Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0116
         (739 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024212-1|ABC86274.1| 1085|Drosophila melanogaster RE28791p pro...    29   6.6  
BT016087-1|AAV36972.1|  749|Drosophila melanogaster LD41296p pro...    29   6.6  
AY051669-1|AAK93093.1|  457|Drosophila melanogaster LD22190p pro...    29   6.6  
AJ002520-1|CAC20093.1|  749|Drosophila melanogaster DALAO protei...    29   6.6  
AF348329-1|AAK31343.1|  749|Drosophila melanogaster Brahma-assoc...    29   6.6  
AE014298-1284|AAF46450.1|  749|Drosophila melanogaster CG7055-PA...    29   6.6  
AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-P...    29   6.6  
AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA ...    29   6.6  
AE014297-2848|AAF55800.1|  300|Drosophila melanogaster CG17267-P...    29   8.7  

>BT024212-1|ABC86274.1| 1085|Drosophila melanogaster RE28791p
           protein.
          Length = 1085

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -2

Query: 525 RNDKPS*GKTNLSHDGLIPAHVPF*WVNNPTLGEFVRNDRKSRHRRIKKQRRYER 361
           R+++ + G+  + H    P H+      NP   E V + RKS  R   K+RR++R
Sbjct: 398 RHNRSATGRAEVEHHKSQPRHI------NPFKRESVLSGRKSSSRPSSKERRFQR 446


>BT016087-1|AAV36972.1|  749|Drosophila melanogaster LD41296p
           protein.
          Length = 749

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -1

Query: 280 RPCFRSPYATEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 101
           RP ++  Y      Q  + PF+P + S        ++  S    PPQ N  PG    P+H
Sbjct: 594 RPYYQPQYGGHPTPQPYYAPFSPYQQSYGPPPGSHYM--SPRPPPPQHNGNPGHPYAPEH 651


>AY051669-1|AAK93093.1|  457|Drosophila melanogaster LD22190p
           protein.
          Length = 457

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -1

Query: 280 RPCFRSPYATEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 101
           RP ++  Y      Q  + PF+P + S        ++  S    PPQ N  PG    P+H
Sbjct: 302 RPYYQPQYGGHPTPQPYYAPFSPYQQSYGPPPGSHYM--SPRPPPPQHNGNPGHPYAPEH 359


>AJ002520-1|CAC20093.1|  749|Drosophila melanogaster DALAO protein
           protein.
          Length = 749

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -1

Query: 280 RPCFRSPYATEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 101
           RP ++  Y      Q  + PF+P + S        ++  S    PPQ N  PG    P+H
Sbjct: 594 RPYYQPQYGGHPTPQPYYAPFSPYQQSYGPPPGSHYM--SPRPPPPQHNGNPGHPYAPEH 651


>AF348329-1|AAK31343.1|  749|Drosophila melanogaster
           Brahma-associated protein 111kD protein.
          Length = 749

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -1

Query: 280 RPCFRSPYATEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 101
           RP ++  Y      Q  + PF+P + S        ++  S    PPQ N  PG    P+H
Sbjct: 594 RPYYQPQYGGHPTPQPYYAPFSPYQQSYGPPPGSHYM--SPRPPPPQHNGNPGHPYAPEH 651


>AE014298-1284|AAF46450.1|  749|Drosophila melanogaster CG7055-PA
           protein.
          Length = 749

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 17/60 (28%), Positives = 25/60 (41%)
 Frame = -1

Query: 280 RPCFRSPYATEHLDQASFCPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDH 101
           RP ++  Y      Q  + PF+P + S        ++  S    PPQ N  PG    P+H
Sbjct: 594 RPYYQPQYGGHPTPQPYYAPFSPYQQSYGPPPGSHYM--SPRPPPPQHNGNPGHPYAPEH 651


>AE014296-2411|AAF49717.2| 1333|Drosophila melanogaster CG17177-PA
           protein.
          Length = 1333

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 593 RSAECMNQMSETAVPLVLSSITIATTSH 510
           +  EC  Q+S  ++ LV+S+IT+AT +H
Sbjct: 701 QQCECHAQVSIASLLLVISAITVATNTH 728


>AE014296-973|AAF50767.2| 1929|Drosophila melanogaster CG5146-PA
           protein.
          Length = 1929

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 17/55 (30%), Positives = 28/55 (50%)
 Frame = -2

Query: 525 RNDKPS*GKTNLSHDGLIPAHVPF*WVNNPTLGEFVRNDRKSRHRRIKKQRRYER 361
           R+++ + G+  + H    P H+      NP   E V + RKS  R   K+RR++R
Sbjct: 766 RHNRSATGRAEVEHHKSQPRHI------NPFKRESVLSGRKSSSRPSSKERRFQR 814


>AE014297-2848|AAF55800.1|  300|Drosophila melanogaster CG17267-PA
           protein.
          Length = 300

 Score = 28.7 bits (61), Expect = 8.7
 Identities = 15/42 (35%), Positives = 22/42 (52%)
 Frame = -2

Query: 513 PS*GKTNLSHDGLIPAHVPF*WVNNPTLGEFVRNDRKSRHRR 388
           PS   T+   DG + AH P       TLG ++R+D  +R R+
Sbjct: 228 PSDAPTSDDDDGDVEAHSPLSESMRNTLGTYMRDDSHTRQRQ 269


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,377,238
Number of Sequences: 53049
Number of extensions: 798602
Number of successful extensions: 2312
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2311
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3334818762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)