Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0108
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical pr... 139 2e-33
Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical pr... 128 3e-30
AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical ... 79 2e-15
Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical pr... 63 1e-10
Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical pr... 46 2e-05
AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical ... 37 0.011
AF067618-4|AAY44003.1| 381|Caenorhabditis elegans Hypothetical ... 36 0.026
U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol dehydro... 34 0.10
AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical ... 34 0.10
AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical ... 33 0.14
Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical... 28 5.2
Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical p... 27 9.1
AC024817-14|AAY86301.1| 354|Caenorhabditis elegans Hypothetical... 27 9.1
>Z70782-3|CAA94841.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.5 protein.
Length = 347
Score = 139 bits (336), Expect = 2e-33
Identities = 58/87 (66%), Positives = 70/87 (80%)
Frame = +2
Query: 257 GVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAADFCFKLPDHVTMEEGALLE 436
G+PC+ CE CKTGRY+LCP+M F ATPPVHG L R+ H ADFCFKLPD+++ E+GAL+E
Sbjct: 93 GLPCKLCEHCKTGRYNLCPEMRFFATPPVHGTLSRFVVHDADFCFKLPDNLSFEDGALIE 152
Query: 437 PLAVGIHACKRGGVSAGHVVLVLGRDP 517
PL+V IHAC+RG V GH VLVLG P
Sbjct: 153 PLSVAIHACRRGNVQMGHRVLVLGAGP 179
Score = 114 bits (275), Expect = 5e-26
Identities = 49/85 (57%), Positives = 69/85 (81%)
Frame = +3
Query: 3 ALLYKPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHE 182
A+LY +DLRL Q PIP+ ++VL+++ VGICGSDVHYW G G FV++EPMI+GHE
Sbjct: 8 AVLYGVDDLRLEQVPIPKPGPNQVLVKVHTVGICGSDVHYWTHGAIGPFVVKEPMIVGHE 67
Query: 183 ASGVVAKIGSKVKNLTVGDRVAIEP 257
SG+V+++G++VK+L VGDR+A+EP
Sbjct: 68 TSGIVSEVGNEVKHLKVGDRIAMEP 92
Score = 36.7 bits (81), Expect = 0.015
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 3/46 (6%)
Frame = +1
Query: 541 AKAFGAHKVLIIDILQSRLDFAKSLGADYTLLI-GK--DSNEAELV 669
AKA GA KV+I D+ RL AK LGAD T+ + GK D+ ++E++
Sbjct: 188 AKAVGAGKVVITDLDDGRLALAKKLGADATINVKGKSLDAVKSEII 233
>Z70782-4|CAA94842.1| 347|Caenorhabditis elegans Hypothetical
protein R04B5.6 protein.
Length = 347
Score = 128 bits (310), Expect = 3e-30
Identities = 58/103 (56%), Positives = 72/103 (69%)
Frame = +2
Query: 257 GVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAADFCFKLPDHVTMEEGALLE 436
G+PC+ CE CK GRY+LCPDM F ATPPV+G L R+ H ADFCFKLPD+++ E+GALLE
Sbjct: 93 GLPCKLCEHCKIGRYNLCPDMRFFATPPVNGALSRFVVHDADFCFKLPDNLSFEDGALLE 152
Query: 437 PLAVGIHACKRGGVSAGHVVLVLGRDPSASLPCSQLKPLEHTK 565
PL+V I AC+RG V G +LVLG P L K + +K
Sbjct: 153 PLSVAIQACRRGTVQMGQKILVLGAGPIGVLNLLTAKAIGASK 195
Score = 106 bits (255), Expect = 1e-23
Identities = 48/85 (56%), Positives = 66/85 (77%)
Frame = +3
Query: 3 ALLYKPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHE 182
A+LY NDLRL Q PI + +VL++++ VGICGSDVH+ G G FV++EPM++GHE
Sbjct: 8 AVLYGINDLRLEQAPISKPGPRQVLVKINTVGICGSDVHFLTHGAIGSFVVKEPMVLGHE 67
Query: 183 ASGVVAKIGSKVKNLTVGDRVAIEP 257
+SGVV++IGS+VK VGDR+A+EP
Sbjct: 68 SSGVVSEIGSEVKGFKVGDRIAMEP 92
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 541 AKAFGAHKVLIIDILQSRLDFAKSLGADYTL-LIGKDSNE 657
AKA GA KV+I D+ RL A+ LGAD T+ ++GK S+E
Sbjct: 188 AKAIGASKVVITDLNDERLALARLLGADATINVMGKRSDE 227
>AF125951-1|AAD14690.3| 326|Caenorhabditis elegans Hypothetical
protein D2063.1 protein.
