Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0108
(670 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1462 + 27308792-27308924,27309711-27309778,27309854-273101... 95 6e-20
04_03_0562 + 17190443-17190520,17190715-17190853,17190943-171910... 52 3e-07
11_01_0689 - 5678227-5678343,5678475-5678636,5678751-5678846,567... 49 3e-06
10_08_0101 - 14789994-14790205,14790290-14790957,14791232-147913... 49 4e-06
11_01_0688 - 5667539-5667655,5667792-5667953,5668084-5668179,566... 48 5e-06
10_02_0173 + 6191676-6191764,6192147-6192260,6192411-6192638,619... 48 5e-06
04_02_0018 - 8595479-8595678,8595782-8595935,8596396-8597032,859... 47 1e-05
11_06_0432 + 23448482-23448570,23448987-23449100,23449514-234495... 47 2e-05
11_01_0686 - 5635207-5635323,5635483-5635644,5635727-5635822,563... 47 2e-05
03_01_0636 - 4664472-4664588,4664695-4664856,4664984-4665061,466... 46 4e-05
04_04_1128 + 31103582-31103709,31105231-31105344,31105906-311064... 45 6e-05
02_05_0070 - 25584690-25584806,25585151-25585312,25585396-255854... 45 6e-05
10_01_0344 - 3777610-3777758,3777870-3777959,3778950-3779025,377... 44 8e-05
04_03_0559 + 17118319-17118396,17119329-17119467,17119569-171196... 44 8e-05
04_03_0566 + 17209455-17209565,17210159-17210203,17211456-172115... 44 1e-04
09_04_0028 - 13928542-13929538,13929736-13929818 43 2e-04
03_02_0208 + 6420576-6420658,6421640-6421753,6421848-6422379,642... 43 2e-04
09_04_0031 + 13946692-13946774,13947007-13948012 42 4e-04
08_02_0503 - 17848739-17849004,17849109-17849268,17849368-178496... 42 4e-04
01_06_0737 + 31592562-31592786,31593314-31593541,31593981-315940... 42 4e-04
08_01_1024 - 10349061-10349200,10349373-10350040,10350478-103505... 42 6e-04
03_01_0012 - 101584-101898,102274-102531,102932-103474 41 8e-04
09_04_0030 + 13940168-13940250,13940703-13941714 40 0.001
09_04_0029 - 13932414-13933416,13933821-13933903 40 0.001
09_04_0636 + 19150966-19151037,19151150-19151291,19151404-191514... 40 0.002
02_01_0656 - 4870315-4870975,4872018-4872245,4872874-4872987,487... 40 0.002
04_03_0629 + 18179065-18179148,18180146-18180287,18180987-181810... 40 0.002
09_04_0641 + 19172370-19172459,19172539-19172680,19172951-191730... 39 0.003
02_05_1209 + 34948899-34948938,34949086-34949222,34949854-349499... 38 0.005
08_01_0065 + 452383-452629,452733-452868,453049-453118,453237-45... 38 0.007
06_03_1023 - 26952195-26952635,26952723-26952934,26953038-269537... 33 0.27
03_01_0635 - 4660692-4660737,4660783-4660829,4661371-4661507,466... 31 0.63
09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351 29 2.5
03_06_0399 - 33632811-33633107,33633236-33633385,33633705-336340... 29 4.4
03_05_0059 - 20359480-20359552,20359690-20359777,20360255-203603... 29 4.4
12_01_0379 - 2949962-2950540 28 7.7
01_07_0370 - 43119049-43120278,43121376-43121420,43121421-431216... 28 7.7
>08_02_1462 +
27308792-27308924,27309711-27309778,27309854-27310159,
27310168-27310839
Length = 392
Score = 94.7 bits (225), Expect = 6e-20
Identities = 41/85 (48%), Positives = 61/85 (71%)
Frame = +3
Query: 3 ALLYKPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHE 182
