Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0118
(767 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012669-1|AAT08475.1| 46|Drosophila melanogaster LD48059p pro... 46 8e-05
EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire prot... 30 4.0
AE014297-2064|AAF55213.2| 636|Drosophila melanogaster CG33207-P... 29 7.0
AB081475-1|BAC06341.1| 636|Drosophila melanogaster transmembran... 29 7.0
L77907-1|AAC37264.1| 1883|Drosophila melanogaster chromodomain-h... 29 9.3
EF120981-1|ABO93159.1| 637|Drosophila melanogaster misfire prot... 29 9.3
EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot... 29 9.3
EF120978-1|ABO93156.1| 839|Drosophila melanogaster misfire prot... 29 9.3
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot... 29 9.3
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot... 29 9.3
BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p pro... 29 9.3
AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p pro... 29 9.3
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA... 29 9.3
AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA ... 29 9.3
>BT012669-1|AAT08475.1| 46|Drosophila melanogaster LD48059p
protein.
Length = 46
Score = 45.6 bits (103), Expect = 8e-05
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +1
Query: 181 EHKCWDPKDGELCLVRSKSGETLME 255
EH C DPKDGEL L+R KSGETLME
Sbjct: 9 EHICCDPKDGELYLIRLKSGETLME 33
>EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire
protein.
Length = 1349
Score = 29.9 bits (64), Expect = 4.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 651 SRNPLRSVQRLTCRSNQP*KWMALKR 728
SRNPLR +QRL + P KW+ + R
Sbjct: 479 SRNPLRKLQRLKYLTPPPLKWVPIAR 504
>AE014297-2064|AAF55213.2| 636|Drosophila melanogaster CG33207-PB,
isoform B protein.
Length = 636
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 301 YTQFRRSICTSESLRSPSGFPLTST*PGIVHHLSGP 194
Y Q + +S+ PSG+P+T + P +V GP
Sbjct: 184 YQQHHSELLQGKSIHYPSGYPMTRSPPFLVSSSPGP 219
>AB081475-1|BAC06341.1| 636|Drosophila melanogaster transmembrane
protein Pxb protein.
Length = 636
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -2
Query: 301 YTQFRRSICTSESLRSPSGFPLTST*PGIVHHLSGP 194
Y Q + +S+ PSG+P+T + P +V GP
Sbjct: 184 YQQHHSELLQGKSIHYPSGYPMTRSPPFLVSSSPGP 219
>L77907-1|AAC37264.1| 1883|Drosophila melanogaster
chromodomain-helicase-DNA-bindingprotein protein.
Length = 1883
Score = 28.7 bits (61), Expect = 9.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 214 VHHLSGPSICAQSAPSFTDWKRD 146
+HHL GP +C + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595
>EF120981-1|ABO93159.1| 637|Drosophila melanogaster misfire
protein.
Length = 637
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 651 SRNPLRSVQRLTCRSNQP*KWMALKR 728
S+NPLR +QRL + P KW+ + R
Sbjct: 477 SKNPLRKLQRLKYLTPPPLKWVPIAR 502
>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
protein.
Length = 1396
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 651 SRNPLRSVQRLTCRSNQP*KWMALKR 728
S+NPLR +QRL + P KW+ + R
Sbjct: 567 SKNPLRKLQRLKYLTPPPLKWVPIAR 592
>EF120978-1|ABO93156.1| 839|Drosophila melanogaster misfire
protein.
Length = 839
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 651 SRNPLRSVQRLTCRSNQP*KWMALKR 728
S+NPLR +QRL + P KW+ + R
Sbjct: 28 SKNPLRKLQRLKYLTPPPLKWVPIAR 53
>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
protein.
Length = 1437
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 651 SRNPLRSVQRLTCRSNQP*KWMALKR 728
S+NPLR +QRL + P KW+ + R
Sbjct: 567 SKNPLRKLQRLKYLTPPPLKWVPIAR 592
>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
protein.
Length = 1659
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 651 SRNPLRSVQRLTCRSNQP*KWMALKR 728
S+NPLR +QRL + P KW+ + R
Sbjct: 789 SKNPLRKLQRLKYLTPPPLKWVPIAR 814
>BT011071-1|AAR82736.1| 1645|Drosophila melanogaster SD21488p
protein.
Length = 1645
Score = 28.7 bits (61), Expect = 9.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 214 VHHLSGPSICAQSAPSFTDWKRD 146
+HHL GP +C + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595
>AY095050-1|AAM11378.1| 1101|Drosophila melanogaster LD39323p
protein.
Length = 1101
Score = 28.7 bits (61), Expect = 9.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 214 VHHLSGPSICAQSAPSFTDWKRD 146
+HHL GP +C + T W+R+
Sbjct: 41 IHHLYGPFLCVVPLSTMTAWQRE 63
>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
protein.
Length = 1782
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 651 SRNPLRSVQRLTCRSNQP*KWMALKR 728
S+NPLR +QRL + P KW+ + R
Sbjct: 751 SKNPLRKLQRLKYLTPPPLKWVPIAR 776
>AE014134-528|AAF51170.1| 1883|Drosophila melanogaster CG3733-PA
protein.
Length = 1883
Score = 28.7 bits (61), Expect = 9.3
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -2
Query: 214 VHHLSGPSICAQSAPSFTDWKRD 146
+HHL GP +C + T W+R+
Sbjct: 573 IHHLYGPFLCVVPLSTMTAWQRE 595
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,982,585
Number of Sequences: 53049
Number of extensions: 804467
Number of successful extensions: 1870
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1870
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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