTFSPAFSRPSAFSSLAEASDPGP 163
Query: 253 PARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAA 74
P L SPE A + P + SS+ Y IG + TLR+ +++
Sbjct: 164 PRASLRAKTSPE---GARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRG 220
Query: 73 SSGHFGLPRRTLVFKD 26
+ GLP +L KD
Sbjct: 221 KASGVGLPGGSLPIKD 236
>AF276807-1|AAQ14316.1| 330|Homo sapiens Z-band alternatively
spliced PDZ-motif protein ZASP-4 protein.
Length = 330
Score = 31.5 bits (68), Expect = 2.3
Identities = 36/136 (26%), Positives = 51/136 (37%), Gaps = 1/136 (0%)
Frame = -1
Query: 430 HRPDPA-PAHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVR 254
H+ DPA + V +P RA+P + T P R F R A
Sbjct: 105 HQKDPALDTNGSLVAPSPSPEARASPGTPGT-PELRPTFSPAFSRPSAFSSLAEASDPGP 163
Query: 253 PARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAA 74
P L SPE A + P + SS+ Y IG + TLR+ +++
Sbjct: 164 PRASLRAKTSPE---GARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRG 220
Query: 73 SSGHFGLPRRTLVFKD 26
+ GLP +L KD
Sbjct: 221 KASGVGLPGGSLPIKD 236
>AB014513-1|BAA31588.1| 734|Homo sapiens KIAA0613 protein protein.
Length = 734
Score = 31.5 bits (68), Expect = 2.3
Identities = 36/136 (26%), Positives = 51/136 (37%), Gaps = 1/136 (0%)
Frame = -1
Query: 430 HRPDPA-PAHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVR 254
H+ DPA + V +P RA+P + T P R F R A
Sbjct: 112 HQKDPALDTNGSLVAPSPSPEARASPGTPGT-PELRPTFSPAFSRPSAFSSLAEASDPGP 170
Query: 253 PARHLHVHPSPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAA 74
P L SPE A + P + SS+ Y IG + TLR+ +++
Sbjct: 171 PRASLRAKTSPE---GARDLLGPKALPGSSQPRQYNNPIGLYSAETLREMAQMYQMSLRG 227
Query: 73 SSGHFGLPRRTLVFKD 26
+ GLP +L KD
Sbjct: 228 KASGVGLPGGSLPIKD 243
>BC101271-1|AAI01272.1| 441|Homo sapiens TUBB8 protein protein.
Length = 441
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 474 MRPQKLYIFNMTSRKSSYVSDWIRTRVLRPSADLPSR 584
MR +FN+ + SSY +DW+ V D+P R
Sbjct: 320 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPR 356
>BC101270-1|AAI01271.1| 441|Homo sapiens TUBB8 protein protein.
Length = 441
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 474 MRPQKLYIFNMTSRKSSYVSDWIRTRVLRPSADLPSR 584
MR +FN+ + SSY +DW+ V D+P R
Sbjct: 320 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPR 356
>BC093754-1|AAH93754.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.1
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 114 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 245
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>BC093752-1|AAH93752.1| 587|Homo sapiens hypothetical protein
LOC51057 protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.1
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 114 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 245
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AL713922-4|CAI16221.1| 435|Homo sapiens novel protein similar to
beta-tubulin 4Q (TUBB4Q)kinase) II gamma protein.
Length = 435
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 474 MRPQKLYIFNMTSRKSSYVSDWIRTRVLRPSADLPSR 584
MR +FN+ + SSY +DW+ V D+P R
Sbjct: 323 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPR 359
>AL713922-3|CAI16220.1| 410|Homo sapiens novel protein similar to
beta-tubulin 4Q (TUBB4Q)kinase) II gamma protein.
Length = 410
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 474 MRPQKLYIFNMTSRKSSYVSDWIRTRVLRPSADLPSR 584
MR +FN+ + SSY +DW+ V D+P R
Sbjct: 289 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPR 325
>AK096458-1|BAC04796.1| 410|Homo sapiens protein ( Homo sapiens
cDNA FLJ39139 fis, clone NTONG2009229. ).