A L N L+++ +P + +V +RM VGICGSDVHY ++ + HFV++EPM++GHE
Sbjct: 26 AWLVAKNTLKIMPFKLPPVGPYDVRVRMKAVGICGSDVHYLREMRIAHFVVKEPMVIGHE 85
Query: 183 ASGVVAKIGSKVKNLTVGDRVAIEP 257
+GV+ ++GS V +L VGDRVA+EP
Sbjct: 86 CAGVIEEVGSGVTHLAVGDRVALEP 110
Score = 90.6 bits (215), Expect = 1e-18
Identities = 47/110 (42%), Positives = 60/110 (54%), Gaps = 23/110 (20%)
Frame = +2
Query: 257 GVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYK---------------------- 370
G+ C C CK GRY+LC DM F ATPPVHG+L
Sbjct: 111 GISCWRCRHCKGGRYNLCEDMKFFATPPVHGSLANQASKQFSSISISLQEEDAILINVVI 170
Query: 371 -HAADFCFKLPDHVTMEEGALLEPLAVGIHACKRGGVSAGHVVLVLGRDP 517
H D CFKLP++V++EEGA+ EPL+VG+HAC+R V VL++G P
Sbjct: 171 VHPGDLCFKLPENVSLEEGAMCEPLSVGVHACRRADVGPETGVLIMGAGP 220
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/28 (57%), Positives = 23/28 (82%)
Frame = +1
Query: 541 AKAFGAHKVLIIDILQSRLDFAKSLGAD 624
A+AFGA +V+I+D+ + RL A+SLGAD
Sbjct: 229 ARAFGATRVVIVDVDEHRLSVARSLGAD 256
>04_03_0562 +
17190443-17190520,17190715-17190853,17190943-17191034,
17191681-17191989,17192817-17193506
Length = 435
Score = 52.4 bits (120), Expect = 3e-07
Identities = 26/73 (35%), Positives = 43/73 (58%)
Frame = +3
Query: 27 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 206
L+ V+ P+P + +DEVL++++ I SD+ QKG F + P I + SG + ++
Sbjct: 25 LKFVEIPVPSVKKDEVLVKVEAASINQSDL-MTQKGMMRPFHPKFPFIPVNNVSGEIVEV 83
Query: 207 GSKVKNLTVGDRV 245
GS V+ VGD+V
Sbjct: 84 GSAVREFKVGDKV 96
>11_01_0689 -
5678227-5678343,5678475-5678636,5678751-5678846,
5679345-5679406,5679648-5679723,5679847-5679929,
5680525-5680853,5681402-5681448,5681707-5681843,
5682093-5682126
Length = 380
Score = 49.2 bits (112), Expect = 3e-06
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 15 KPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 191
KP + V+ P+ E V L++ +C +DV++W+ KGQ F P I GHEA G
Sbjct: 20 KPLSIEEVEVAPPQAME--VRLKILYTALCHTDVYFWEAKGQTPVF----PRIFGHEAGG 73
Query: 192 VVAKIGSKVKNLTVGDRV 245
+V +G V L+ GD V
Sbjct: 74 IVESVGEGVTELSPGDHV 91
>10_08_0101 -
14789994-14790205,14790290-14790957,14791232-14791345,
14794826-14794932
Length = 366
Score = 48.8 bits (111), Expect = 4e-06
Identities = 26/74 (35%), Positives = 41/74 (55%)
Frame = +3
Query: 63 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 242
+D+V +++ GIC SD+H K + H + P++ GHE +GVV ++G V GDR
Sbjct: 40 DDDVAIKILFCGICHSDLHCI-KNEWKHSIY--PLVPGHEIAGVVTEVGKNVTRFKAGDR 96
Query: 243 VAIEPACRVGTASS 284
V + C V + S
Sbjct: 97 VGV--GCMVNSCRS 108
Score = 27.9 bits (59), Expect = 7.7
Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Frame = +2
Query: 242 SGHRAGV-----PCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAA------DFC 388
+G R GV CR CE C G + CP+ +F V Y +++ F
Sbjct: 93 AGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKDGTVTYGGYSSMVVVHERFV 152
Query: 389 FKLPDHVTMEEGALLEPLAVGIHA-CKRGGVSA-GHVVLVLG 508
P+ + ++ GA L + ++ K G++A G V VLG
Sbjct: 153 VMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVLG 194
>11_01_0688 -
5667539-5667655,5667792-5667953,5668084-5668179,
5668278-5668339,5668434-5668509,5668612-5668694,
5668807-5669132,5669741-5669787,5669900-5670036,
