Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0117
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061151-1|AAL28699.1|  948|Drosophila melanogaster LD12377p pro...    31   1.8  
AE014297-3194|AAX52971.1|  993|Drosophila melanogaster CG31156-P...    31   1.8  
AE014297-3193|AAF56028.3|  948|Drosophila melanogaster CG31156-P...    31   1.8  
BT016087-1|AAV36972.1|  749|Drosophila melanogaster LD41296p pro...    29   5.4  
AY051669-1|AAK93093.1|  457|Drosophila melanogaster LD22190p pro...    29   5.4  
AJ002520-1|CAC20093.1|  749|Drosophila melanogaster DALAO protei...    29   5.4  
AF348329-1|AAK31343.1|  749|Drosophila melanogaster Brahma-assoc...    29   5.4  
AE014298-1284|AAF46450.1|  749|Drosophila melanogaster CG7055-PA...    29   5.4  

>AY061151-1|AAL28699.1|  948|Drosophila melanogaster LD12377p
           protein.
          Length = 948

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +1

Query: 397 SALPIIAKQIRQALDCSPIKRERELGLD 480
           +A+ + AK ++Q L  SP+K ER LG+D
Sbjct: 505 AAIDVFAKNLKQLLLISPLKGERILGID 532


>AE014297-3194|AAX52971.1|  993|Drosophila melanogaster CG31156-PB,
           isoform B protein.
          Length = 993

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +1

Query: 397 SALPIIAKQIRQALDCSPIKRERELGLD 480
           +A+ + AK ++Q L  SP+K ER LG+D
Sbjct: 505 AAIDVFAKNLKQLLLISPLKGERILGID 532


>AE014297-3193|AAF56028.3|  948|Drosophila melanogaster CG31156-PA,
           isoform A protein.
          Length = 948

 Score = 30.7 bits (66), Expect = 1.8
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +1

Query: 397 SALPIIAKQIRQALDCSPIKRERELGLD 480
           +A+ + AK ++Q L  SP+K ER LG+D
Sbjct: 505 AAIDVFAKNLKQLLLISPLKGERILGID 532


>BT016087-1|AAV36972.1|  749|Drosophila melanogaster LD41296p
           protein.
          Length = 749

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -3

Query: 280 RPCFRSPYATEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 101
           RP ++  Y      Q  + PF+P + S        ++  S    PPQ N  PG    P+H
Sbjct: 594 RPYYQPQYGGHPTPQPYYAPFSPYQQSYGPPPGSHYM--SPRPPPPQHNGNPGHPYAPEH 651


>AY051669-1|AAK93093.1|  457|Drosophila melanogaster LD22190p
           protein.
          Length = 457

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -3

Query: 280 RPCFRSPYATEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 101
           RP ++  Y      Q  + PF+P + S        ++  S    PPQ N  PG    P+H
Sbjct: 302 RPYYQPQYGGHPTPQPYYAPFSPYQQSYGPPPGSHYM--SPRPPPPQHNGNPGHPYAPEH 359


>AJ002520-1|CAC20093.1|  749|Drosophila melanogaster DALAO protein
           protein.
          Length = 749

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -3

Query: 280 RPCFRSPYATEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 101
           RP ++  Y      Q  + PF+P + S        ++  S    PPQ N  PG    P+H
Sbjct: 594 RPYYQPQYGGHPTPQPYYAPFSPYQQSYGPPPGSHYM--SPRPPPPQHNGNPGHPYAPEH 651


>AF348329-1|AAK31343.1|  749|Drosophila melanogaster
           Brahma-associated protein 111kD protein.
          Length = 749

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -3

Query: 280 RPCFRSPYATEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 101
           RP ++  Y      Q  + PF+P + S        ++  S    PPQ N  PG    P+H
Sbjct: 594 RPYYQPQYGGHPTPQPYYAPFSPYQQSYGPPPGSHYM--SPRPPPPQHNGNPGHPYAPEH 651


>AE014298-1284|AAF46450.1|  749|Drosophila melanogaster CG7055-PA
           protein.
          Length = 749

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -3

Query: 280 RPCFRSPYATEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 101
           RP ++  Y      Q  + PF+P + S        ++  S    PPQ N  PG    P+H
Sbjct: 594 RPYYQPQYGGHPTPQPYYAPFSPYQQSYGPPPGSHYM--SPRPPPPQHNGNPGHPYAPEH 651


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,611,696
Number of Sequences: 53049
Number of extensions: 667149
Number of successful extensions: 2016
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2016
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)