Length = 410
Score = 30.7 bits (66), Expect = 4.1
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 482 RPHYIKILTR*NEHNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIIL 303
RP YI+ L + + A+T P T P+ + GPQSQ ++ +NL LT I
Sbjct: 7 RPSYIRSLRKAEKRGAKT---PSTNVKPKTPHQRKGGPQSQLCDKA--ANLIEELTSIFK 61
Query: 302 STR 294
+ +
Sbjct: 62 AAK 64
>AF464873-1|AAL69964.1| 1106|Homo sapiens myoneurin protein.
Length = 1106
Score = 30.7 bits (66), Expect = 4.1
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = -3
Query: 482 RPHYIKILTR*NEHNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIIL 303
RP YI+ L + + A+T P T P+ + GPQSQ ++ +NL LT I
Sbjct: 130 RPSYIRSLRKAEKRGAKT---PSTNVKPKTPHQRKGGPQSQLCDKA--ANLIEELTSIFK 184
Query: 302 STR 294
+ +
Sbjct: 185 AAK 187
>AF355127-1|AAL32434.1| 444|Homo sapiens beta-tubulin 4Q protein.
Length = 444
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 474 MRPQKLYIFNMTSRKSSYVSDWIRTRVLRPSADLPSR 584
MR +FN+ + SSY +DW+ V D+P R
Sbjct: 323 MREVDEQMFNIQDKNSSYFADWLPNNVKTAVCDIPPR 359
>AF131737-1|AAD20026.1| 587|Homo sapiens Unknown protein.
Length = 587
Score = 30.7 bits (66), Expect = 4.1
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 114 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 245
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>AC079353-1|AAY24034.1| 423|Homo sapiens unknown protein.
Length = 423
Score = 30.7 bits (66), Expect = 4.1
Identities = 12/44 (27%), Positives = 25/44 (56%)
Frame = +3
Query: 114 SVRVPWNPIEGRYGSEREEHRICGGVRILSADLENSGEGCTWRC 245
SVR W+P++ R+G+ ++ +++ +S D E + C + C
Sbjct: 120 SVRTEWDPLDVRFGT-KQPYQVFTVEHSVSVDKEPMADSCIYEC 162
>BC110813-1|AAI10814.1| 519|Homo sapiens cAMP responsive element
binding protein 3-like 2 protein.
Length = 519
Score = 30.3 bits (65), Expect = 5.4
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = -1
Query: 442 ITHEHRPDPAPAHPLPVQTRHAPVLRANPYSEVT---DPICRLPLPTLFYRLEALHLGDL 272
IT E P P+ L + P+ + P E+ D C+ +P + +LE +
Sbjct: 129 ITDEPPPGLVPSVTLTITAISTPLEKEEPPLEMNTGVDSSCQTIIPKI--KLEPHEVDQF 186
Query: 271 LRIWVR--PARHLHVHPSPEFSRSAE---SIRTPPQMRCSSRSEPYLPS 140
L + P HLH+ P+P S ++ S+ P++ S + + PS
Sbjct: 187 LNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPS 235
>AJ549387-1|CAD79347.1| 519|Homo sapiens basic transcription factor
2 homologue protein.
Length = 519
Score = 30.3 bits (65), Expect = 5.4
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = -1
Query: 442 ITHEHRPDPAPAHPLPVQTRHAPVLRANPYSEVT---DPICRLPLPTLFYRLEALHLGDL 272
IT E P P+ L + P+ + P E+ D C+ +P + +LE +
Sbjct: 129 ITDEPPPGLVPSVTLTITAISTPLEKEEPPLEMNTGVDSSCQTIIPKI--KLEPHEVDQF 186
Query: 271 LRIWVR--PARHLHVHPSPEFSRSAE---SIRTPPQMRCSSRSEPYLPS 140
L + P HLH+ P+P S ++ S+ P++ S + + PS
Sbjct: 187 LNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPS 235
>AJ549092-1|CAD79342.1| 519|Homo sapiens basic transcription factor
2 homologue protein.