5670135-5670168
Length = 379
Score = 48.4 bits (110), Expect = 5e-06
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 15 KPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 191
KP + V+ P+ E V +++ +C +DV++W+ KGQ F P I+GHEA G
Sbjct: 20 KPLSIEEVEVAPPQAME--VRVKILYTALCHTDVYFWEAKGQTPVF----PRILGHEAGG 73
Query: 192 VVAKIGSKVKNLTVGDRV 245
+V +G V L GD V
Sbjct: 74 IVESVGEGVTELAPGDHV 91
>10_02_0173 +
6191676-6191764,6192147-6192260,6192411-6192638,
6192898-6193183,6193350-6193500,6193615-6193811
Length = 354
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +3
Query: 57 ISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVG 236
+ D+V LR+ G+C +DV W + + + P++ GHE +GVV ++G+ VK+ VG
Sbjct: 32 VQSDDVSLRITHCGVCYADVA-WTRNILNNSMY--PLVPGHEIAGVVTEVGADVKSFKVG 88
Query: 237 DRVAI 251
D V +
Sbjct: 89 DHVGV 93
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Frame = +2
Query: 266 CRYCEFCKTGRYHLCPDMIFCATP-PVHGNLVR--YYKHAA---DFCFKLPDHVTMEEGA 427
CR CE C + + C +F G + + Y H +CFK+PD +E+ A
Sbjct: 100 CRDCENCNSSLENYCSQHVFTFNGVDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLEKAA 159
Query: 428 LLEPLAVGI 454
L L GI
Sbjct: 160 PL--LCAGI 166
>04_02_0018 -
8595479-8595678,8595782-8595935,8596396-8597032,
8597126-8597217
Length = 360
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +3
Query: 66 DEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 245
D+V +++ G+C +D+H+ G + P++ GHE +GVV K+G+ V VGDRV
Sbjct: 36 DDVTIKVKYCGMCHTDLHFIHN-DWG--ITMYPVVPGHEITGVVTKVGTNVAGFKVGDRV 92
Query: 246 AI 251
+
Sbjct: 93 GV 94
>11_06_0432 +
23448482-23448570,23448987-23449100,23449514-23449580,
23449614-23449741,23452786-23453071,23453264-23453414,
23453603-23453799
Length = 343
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/62 (35%), Positives = 36/62 (58%)
Frame = +3
Query: 54 EISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTV 233
E+ ++V LR+ G+C +DV W + + P++ GHE +GVV ++G+ VK V
Sbjct: 31 EVQSEDVSLRITHCGVCYADV-IWTRNMFNDSIY--PLVPGHEIAGVVTEVGADVKGFKV 87
Query: 234 GD 239
GD
Sbjct: 88 GD 89
>11_01_0686 -
5635207-5635323,5635483-5635644,5635727-5635822,
5635903-5635964,5636046-5636121,5636201-5636283,
5636369-5636694,5637524-5637570,5637668-5637804,
5638064-5638097
Length = 379
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +3
Query: 15 KPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 191
KP + V+ P+ E V +++ +C +DV++W+ KGQ F P I GHEA G
Sbjct: 20 KPLVIEEVEVAPPQAME--VRVKILFTSLCHTDVYFWEAKGQTPVF----PRIFGHEAGG 73
Query: 192 VVAKIGSKVKNLTVGDRV 245
+V +G V +L GD V
Sbjct: 74 IVESVGEGVTDLAPGDHV 91
>03_01_0636 -
4664472-4664588,4664695-4664856,4664984-4665061,
4665157-4665221,4665476-4665558,4666052-4666414,
4666512-4666555,4666632-4666765,4666881-4666917
Length = 360
Score = 45.6 bits (103), Expect = 4e-05
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 245
E+ +++ C +C +DV W K P I+GHEA GVV +G V+ L GD V
Sbjct: 37 EIRIKIICTSLCHTDVTLWHKVDPAF-----PRILGHEAYGVVESVGENVEGLAAGDTV 90
>04_04_1128 +
31103582-31103709,31105231-31105344,31105906-31106446,
31106911-31107003,31107041-31107194,31107296-31107498
Length = 410
