Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0119
         (743 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001820-1|AAN71575.1|  372|Drosophila melanogaster RH41633p pro...    29   5.1  
AE014296-1708|AAF50224.3|  388|Drosophila melanogaster CG6767-PB...    29   5.1  

>BT001820-1|AAN71575.1|  372|Drosophila melanogaster RH41633p
           protein.
          Length = 372

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 17/75 (22%), Positives = 38/75 (50%)
 Frame = +3

Query: 15  NKMKLLVVFAMCVLAASAGVVELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYES 194
           N M+LL++   C +A+++ V  +       + QD +DKL  S    +     +K+ +++ 
Sbjct: 97  NLMELLIMINACKIASASRVTAV-IPCFPYARQDKKDKLAGSEDNAESKKLAKKNYDWKF 155

Query: 195 QGQGSIVQNVVNNLI 239
           + +  I   +V N++
Sbjct: 156 RSRAPISAKLVANML 170


>AE014296-1708|AAF50224.3|  388|Drosophila melanogaster CG6767-PB,
           isoform B protein.
          Length = 388

 Score = 29.5 bits (63), Expect = 5.1
 Identities = 17/75 (22%), Positives = 38/75 (50%)
 Frame = +3

Query: 15  NKMKLLVVFAMCVLAASAGVVELSADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYES 194
           N M+LL++   C +A+++ V  +       + QD +DKL  S    +     +K+ +++ 
Sbjct: 113 NLMELLIMINACKIASASRVTAV-IPCFPYARQDKKDKLAGSEDNAESKKLAKKNYDWKF 171

Query: 195 QGQGSIVQNVVNNLI 239
           + +  I   +V N++
Sbjct: 172 RSRAPISAKLVANML 186


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,074,608
Number of Sequences: 53049
Number of extensions: 637463
Number of successful extensions: 2418
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2407
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3375989364
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)