Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0116
         (739 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    74   6e-13
BC049203-1|AAH49203.1|  657|Homo sapiens solute carrier family 4...    32   1.9  
AL590368-3|CAH73436.1|  654|Homo sapiens solute carrier family 4...    32   1.9  
AL590368-2|CAH73435.1|  652|Homo sapiens solute carrier family 4...    32   1.9  
AL590368-1|CAH73434.1|  657|Homo sapiens solute carrier family 4...    32   1.9  
AL450265-3|CAI14397.1|  654|Homo sapiens solute carrier family 4...    32   1.9  
AL450265-2|CAI14396.1|  652|Homo sapiens solute carrier family 4...    32   1.9  
AL450265-1|CAI14395.1|  657|Homo sapiens solute carrier family 4...    32   1.9  
AL161627-3|CAI13071.1|  654|Homo sapiens solute carrier family 4...    32   1.9  
AL161627-2|CAI13070.1|  652|Homo sapiens solute carrier family 4...    32   1.9  
AL161627-1|CAI13069.1|  657|Homo sapiens solute carrier family 4...    32   1.9  
AJ420812-1|CAD12764.1|  657|Homo sapiens choline transporter-lik...    32   1.9  
AJ272365-1|CAC82175.1|  652|Homo sapiens CD92 protein protein.         32   1.9  
AJ245620-1|CAB75541.2|  654|Homo sapiens choline transporter-lik...    32   1.9  
BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.      30   7.5  
AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type ...    30   7.5  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 73.7 bits (173), Expect = 6e-13
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -3

Query: 413 MIGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC*K 303
           MIGRADIEGSKS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>BC049203-1|AAH49203.1|  657|Homo sapiens solute carrier family 44,
           member 1 protein.
          Length = 657

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>AL590368-3|CAH73436.1|  654|Homo sapiens solute carrier family 44,
           member 1 protein.
          Length = 654

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>AL590368-2|CAH73435.1|  652|Homo sapiens solute carrier family 44,
           member 1 protein.
          Length = 652

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>AL590368-1|CAH73434.1|  657|Homo sapiens solute carrier family 44,
           member 1 protein.
          Length = 657

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>AL450265-3|CAI14397.1|  654|Homo sapiens solute carrier family 44,
           member 1 protein.
          Length = 654

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>AL450265-2|CAI14396.1|  652|Homo sapiens solute carrier family 44,
           member 1 protein.
          Length = 652

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>AL450265-1|CAI14395.1|  657|Homo sapiens solute carrier family 44,
           member 1 protein.
          Length = 657

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>AL161627-3|CAI13071.1|  654|Homo sapiens solute carrier family 44,
           member 1 protein.
          Length = 654

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>AL161627-2|CAI13070.1|  652|Homo sapiens solute carrier family 44,
           member 1 protein.
          Length = 652

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>AL161627-1|CAI13069.1|  657|Homo sapiens solute carrier family 44,
           member 1 protein.
          Length = 657

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>AJ420812-1|CAD12764.1|  657|Homo sapiens choline transporter-like
           protein 1, splice variant a protein.
          Length = 657

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>AJ272365-1|CAC82175.1|  652|Homo sapiens CD92 protein protein.
          Length = 652

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>AJ245620-1|CAB75541.2|  654|Homo sapiens choline transporter-like
           protein protein.
          Length = 654

 Score = 32.3 bits (70), Expect = 1.9
 Identities = 17/53 (32%), Positives = 32/53 (60%)
 Frame = +1

Query: 481 VVRQVSFTLRWLVVAIVILLSTRGTAVSDIWFMHSAERPVVRTTIRGIMPERL 639
           ++R +S  L W++  +VIL S  GT V  +W++++ +R   R+    + PE+L
Sbjct: 232 IIRYISRVLVWILTILVILGSLGGTGV--LWWLYAKQR---RSPKETVTPEQL 279


>BC048251-1|AAH48251.1|  322|Homo sapiens ZDHHC12 protein protein.
          Length = 322

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 633 TPLRPKPA*PNPARICSLWSPESRE 707
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


>AL441992-6|CAI15406.1|  210|Homo sapiens zinc finger, DHHC-type
           containing 12 protein.
          Length = 210

 Score = 30.3 bits (65), Expect = 7.5
 Identities = 13/25 (52%), Positives = 15/25 (60%)
 Frame = +3

Query: 633 TPLRPKPA*PNPARICSLWSPESRE 707
           TP  P P  P PA +CS  SPE R+
Sbjct: 68  TPTPPTPVLPGPASLCSPASPELRQ 92


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,701,117
Number of Sequences: 237096
Number of extensions: 2703109
Number of successful extensions: 5994
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 5619
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5985
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8791154398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)