Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0111
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    24   1.3  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   1.7  
AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    22   5.1  

>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 440 FLFLNNYYWCFILTKKRS*FFRLLQLK 360
           F+F+N ++W  IL    + F R++ LK
Sbjct: 99  FIFVNVFFWVIILMSNYA-FTRIILLK 124


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 237 LMNL*FN*LINWYTVFDSLYNLLQF 163
           ++NL  N LI+WYTV     N  QF
Sbjct: 8   IVNLGLNGLIDWYTVCLVPLNPYQF 32



 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 209 LIGTQFLTVYIIYCNLLILYC 147
           L+G  ++T+YII  N    YC
Sbjct: 228 LLGDLYVTLYIILTNNQAKYC 248


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 191 LTVYIIYCNLLILYC 147
           L +Y  YC L+IL C
Sbjct: 283 LCIYYFYCALIILLC 297



 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 13  LPCIWYYKNYIAFYRINLV 69
           LPCI+Y+ +    + I+L+
Sbjct: 209 LPCIYYFYSAFIIFTIHLL 227


>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like protein
           protein.
          Length = 160

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = +2

Query: 173 KLYKLSKTVYQLIN*LNYKFISDWKGEVSFILKFL*KY 286
           KL K+   V  L++ +  +F     G+VS +LKF+ KY
Sbjct: 54  KLSKIPNNV-NLMDVVAREFDKIQVGDVSSVLKFIRKY 90


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,422
Number of Sequences: 336
Number of extensions: 2734
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)