Score = 44.8 bits (101), Expect = 6e-05
Identities = 25/71 (35%), Positives = 39/71 (54%)
Frame = +3
Query: 63 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 242
+D+V +++ GIC SD+H K + + V P++ GHE +GVV ++G V GD
Sbjct: 47 DDDVAIKVLYCGICHSDLHTI-KNEWRNAVY--PVVAGHEITGVVTEVGKNVARFKAGDE 103
Query: 243 VAIEPACRVGT 275
V + C V T
Sbjct: 104 VGV--GCMVNT 112
>02_05_0070 -
25584690-25584806,25585151-25585312,25585396-25585491,
25585894-25585955,25586035-25586110,25586195-25586277,
25586456-25586778,25586882-25586928,25587014-25587150,
25587250-25587322,25588159-25588251,25588543-25588632,
25588684-25588786,25588869-25588981,25589181-25589778,
25589888-25590065,25590277-25590296,25590713-25590882,
25591245-25591485,25592997-25593199
Length = 994
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQK-GQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 245
E+ +++ IC SDV WQ Q F P I GHEASGVV +G V VGD V
Sbjct: 652 EIRVKVVSTSICRSDVTQWQSTAQTDLF----PRIFGHEASGVVESVGEGVTEFEVGDHV 707
>10_01_0344 -
3777610-3777758,3777870-3777959,3778950-3779025,
3779206-3779288,3780456-3780799,3782064-3782113,
3782406-3782542,3782692-3782776
Length = 337
Score = 44.4 bits (100), Expect = 8e-05
Identities = 24/59 (40%), Positives = 35/59 (59%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 245
EV L++ IC +D+ W KG+ + P I+GHEA+GVV +G V++L GD V
Sbjct: 53 EVRLKVLFTSICHTDLSAW-KGE-NELQRKFPRILGHEAAGVVESVGEGVEDLAPGDHV 109
>04_03_0559 +
17118319-17118396,17119329-17119467,17119569-17119660,
17119974-17120660
Length = 331
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/73 (30%), Positives = 41/73 (56%)
Frame = +3
Query: 27 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 206
L+ V+ P+P + ++E+L++++ + +D QKG F + P I + SG V ++
Sbjct: 25 LKFVEIPVPSLKKNEILIKIEAASLNQADWRI-QKGLMRPFHPKFPFIPVTDVSGEVIEV 83
Query: 207 GSKVKNLTVGDRV 245
GS + VGD+V
Sbjct: 84 GSAIHEFKVGDKV 96
>04_03_0566 +
17209455-17209565,17210159-17210203,17211456-17211569,
17211943-17212081,17212324-17212415,17213245-17213517
Length = 257
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/73 (31%), Positives = 40/73 (54%)
Frame = +3
Query: 27 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 206
L+ V+ P+P + + EVL++++ + D QKG F+ + P I + +G + +
Sbjct: 89 LKHVEIPVPSVKKHEVLIKVEAASVNPIDWSI-QKGMLRPFLPKFPFIPVTDVAGEIVEA 147
Query: 207 GSKVKNLTVGDRV 245
GS V L VGD+V
Sbjct: 148 GSAVHELKVGDKV 160
>09_04_0028 - 13928542-13929538,13929736-13929818
Length = 359
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/63 (36%), Positives = 37/63 (58%)
Frame = +3
Query: 63 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 242
ED+V +++ GIC +D+H K + G+ + P++ GHE GVVA +G+ V GD
Sbjct: 32 EDDVTIKVLYCGICHTDLHTI-KNEWGNAMY--PVVPGHEIVGVVAGVGAGVTRFKAGDT 88
Query: 243 VAI 251
V +
Sbjct: 89 VGV 91
>03_02_0208 +
6420576-6420658,6421640-6421753,6421848-6422379,
6422452-6422605,6422655-6422947
Length = 391
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/69 (33%), Positives = 40/69 (57%)
Frame = +3
Query: 45 PIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKN 224
P+ +++V++++ GIC SD+ K + G+ + P++ GHE GVVA++GS V