Length = 519
Score = 30.3 bits (65), Expect = 5.4
Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = -1
Query: 442 ITHEHRPDPAPAHPLPVQTRHAPVLRANPYSEVT---DPICRLPLPTLFYRLEALHLGDL 272
IT E P P+ L + P+ + P E+ D C+ +P + +LE +
Sbjct: 129 ITDEPPPGLVPSVTLTITAISTPLEKEEPPLEMNTGVDSSCQTIIPKI--KLEPHEVDQF 186
Query: 271 LRIWVR--PARHLHVHPSPEFSRSAE---SIRTPPQMRCSSRSEPYLPS 140
L + P HLH+ P+P S ++ S+ P++ S + + PS
Sbjct: 187 LNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPS 235
>AJ488947-1|CAD35759.1| 855|Homo sapiens polyserase-IB protein
protein.
Length = 855
Score = 30.3 bits (65), Expect = 5.4
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = -3
Query: 437 ARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMG 258
A TS R G + P+RP P + S R G ++L+ + + RG +P+ P A
Sbjct: 752 ATTSPRTTAGLTVPGATPSRPTPGAAS--RVTGQPANSTLSAVSTTARGQTPF-PDAPEA 808
Query: 257 TTGATSPRTSL 225
TT P L
Sbjct: 809 TTHTQLPDCGL 819
>AJ488946-1|CAD35758.1| 1059|Homo sapiens polyserase-IA protein
protein.
Length = 1059
Score = 30.3 bits (65), Expect = 5.4
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = -3
Query: 437 ARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMG 258
A TS R G + P+RP P + S R G ++L+ + + RG +P+ P A
Sbjct: 752 ATTSPRTTAGLTVPGATPSRPTPGAAS--RVTGQPANSTLSAVSTTARGQTPF-PDAPEA 808
Query: 257 TTGATSPRTSL 225
TT P L
Sbjct: 809 TTHTQLPDCGL 819
>AK131517-1|BAD18659.1| 460|Homo sapiens protein ( Homo sapiens
cDNA FLJ16743 fis, clone CTONG2003348, moderately
similar to Mus musculus mRNA for OASIS protein. ).
Length = 460
Score = 29.9 bits (64), Expect = 7.1
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Frame = -1
Query: 442 ITHEHRPDPAPAHPLPVQTRHAPVLRANPYSEVT---DPICRLPLPTLFYRLEALHLGDL 272
+T E P P+ L + P+ + P E+ D C+ +P + +LE +
Sbjct: 130 VTDEPPPGLVPSVTLTITAISTPLEKEEPPLEMNTGVDSSCQTIIPKI--KLEPHEVDQF 187
Query: 271 LRIWVR--PARHLHVHPSPEFSRSAE---SIRTPPQMRCSSRSEPYLPS 140
L + P HLH+ P+P S ++ S+ P++ S + + PS
Sbjct: 188 LNFSPKEAPVDHLHLPPTPPSSHGSDSEGSLSPNPRLHPFSLPQTHSPS 236
>AK123968-1|BAC85736.1| 132|Homo sapiens protein ( Homo sapiens
cDNA FLJ41974 fis, clone SKNMC2005772. ).
Length = 132
Score = 29.9 bits (64), Expect = 7.1
Identities = 22/70 (31%), Positives = 29/70 (41%)
Frame = -3
Query: 434 RTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGT 255
R P T +A P + PGPQ+ +RS GS LT + S + P A G
Sbjct: 14 RGMAAPPTEGAAVTP-ASSPGPQASLAWRSSGSRPCCPLTASLTSPWRNQPLHTAPSGGG 72
Query: 254 TGATSPRTSL 225
T P S+
Sbjct: 73 CCVTGPACSI 82
>BC108289-1|AAI08290.1| 423|Homo sapiens PCLO protein protein.
