Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0111
         (655 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    24   1.5  
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    24   1.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   7.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   7.9  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   7.9  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   7.9  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 164 NCNKLYKLSKTVYQ 205
           NCNK+Y L+K V +
Sbjct: 122 NCNKIYNLAKCVQE 135


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 164 NCNKLYKLSKTVYQ 205
           NCNK+Y L+K V +
Sbjct: 122 NCNKIYNLAKCVQE 135


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 140 LLSNIILTNCNKLYKLSKTVYQLIN 214
           L+SN IL  CN L++  +  Y   N
Sbjct: 46  LISNDILPVCNGLWRWIRLTYGQTN 70


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 140 LLSNIILTNCNKLYKLSKTVYQLIN 214
           L+SN IL  CN L++  +  Y   N
Sbjct: 84  LISNDILPVCNGLWRWIRLTYGQTN 108


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 533 QYRQCNRNVLCDVS*TARN 589
           QYR C +N  C +    RN
Sbjct: 51  QYRPCTKNQQCSILRINRN 69


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +2

Query: 533 QYRQCNRNVLCDVS*TARN 589
           QYR C +N  C +    RN
Sbjct: 100 QYRPCTKNQQCSILRINRN 118


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,396
Number of Sequences: 438
Number of extensions: 3079
Number of successful extensions: 18
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)