Length = 326
Score = 79.4 bits (187), Expect = 2e-15
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +3
Query: 27 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 206
L + Q PIP+ +EDE+L++M+ GIC SDVH W G H+V + PMI GHE +G V +
Sbjct: 22 LEIKQLPIPQPNEDELLVKMEYSGICHSDVHTWL-GDF-HYVSKCPMIGGHEGAGSVISV 79
Query: 207 GSKVKNLTVGDRVAIE 254
GSKVKN +GD+V I+
Sbjct: 80 GSKVKNWQIGDKVGIK 95
Score = 33.1 bits (72), Expect = 0.18
Identities = 23/82 (28%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Frame = +2
Query: 266 CRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAADFCFKLPDHVTMEEGA-LLEPL 442
C CE+C+TG LCP ++ +G Y K+P + M A +L
Sbjct: 101 CLNCEYCQTGHEPLCPH-VWNIGVQKYGTFQEYATIRDVDAIKIPKSMNMAAAAPVLCGG 159
Query: 443 AVGIHACKRGGVSAGHVVLVLG 508
A K V +G +V V G
Sbjct: 160 VTAYKALKESEVKSGQIVAVTG 181
>Z81570-3|CAB04603.1| 351|Caenorhabditis elegans Hypothetical
protein K12G11.4 protein.
Length = 351
Score = 63.3 bits (147), Expect = 1e-10
Identities = 32/78 (41%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Frame = +3
Query: 27 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE--PMIMGHEASGVVA 200
L + Q +P+ E+E+L++++ GIC SD+H W+ G F P+I GHE +G V
Sbjct: 22 LEVRQVSVPQPQENELLVKIEYSGICHSDLHTWE----GDFEYASICPLIGGHEGAGTVV 77
Query: 201 KIGSKVKNLTVGDRVAIE 254
IGSKVK +GDR I+
Sbjct: 78 TIGSKVKGWNIGDRAGIK 95
Score = 28.3 bits (60), Expect = 5.2
Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 6/94 (6%)
Frame = +2
Query: 245 GHRAGVP-----CRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAADFCFKLPDHV 409
G RAG+ C CE+CKTG LC D I HG Y K+ +
Sbjct: 89 GDRAGIKLINANCLNCEYCKTGHEPLC-DHIQNYGIDRHGTFQEYLTIRDIDAIKVSNDT 147
Query: 410 TMEEGA-LLEPLAVGIHACKRGGVSAGHVVLVLG 508
+ A +L + K V G +V++ G
Sbjct: 148 NLAAAAPVLCGGVTAYKSLKATNVKPGQIVVLTG 181
>Z81570-2|CAB04604.1| 349|Caenorhabditis elegans Hypothetical
protein K12G11.3 protein.
Length = 349
Score = 57.2 bits (132), Expect = 1e-08
Identities = 26/76 (34%), Positives = 44/76 (57%)
Frame = +3
Query: 27 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKI 206
L + Q P+P ++DE+L++++ GIC SD+H W V P++ GHE +G V +I
Sbjct: 21 LEVRQVPVPSPADDEILVKIEYSGICHSDLHVWLGDLKDMSVC--PLVGGHEGAGSVVQI 78
Query: 207 GSKVKNLTVGDRVAIE 254
G V +GD+ ++
Sbjct: 79 GKNVTGWQLGDKAGVK 94
>Z92834-3|CAB07384.1| 328|Caenorhabditis elegans Hypothetical
protein F39B2.3 protein.
