Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0108
(670 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee homeobox-... 26 0.37
M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee homeobox-... 26 0.37
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 26 0.37
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 25 0.49
M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee homeobox-... 25 0.86
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 2.0
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 2.0
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 2.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 23 3.5
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 21 8.0
AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 21 8.0
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 8.0
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 8.0
>M29493-1|AAA27728.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H90. ).
Length = 74
Score = 25.8 bits (54), Expect = 0.37
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 4 LCCTNQMICVWYKHRSLKYLK 66
LC T + I +W+++R +K+ K
Sbjct: 45 LCLTERQIKIWFQNRRMKWKK 65
>M29488-1|AAA27723.1| 86|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H55. ).
Length = 86
Score = 25.8 bits (54), Expect = 0.37
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 4 LCCTNQMICVWYKHRSLKYLK 66
LC T + I +W+++R +K+ K
Sbjct: 45 LCLTERQIKIWFQNRRMKWKK 65
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 25.8 bits (54), Expect = 0.37
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +1
Query: 4 LCCTNQMICVWYKHRSLKYLK 66
LC T + I +W+++R +K+ K
Sbjct: 307 LCLTERQIKIWFQNRRMKWKK 327
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 25.4 bits (53), Expect = 0.49
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 441 SRWAFTRARGAESRRDTWCWYWDGTHRPPY 530
S W A D WC Y+ G RP Y
Sbjct: 937 SSWVSDNAHKVVDASDVWC-YYGGDARPAY 965
>M29494-1|AAA27729.1| 74|Apis mellifera protein ( Bee
homeobox-containing gene,partial cds, clone H15. ).
Length = 74
Score = 24.6 bits (51), Expect = 0.86
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +1
Query: 4 LCCTNQMICVWYKHRSLKYLK 66
LC T + I +W+++R +K K
Sbjct: 45 LCLTERQIKIWFQNRRMKLKK 65
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 336 GVAQKIMSGHRWYRPVLQNSQYRHGTPALWPLDHQLSD 223
G+A M+ + +Y PV S Y T D+Q +D
Sbjct: 255 GMALSPMTNNLYYSPVASTSLYYVNTEQFRTSDYQQND 292
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 336 GVAQKIMSGHRWYRPVLQNSQYRHGTPALWPLDHQLSD 223
G+A M+ + +Y PV S Y T D+Q +D
Sbjct: 255 GMALSPMTNNLYYSPVASTSLYYVNTEQFRTSDYQQND 292
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 23.4 bits (48), Expect = 2.0
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 336 GVAQKIMSGHRWYRPVLQNSQYRHGTPALWPLDHQLSD 223
G+A M+ + +Y PV S Y T D+Q +D
Sbjct: 255 GMALSPMTNNLYYSPVASTSLYYVNTEQFRTSDYQQND 292
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.6 bits (46), Expect = 3.5
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 513 THRPPYHAHS*SLWSTQSTHNRYP 584
T PP+H H S Q H R P
Sbjct: 346 TMGPPHHHHHHQTQSLQHLHYRQP 369
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 21.4 bits (43), Expect = 8.0
Identities = 6/12 (50%), Positives = 8/12 (66%)
Frame = +3
Query: 495 CWYWDGTHRPPY 530
CW + THRP +
Sbjct: 874 CWQKERTHRPTF 885
>AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein.
Length = 602
Score = 21.4 bits (43), Expect = 8.0
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 324 SAPRPQYTETSSDI 365
S P PQY TSS I
Sbjct: 436 SQPSPQYPSTSSHI 449
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 8.0
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +3
Query: 177 HEASGVVAKIGSKVKNLTVGDRVAIEP 257
H A VVA S V N+T + P
Sbjct: 943 HSAQSVVASSASNVTNVTTNLTTILPP 969
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.4 bits (43), Expect = 8.0
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2
Query: 561 VCSKGFSCEH 532
+CS G+ CEH
Sbjct: 373 ICSNGWICEH 382
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,367
Number of Sequences: 438
Number of extensions: 4079
Number of successful extensions: 20
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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