Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0117
         (645 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    24   3.6  
AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    24   4.7  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   4.7  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            23   6.3  
AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.    23   6.3  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.3  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +3

Query: 576 SCTRPSGRWCELPSAGLCL 632
           SC RP G  C  P  G C+
Sbjct: 594 SCDRPGGLLCSGPDHGRCV 612


>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 17  ISAGARCFVPSVQSGDVAET 76
           ISAG  CFV   Q G++A+T
Sbjct: 360 ISAGKFCFVDIEQFGNMAKT 379


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = -3

Query: 130  PPGSVLEP-DHAGVLNGD 80
            PPGS+L+P D A V+ G+
Sbjct: 1092 PPGSILDPSDGAAVVGGN 1109


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 427 RQALDCSPIKRERELGLDRR-ETG*FYPMMACLCDSNTAQ 543
           R+ +    I+  + +G DR  + G  YP  +C C+SN  Q
Sbjct: 208 REQVSLYNIQGTKYVGDDRVFDNGVKYPEASCWCNSNPTQ 247


>AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.
          Length = 56

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
 Frame = +3

Query: 105 SGSRTLP----GGEFDWGGTSVKE 164
           +G+RT+P    GG F  GGT +K+
Sbjct: 21  TGARTVPRVFIGGNFVGGGTDIKK 44


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 6.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -3

Query: 151 VPPQSNSPPGSVLEPD 104
           +PP SNS P S   PD
Sbjct: 868 MPPSSNSSPSSYPSPD 883


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 703,787
Number of Sequences: 2352
Number of extensions: 14336
Number of successful extensions: 23
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)