Length = 328
Score = 46.0 bits (104), Expect = 2e-05
Identities = 25/76 (32%), Positives = 42/76 (55%)
Frame = +3
Query: 18 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 197
P+ + V++ +P + +++VL+R G+ D Y + GQ G P + G + +G V
Sbjct: 21 PDVIEAVESDMPRLEKNQVLVRNYAAGVNPVDT-YIRAGQYGKLP-NLPYVPGKDGAGFV 78
Query: 198 AKIGSKVKNLTVGDRV 245
+G VKN+ VGDRV
Sbjct: 79 ELVGESVKNVKVGDRV 94
>AC006663-3|AAL32231.1| 386|Caenorhabditis elegans Hypothetical
protein H24K24.3b protein.
Length = 386
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/85 (27%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Frame = +3
Query: 18 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 197
P + +Q P+ E V ++ +C +D Y G + P+++GHE SG+V
Sbjct: 22 PLSIETIQVAPPKAHEVRVKFQILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 78
Query: 198 AKIGSKVKNLTVGDRVA--IEPACR 266
+G V GD V P C+
Sbjct: 79 ESVGEGVTGFAPGDHVVPLYVPQCK 103
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 541 AKAFGAHKVLIIDILQSRLDFAKSLGA 621
AKA GA K++ ID+++S+ + AK GA
Sbjct: 216 AKAAGAKKIVGIDLIESKFESAKFFGA 242
>AF067618-4|AAY44003.1| 381|Caenorhabditis elegans Hypothetical
protein F56H1.6 protein.
Length = 381
Score = 35.9 bits (79), Expect = 0.026
Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 14/108 (12%)
Frame = +3
Query: 27 LRLVQTPIPEISED-EVLLRMDCVGICGSDVHY-----------WQKGQ-CGHFVLEEPM 167
+ L + P+P I++ +VLL++ + DV W+K + C P+
Sbjct: 29 VELKEVPLPVINKPGQVLLKVKAASVNPIDVDMSQGYGREFLGTWKKIESCDAAASRFPL 88
Query: 168 IMGHEASGVVAKIGSKVKNLTVGDRV-AIEPACRVGTASSVRQDDTTY 308
I G + + VV +G V NL GD V A+ P GT + D+ Y
Sbjct: 89 IPGRDCTAVVESVGGDVHNLAPGDEVMAVVPVILPGTHAEFVVTDSKY 136
>U18781-1|AAB03374.1| 384|Caenorhabditis elegans alcohol
dehydrogenase protein.
Length = 384
Score = 33.9 bits (74), Expect = 0.10
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +3
Query: 18 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 197
P + +Q P+ E V +++ +C +D Y G + P+++GHE SG+V
Sbjct: 22 PLSIETIQVAPPKAHE--VRVKILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 76
Query: 198 AKIGSKVKNLTVGDRVA--IEPACR 266
+G V GD V P C+
Sbjct: 77 ESVGEGVTGFAPGDHVVPLYVPQCK 101
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 541 AKAFGAHKVLIIDILQSRLDFAKSLGA 621
AKA GA K++ ID+++S+ + AK GA
Sbjct: 214 AKAAGAKKIVGIDLIESKFESAKFFGA 240
>AC006663-4|AAF39899.1| 384|Caenorhabditis elegans Hypothetical
protein H24K24.3a protein.
