Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0111
         (655 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A7EAJ1 Cluster: Putative uncharacterized protein; n=1; ...    37   0.49 
UniRef50_Q9MTD7 Cluster: Clp; n=8; Apicomplexa|Rep: Clp - Toxopl...    35   1.5  
UniRef50_Q8MUM7 Cluster: Hedgehog-like protein; n=3; Protostomia...    34   2.6  
UniRef50_A0ECC4 Cluster: Chromosome undetermined scaffold_89, wh...    34   2.6  
UniRef50_A5K1G0 Cluster: Putative uncharacterized protein; n=4; ...    33   6.0  

>UniRef50_A7EAJ1 Cluster: Putative uncharacterized protein; n=1;
            Sclerotinia sclerotiorum 1980|Rep: Putative
            uncharacterized protein - Sclerotinia sclerotiorum 1980
          Length = 1519

 Score = 36.7 bits (81), Expect = 0.49
 Identities = 14/45 (31%), Positives = 27/45 (60%)
 Frame = -1

Query: 637  CIMSQLRYTQIHSNQDISSSLGYITQYISITLAILVDRFRNIVIY 503
            C++ +L YT ++S  DI+ SLG + QY+       +++ R ++ Y
Sbjct: 1297 CMIGELMYTMVYSRPDIAFSLGKLNQYMKDPAEFYMNQLRRVMRY 1341


>UniRef50_Q9MTD7 Cluster: Clp; n=8; Apicomplexa|Rep: Clp -
           Toxoplasma gondii
          Length = 765

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 4/75 (5%)
 Frame = +2

Query: 131 QLYLLSNIILTNCNKLYKLSKTVYQLIN*LNYKFISDWKGEVSFIL--KFL*KYFNIY-- 298
           QLY+ +N   T  N     S T+++  N LN  FI+ WK  ++ +     L KY  IY  
Sbjct: 67  QLYIKNNFKQTQLNYNILFSYTLFKFFNNLNKSFINTWKLTINLLQYNSILFKYILIYLF 126

Query: 299 DQKHS*YDKISLVVY 343
             K + Y+ I+ +++
Sbjct: 127 KVKSNTYNLINSIIF 141


>UniRef50_Q8MUM7 Cluster: Hedgehog-like protein; n=3; Protostomia|Rep:
            Hedgehog-like protein - Helobdella robusta (Leech)
          Length = 1073

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 24/70 (34%), Positives = 33/70 (47%)
 Frame = +2

Query: 380  RINFVSLLK*NTNNNYSEIKSFSYFPYT*KSLFYNKKINRKVNNDISKSVHQYRQCNRNV 559
            +IN  SLLK N NNNY   K+  +      +   N   N   NN+ISK +      +   
Sbjct: 833  KINCSSLLKLNNNNNY-YYKNNIHNNNNNNNSNNNNNNNNNSNNNISKFLVNVYSAHSGC 891

Query: 560  LCDVS*TARN 589
             CD++ TA N
Sbjct: 892  ACDLNYTATN 901


>UniRef50_A0ECC4 Cluster: Chromosome undetermined scaffold_89, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_89,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 511

 Score = 34.3 bits (75), Expect = 2.6
 Identities = 21/72 (29%), Positives = 32/72 (44%)
 Frame = +2

Query: 347 VAN*FSIVKV*RINFVSLLK*NTNNNYSEIKSFSYFPYT*KSLFYNKKINRKVNNDISKS 526
           V N F I++   +N  +LL  N NN     K +    Y  K   +  K  RK   D+   
Sbjct: 428 VGNQFLILQQKMLNIENLLNGNQNNKSKICKIYEQIQYNKKERPFKVKQLRKATLDLKDD 487

Query: 527 VHQYRQCNRNVL 562
            HQ +Q  +N++
Sbjct: 488 QHQLKQKIKNII 499


>UniRef50_A5K1G0 Cluster: Putative uncharacterized protein; n=4;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1456

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
 Frame = -2

Query: 195 VFDSLYNLLQFVNIILLRRYNC*------DILADCCVTTIYYFIIHTVY*VYSIKCYVVF 34
           +F  LYN L+      L+  +C         +A   ++TIY +  +T   +Y +K +V +
Sbjct: 552 LFHILYNKLKIKKEFFLKNCSCCKFSNGGSFMAVSKISTIYIYKTYTYELLYVLKSHVNY 611

Query: 33  IIPYAW*CKDF 1
           I    W C DF
Sbjct: 612 ITDLVWSCNDF 622


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 502,655,703
Number of Sequences: 1657284
Number of extensions: 8646431
Number of successful extensions: 19062
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19043
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)