Sbjct: 26 PLRAKGDEDVVVKILFCGICHSDLSTI-KNEWGN--AKYPVVPGHEIVGVVAEVGSSVAR 82
Query: 225 LTVGDRVAI 251
GD V +
Sbjct: 83 FAAGDTVGV 91
>09_04_0031 + 13946692-13946774,13947007-13948012
Length = 362
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 63 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 242
ED+V +++ GIC +D+H K + G+ + P++ GHE GVV +G+ V GD
Sbjct: 32 EDDVTIKVLYCGICHTDLHII-KNEWGNAMY--PVVPGHEIVGVVTGVGAGVTKFKAGDT 88
Query: 243 VAI 251
V +
Sbjct: 89 VGV 91
>08_02_0503 -
17848739-17849004,17849109-17849268,17849368-17849691,
17849787-17850209
Length = 390
Score = 41.9 bits (94), Expect = 4e-04
Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%)
Frame = +3
Query: 48 IPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE---PMIMGHEASGVVAKIGSKV 218
+P+I++D+VL+R+ + D K + G F + P + G++ +GVV K G KV
Sbjct: 104 VPDIADDQVLVRVAAAALNPVDA----KRRAGKFKATDSPLPTVPGYDVAGVVVKAGRKV 159
Query: 219 KNLTVGDRV 245
K L GD V
Sbjct: 160 KGLKEGDEV 168
>01_06_0737 +
31592562-31592786,31593314-31593541,31593981-31594054,
31594595-31594754,31595979-31596098,31596185-31596293,
31597447-31597628
Length = 365
Score = 41.9 bits (94), Expect = 4e-04
Identities = 29/94 (30%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Frame = +3
Query: 45 PIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE--PMIMGHEASGVVAKIGSKV 218
P+P++ +VL+R V I D+ + G + E P+I+G + SG VA G+ V
Sbjct: 51 PVPDLKPGDVLVRARAVSINPLDLR--MRSGYGRSIFEPVLPLIIGRDISGEVAATGTSV 108
Query: 219 KNLTVGDRV--AIEPACRVGTASS---VRQDDTT 305
+ T+G V A+ P GT + + QD+ T
Sbjct: 109 SSFTIGQEVFGALHPTAIRGTYTDYAILSQDELT 142
>08_01_1024 -
10349061-10349200,10349373-10350040,10350478-10350591,
10351956-10352032
Length = 332
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/74 (32%), Positives = 40/74 (54%)
Frame = +3
Query: 63 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 242
+D+V++++ GIC SD+H K + + P++ GHE +GVV + G V GD+
Sbjct: 30 DDDVVIKILYCGICHSDLHSI-KNEWKNATY--PLVPGHEIAGVVTEAGKNVTKFKGGDK 86
Query: 243 VAIEPACRVGTASS 284
V + C V + S
Sbjct: 87 VGV--GCMVNSCHS 98
>03_01_0012 - 101584-101898,102274-102531,102932-103474
Length = 371
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/77 (33%), Positives = 37/77 (48%)
Frame = +3
Query: 18 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 197
P LR Q + E E E+ ++ +G+ DV+Y Q G + P + G EA GVV
Sbjct: 58 PEVLRWEQVEVGEPKEGEIRIKNTAIGVNFIDVYYRQ----GVYSAPLPFVPGREAVGVV 113
Query: 198 AKIGSKVKNLTVGDRVA 248
+G + VGD VA
Sbjct: 114 TAVGPGLTGRKVGDVVA 130
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +3
Query: 63 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 242
+D+V +++ GIC +D+H K G+ + P++ GHE GVV +G+ V GD
Sbjct: 32 DDDVTIKVLYCGICHTDLHI-VKNDWGNAMY--PVVPGHEIVGVVTGVGAGVTKFKAGDT 88
Query: 243 VAI 251
V +
Sbjct: 89 VGV 91
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/63 (33%), Positives = 35/63 (55%)
Frame = +3
Query: 63 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 242
+D+V +++ GIC +D+H K G+ + P++ GHE GVV +G+ V GD
Sbjct: 32 DDDVTIKVLYCGICHTDLHV-VKNDWGNAMY--PVVPGHEIVGVVTGVGAGVTKFKAGDT 88
Query: 243 VAI 251
V +
Sbjct: 89 VGV 91
>09_04_0636 +