Length = 384
Score = 33.9 bits (74), Expect = 0.10
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 2/85 (2%)
Frame = +3
Query: 18 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 197
P + +Q P+ E V +++ +C +D Y G + P+++GHE SG+V
Sbjct: 22 PLSIETIQVAPPKAHE--VRVKILYTAVCHTDA-YTLDGHDPEGLF--PVVLGHEGSGIV 76
Query: 198 AKIGSKVKNLTVGDRVA--IEPACR 266
+G V GD V P C+
Sbjct: 77 ESVGEGVTGFAPGDHVVPLYVPQCK 101
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 541 AKAFGAHKVLIIDILQSRLDFAKSLGA 621
AKA GA K++ ID+++S+ + AK GA
Sbjct: 214 AKAAGAKKIVGIDLIESKFESAKFFGA 240
>AC025722-1|AAK68507.1| 554|Caenorhabditis elegans Hypothetical
protein Y50D4C.2 protein.
Length = 554
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +3
Query: 162 PMIMGHEASGVVAKIGSKVKNLTVGDRVA--IEPACR 266
P+++GHE SG+V +G V GD V P C+
Sbjct: 238 PVVLGHEGSGIVESVGKGVTGFAPGDHVVPLYVPQCK 274
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 541 AKAFGAHKVLIIDILQSRLDFAKSLGA 621
AKA GA K++ ID+++S+ + AK GA
Sbjct: 387 AKAAGAKKIVGIDLIESKFEKAKMFGA 413
>Z82081-5|CAB04958.1| 344|Caenorhabditis elegans Hypothetical
protein W09H1.5 protein.
Length = 344
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +3
Query: 162 PMIMGHEASGVVAKIGSKVKNLTVGDRV 245
P + G+E G V +GS V ++ VGD V
Sbjct: 76 PAVGGNEGFGKVISVGSNVSSIKVGDHV 103
>Z99171-2|CAB16314.1| 710|Caenorhabditis elegans Hypothetical
protein F47G4.2 protein.
Length = 710
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 5/67 (7%)
Frame = -3
Query: 254 LYGHSITNCQI-----LDFRTDLGHYS*SFVSHDHWFFQHEVSALTLLPVVDV*PADTHA 90
LY I+NC + + +L H S + ++ W+ E+ AL LL V+D+ TH
Sbjct: 164 LYSLDISNCGVTILTGISRLKNLRHLSLRSLIYESWYDIRELFALKLLNVLDLSMHSTH- 222
Query: 89 VHAQQDL 69
HA++++
Sbjct: 223 -HARRNM 228
>Z72504-4|CAH60755.1| 653|Caenorhabditis elegans Hypothetical
protein C29E6.1b protein.
Length = 653
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = +3
Query: 186 SGVVAKIGSKVKNLTVGDRVAIEPACRVGTASSVRQDDTTYALT*SSAPRPQYTETSSDI 365
SGV AK + K+ D + P V T+++V + T ++ P+P TET++
Sbjct: 315 SGVKAKDPANTKSSAHLDNSDV-PTTTVQTSTTVPTTPSKTTATTTTTPKPTTTETATTS 373
Query: 366 TSTQLI 383
+ST +
Sbjct: 374 SSTTTV 379
>AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical
protein C23H5.1 protein.
Length = 252
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 272 TDTARRLYGHSITNCQILDFRTDLGHYS*SFV 177
T T ++ +GH + ++LD GHYS F+
Sbjct: 24 TPTIKKAFGHILVGKEVLDVGCGNGHYSFDFL 55
>Z36753-10|CAA85341.1| 708|Caenorhabditis elegans Hypothetical
protein T09A5.12 protein.
Length = 708
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -2
Query: 537 EHGKEADGSRPSTSTTCPAETPPLLH 460
E+G + D +RP+++ PA+ PP H
Sbjct: 160 EYGNKFDENRPASNMYVPAQEPPKQH 185
>AC024817-14|AAY86301.1| 354|Caenorhabditis elegans Hypothetical
protein Y54G2A.45 protein.
Length = 354
Score = 27.5 bits (58), Expect = 9.1
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 275 CEFCKTGRYHLCPDMIFCATP 337
CE C YH C D C TP
Sbjct: 21 CETCLGSGYHYCADSKLCNTP 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,474,511
Number of Sequences: 27780
Number of extensions: 357930
Number of successful extensions: 1108
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1019
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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