Length = 423
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 446 EHNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYII 306
E + + P + S+S P+P +PG S S + +GS+ PT T ++
Sbjct: 142 EKGSHVHSGPTSAGSSSVPSPGQPGSPSVSK-KKHGSSKPTDGTKVV 187
>BC009062-1|AAH09062.1| 198|Homo sapiens Unknown (protein for
IMAGE:3875076) protein.
Length = 198
Score = 29.5 bits (63), Expect = 9.4
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -3
Query: 596 PTRLTARKIR-GRPENAGPDPVRNVRRFSRGHIKYIQFLRPHYIKILTR*NEHNARTSTR 420
PT +R GRP P P + RR S + + ++ +S+
Sbjct: 28 PTPAPKEAVREGRPPE--PTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 85
Query: 419 PGTGASASRPNPTRPGPQS 363
+ +S+S P+P +PGPQ+
Sbjct: 86 SSSSSSSSSPSPAKPGPQA 104
>BC001304-1|AAH01304.2| 356|Homo sapiens PCLO protein protein.
Length = 356
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 446 EHNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYII 306
E + + P + S+S P+P +PG S S + +GS+ PT T ++
Sbjct: 75 EKGSHVHSGPTSAGSSSVPSPGQPGSPSVSK-KKHGSSKPTDGTKVV 120
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 29.5 bits (63), Expect = 9.4
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -3
Query: 596 PTRLTARKIR-GRPENAGPDPVRNVRRFSRGHIKYIQFLRPHYIKILTR*NEHNARTSTR 420
PT +R GRP P P + RR S + + ++ +S+
Sbjct: 1614 PTPAPKEAVREGRPPE--PTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 1671
Query: 419 PGTGASASRPNPTRPGPQS 363
+ +S+S P+P +PGPQ+
Sbjct: 1672 SSSSSSSSSPSPAKPGPQA 1690
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 29.5 bits (63), Expect = 9.4
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -3
Query: 596 PTRLTARKIR-GRPENAGPDPVRNVRRFSRGHIKYIQFLRPHYIKILTR*NEHNARTSTR 420
PT +R GRP P P + RR S + + ++ +S+
Sbjct: 2582 PTPAPKEAVREGRPPE--PTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2639
Query: 419 PGTGASASRPNPTRPGPQS 363
+ +S+S P+P +PGPQ+
Sbjct: 2640 SSSSSSSSSPSPAKPGPQA 2658
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein protein.
Length = 1275
Score = 29.5 bits (63), Expect = 9.4
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -3
Query: 596 PTRLTARKIR-GRPENAGPDPVRNVRRFSRGHIKYIQFLRPHYIKILTR*NEHNARTSTR 420
PT +R GRP P P + RR S + + ++ +S+
Sbjct: 1105 PTPAPKEAVREGRPPE--PTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 1162
Query: 419 PGTGASASRPNPTRPGPQS 363
+ +S+S P+P +PGPQ+
Sbjct: 1163 SSSSSSSSSPSPAKPGPQA 1181
>AB011131-1|BAA25485.1| 1212|Homo sapiens KIAA0559 protein protein.
Length = 1212
Score = 29.5 bits (63), Expect = 9.4
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = -3
Query: 446 EHNARTSTRPGTGASASRPNPTRPGPQSQSLFRSYGSNLPTSLTYII 306
E + + P + S+S P+P +PG S S + +GS+ PT T ++
Sbjct: 922 EKGSHVHSGPTSAGSSSVPSPGQPGSPSVSK-KKHGSSKPTDGTKVV 967
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 29.5 bits (63), Expect = 9.4
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = -3
Query: 596 PTRLTARKIR-GRPENAGPDPVRNVRRFSRGHIKYIQFLRPHYIKILTR*NEHNARTSTR 420
PT +R GRP P P + RR S + + ++ +S+
Sbjct: 2630 PTPAPKEAVREGRPPE--PTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2687
Query: 419 PGTGASASRPNPTRPGPQS 363
+ +S+S P+P +PGPQ+
Sbjct: 2688 SSSSSSSSSPSPAKPGPQA 2706
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,757,557
Number of Sequences: 237096
Number of extensions: 2206981
Number of successful extensions: 8186
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 7370
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8173
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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