19150966-19151037,19151150-19151291,19151404-19151492,
19151589-19152308
Length = 340
Score = 39.9 bits (89), Expect = 0.002
Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Frame = +3
Query: 27 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE-PMIMGHEASGVVAK 203
L+ V+ PIP + EVL++M+ I D + QKG F+ + P I ++ +G V +
Sbjct: 23 LKHVEVPIPTPKKGEVLIKMEAGSINQVDWKF-QKGVARPFMPNKFPFIPVYDLAGEVVE 81
Query: 204 IGSKVKNLTVGDRV 245
+G V + VGD+V
Sbjct: 82 LGRGVSSFKVGDKV 95
>02_01_0656 -
4870315-4870975,4872018-4872245,4872874-4872987,
4873813-4873901
Length = 363
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +3
Query: 66 DEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 245
++V++++ GIC +D+H K G + PM+ GHE G V ++G +V + GD V
Sbjct: 35 EDVVVKVLYCGICHTDIHQ-AKNHLG--ASKYPMVPGHEVVGEVVEVGPEVTKYSAGDVV 91
Query: 246 AI 251
+
Sbjct: 92 GV 93
>04_03_0629 +
18179065-18179148,18180146-18180287,18180987-18181078,
18181272-18181964
Length = 336
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 27 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE-PMIMGHEASGVVAK 203
L+ V+ P+P ++EVLL+++ I D QKG + P I + +GVVA
Sbjct: 27 LKHVEVPVPSAKKNEVLLKLEAATINPVDWKI-QKGMLRPLLPRRLPFIPVTDVAGVVAG 85
Query: 204 IGSKVKNLTVGDRV 245
+G V + VGD+V
Sbjct: 86 VGPGVNDFAVGDQV 99
>09_04_0641 +
19172370-19172459,19172539-19172680,19172951-19173039,
19173096-19173806
Length = 343
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Frame = +3
Query: 27 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFV-LEEPMIMGHEASGVVAK 203
L+ V+ PIP + EVL++M+ I D QKG F+ + P I + +G VA
Sbjct: 29 LKHVEVPIPSPKKGEVLIKMEAASINPIDWKI-QKGMLRPFLPWKFPSIPACDLAGKVAA 87
Query: 204 IGSKVKNLTVGDRV 245
+G V+ +GD+V
Sbjct: 88 VGGGVRRFELGDKV 101
>02_05_1209 +
34948899-34948938,34949086-34949222,34949854-34949900,
34949990-34950315,34950640-34950722,34950801-34950876,
34951499-34951656,34951979-34952140,34952235-34952351
Length = 381
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Frame = +3
Query: 15 KPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 191
+P + VQ P+ E V +++ +C +D + W K G F P I+GHEA+G
Sbjct: 22 RPMTIEDVQVAPPQAGE--VRVKILFTALCHTDHYTWSGKDPEGLF----PCILGHEAAG 75
Query: 192 VVAKIGSKVKNLTVGDRV 245
+V +G V + GD V
Sbjct: 76 IVESVGEGVTEVQPGDHV 93
Score = 29.5 bits (63), Expect = 2.5
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 266 CRYCEFCKTGRYHLC 310
CR C+FCK+G+ +LC
Sbjct: 101 CRECKFCKSGKTNLC 115
>08_01_0065 +
452383-452629,452733-452868,453049-453118,453237-453330,
453426-453639,453756-453897,454076-454246,454586-454780
Length = 422
Score = 37.9 bits (84), Expect = 0.007
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +1
Query: 541 AKAFGAHKVLIIDILQSRLDFAKSLGADYTLLIGKD 648
AKAFGA +V+ +D+L +L A++LGA +T+ K+
Sbjct: 259 AKAFGASEVIAVDVLDEKLQNARTLGATHTVNAAKE 294
Score = 35.5 bits (78), Expect = 0.039
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 3 ALLYKPN-DLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGH 179
A+ ++P L L +P E+L++ G+C SD+H + G P ++GH
Sbjct: 53 AVFWEPGRPLTLEDFRMPRPKAGELLIKTKACGVCHSDLHVLK----GELPFSSPCVVGH 108
Query: 180 EASGVVAKIGS 212
E +G V G+
