Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0111
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   4.8  
DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.    23   6.4  
AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.    23   6.4  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   8.4  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -3

Query: 623 ITLHPDSFKSRHF*QSRIHHTVHFYYIGDTGGQ 525
           I LH  + + +   Q ++HH  H ++    GG+
Sbjct: 142 IVLHHQAHQQQQQQQQQLHHHHHHHHNAPAGGE 174


>DQ004402-1|AAY21241.1|  144|Anopheles gambiae lysozyme c-8 protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -3

Query: 431 LNNYYWC 411
           +NNYYWC
Sbjct: 74  INNYYWC 80


>AY659930-1|AAT51798.2|  144|Anopheles gambiae lysozyme c-3 protein.
          Length = 144

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = -3

Query: 431 LNNYYWC 411
           +NNYYWC
Sbjct: 74  INNYYWC 80


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -3

Query: 356 NSLQSTLQAKFYHIMNVSDHK 294
           +SL++ L+    H+++ SDHK
Sbjct: 207 SSLETQLRTTDMHVLSFSDHK 227


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 557,914
Number of Sequences: 2352
Number of extensions: 10415
Number of successful extensions: 92
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)