Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0113
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 27 9.1
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 9.1
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF040661-11|AAG24210.1| 211|Caenorhabditis elegans Hypothetical... 27 9.1
AF040661-10|AAG24215.1| 426|Caenorhabditis elegans Hypothetical... 27 9.1
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/96 (20%), Positives = 39/96 (40%)
Frame = +2
Query: 32 ELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSIS 211
++Y DL+ ++ S++ N R++ + R + PD G + ++
Sbjct: 1147 QVYQDLKRVKFDRERLNGSLE-EQLNKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLN 1205
Query: 212 LPDSARLASALEAFSIIPRMVASHHRPLGRVHEPNV 319
D LA+ E + + H R L + HE N+
Sbjct: 1206 ESDQQTLATLTEQIKVTQAEIELHRRDL-KKHESNL 1240
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 27.5 bits (58), Expect = 9.1
Identities = 20/96 (20%), Positives = 39/96 (40%)
Frame = +2
Query: 32 ELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSIS 211
++Y DL+ ++ S++ N R++ + R + PD G + ++
Sbjct: 1147 QVYQDLKRVKFDRERLNGSLE-EQLNKARKQKKNLAAKKRQMVKTQTAAPDYDGRNIDLN 1205
Query: 212 LPDSARLASALEAFSIIPRMVASHHRPLGRVHEPNV 319
D LA+ E + + H R L + HE N+
Sbjct: 1206 ESDQQTLATLTEQIKVTQAEIELHRRDL-KKHESNL 1240
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 559 VTTGITGL----WQPSVHSDVLFDPSMSALPIIAKQNSPSV 449
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 559 VTTGITGL----WQPSVHSDVLFDPSMSALPIIAKQNSPSV 449
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 559 VTTGITGL----WQPSVHSDVLFDPSMSALPIIAKQNSPSV 449
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 1098 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1138
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 559 VTTGITGL----WQPSVHSDVLFDPSMSALPIIAKQNSPSV 449
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 1076 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1116
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 559 VTTGITGL----WQPSVHSDVLFDPSMSALPIIAKQNSPSV 449
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2255 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 27.5 bits (58), Expect = 9.1
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Frame = -1
Query: 559 VTTGITGL----WQPSVHSDVLFDPSMSALPIIAKQNSPSV 449
VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2277 VTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>Z70037-4|CAA93877.1| 146|Caenorhabditis elegans Hypothetical
protein T27D12.3 protein.
Length = 146
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 300 RPSGRWCEATIRGIMLNASKAEAS 229
RPSG WC G+ L ++ EAS
Sbjct: 35 RPSGPWCVKLFVGLYLQGNRNEAS 58
>AF040661-11|AAG24210.1| 211|Caenorhabditis elegans Hypothetical
protein W10G11.15 protein.
Length = 211
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = -2
Query: 300 RPSGRWCEATIRGIMLNASKAEASLAESGKDMLTVEPRESGGSKQCDFTSRVSHS 136
RPSG WC G + AE S G + ++ R Q ++++ S
Sbjct: 49 RPSGGWCMRVFEGFNAAKTDAEKSCKSVGSTLSGIQNRNEALYIQTALLAQIARS 103
>AF040661-10|AAG24215.1| 426|Caenorhabditis elegans Hypothetical
protein W10G11.6 protein.
Length = 426
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/39 (43%), Positives = 21/39 (53%)
Frame = -2
Query: 339 REEPQFRTFGSCTRPSGRWCEATIRGIMLNASKAEASLA 223
R EP +R F RPSG WC G +A+KA+A A
Sbjct: 255 RCEPGWRFFN---RPSGGWCIRVFTG--FHAAKADAEAA 288
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,358,498
Number of Sequences: 27780
Number of extensions: 308011
Number of successful extensions: 871
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 871
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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