Sbjct: 109 EITGEVVDHGT 119
>06_03_1023 -
26952195-26952635,26952723-26952934,26953038-26953757,
26955042-26955735
Length = 688
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 80 AHGLRGYLRVRRPLLAEGSMRTLRAGRTNDHGTRSFRSSGQDRFESQE 223
AHG G ++P + ++ R GR +DHG F G++RFE ++
Sbjct: 334 AHGGGGGGGEQQPHVTVSAVPAKRGGRRDDHGRLVFIQEGRERFELED 381
>03_01_0635 -
4660692-4660737,4660783-4660829,4661371-4661507,
4661661-4661697
Length = 88
Score = 31.5 bits (68), Expect = 0.63
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASG 191
EV +++ C +C SDV +W+ F P I GHEA G
Sbjct: 37 EVRIKIVCTSLCHSDVTFWRMQD---FPGVFPRIFGHEAFG 74
>09_04_0156 - 15190502-15190903,15191149-15191154,15191512-15192351
Length = 415
Score = 29.5 bits (63), Expect = 2.5
Identities = 17/66 (25%), Positives = 27/66 (40%)
Frame = +2
Query: 92 RGYLRVRRPLLAEGSMRTLRAGRTNDHGTRSFRSSGQDRFESQESDSW*SSGHRAGVPCR 271
R + R LL ++ LR+G + T + + E E+ W SS H
Sbjct: 326 RALVEHRASLLHRSNLAPLRSG---NKATTEAAQPAEKKTEKPEASEWNSSAHHHQNRMY 382
Query: 272 YCEFCK 289
YC+ C+
Sbjct: 383 YCDICE 388
>03_06_0399 -
33632811-33633107,33633236-33633385,33633705-33634029,
33635315-33635982,33636967-33637212,33637405-33637545,
33637807-33637856,33637943-33638060,33638304-33638910,
33639339-33639463,33639813-33639869,33639952-33640023,
33640100-33640232,33640305-33640428,33640522-33640576,
33640672-33641322
Length = 1272
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 371 HAADFCFKLPDHVTMEEGALLEPLAVGIHACKRGG-VSAGHVVLVLGRDPSASLPCSQL 544
H + F L + + E +L++ L + +RG V++ H +L +GRD SAS S L
Sbjct: 610 HNSSFISPLENDSSREVFSLIKKLNIAPQPKRRGKQVTSNHELLTVGRDNSASSKSSFL 668
>03_05_0059 -
20359480-20359552,20359690-20359777,20360255-20360326,
20361765-20361963
Length = 143
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = +2
Query: 380 DFCFKLPDHVTMEEGALLEPLAVGIHACKRGGVSAGHVVLVLG 508
DFCF +P + G +L G A GG AG ++L+ G
Sbjct: 3 DFCFTIPYGFAVLAGGVLGYARRGSTASLAGGAGAGALLLLAG 45
>12_01_0379 - 2949962-2950540
Length = 192
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = -1
Query: 352 VSVYWGRGAEDHVRA*VVSSCLTELAVPTRHAGSMATRSPTVRFLTFEPIL 200
V +YW H+RA V S+ LT L V AG+ + VR + P L
Sbjct: 26 VLIYWAIFQPHHIRATVASADLTNLTV----AGAAVSYKLAVRLNLYNPSL 72
>01_07_0370 -
43119049-43120278,43121376-43121420,43121421-43121662,
43121908-43122686,43123123-43123463,43123565-43123785,
43123866-43124176,43124257-43124516,43124836-43124918,
43124940-43125036,43125132-43125305,43126215-43126592
Length = 1386
Score = 27.9 bits (59), Expect = 7.7
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Frame = -1
Query: 301 VSSCLTELAVPTRHAGSMATRSPTV-RFLTFEPILATTPEASCPMIIGSSSTKCPH*PFC 125
+ S +E TR + R+P++ R +FE L P+ P+ SS+T P P
Sbjct: 684 IQSPPSEQMAETRLPTVASERAPSIKRQDSFEMKLPDLPKIDVPLHRQSSNTSDPESPIS 743
Query: 124 Q*WTSDPQ 101
TSDP+
Sbjct: 744 PLLTSDPK 751
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,566,750
Number of Sequences: 37544
Number of extensions: 468884
Number of successful extensions: 1484
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1464
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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