Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0108
(670 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative / L-id... 115 3e-26
At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative / L-id... 115 3e-26
At4g34230.1 68417.m04864 cinnamyl-alcohol dehydrogenase, putativ... 52 3e-07
At3g19450.1 68416.m02466 cinnamyl-alcohol dehydrogenase (CAD) id... 50 1e-06
At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putativ... 49 2e-06
At4g37970.1 68417.m05366 mannitol dehydrogenase, putative simila... 49 3e-06
At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar... 48 7e-06
At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical t... 48 7e-06
At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar... 47 1e-05
At4g37990.1 68417.m05368 mannitol dehydrogenase, putative (ELI3-... 45 4e-05
At3g15090.1 68416.m01908 oxidoreductase, zinc-binding dehydrogen... 44 9e-05
At1g23740.1 68414.m02996 oxidoreductase, zinc-binding dehydrogen... 43 2e-04
At5g43940.1 68418.m05376 alcohol dehydrogenase class III / gluta... 43 2e-04
At4g37980.1 68417.m05367 mannitol dehydrogenase, putative (ELI3-... 43 2e-04
At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar... 42 3e-04
At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar... 42 3e-04
At4g13010.1 68417.m02030 oxidoreductase, zinc-binding dehydrogen... 42 5e-04
At2g21890.1 68415.m02601 mannitol dehydrogenase, putative simila... 42 5e-04
At2g21730.1 68415.m02585 mannitol dehydrogenase, putative simila... 42 5e-04
At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar... 40 0.001
At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar... 40 0.001
At4g39330.1 68417.m05568 mannitol dehydrogenase, putative nearly... 40 0.001
At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogen... 40 0.002
At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogen... 40 0.002
At4g22110.2 68417.m03197 alcohol dehydrogenase, putative similar... 40 0.002
At4g22110.1 68417.m03196 alcohol dehydrogenase, putative similar... 40 0.002
At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar... 36 0.024
At4g21580.1 68417.m03122 oxidoreductase, zinc-binding dehydrogen... 35 0.056
At3g45770.1 68416.m04948 oxidoreductase, zinc-binding dehydrogen... 35 0.056
At5g61510.1 68418.m07718 NADP-dependent oxidoreductase, putative... 32 0.30
At1g65020.1 68414.m07369 expressed protein 30 1.6
At3g56460.1 68416.m06279 oxidoreductase, zinc-binding dehydrogen... 29 2.1
At5g47600.1 68418.m05875 heat shock protein-related contains wea... 29 3.7
At1g50740.1 68414.m05706 expressed protein contains Pfam profile... 29 3.7
At1g13200.1 68414.m01531 F-box family protein contains F-box dom... 28 4.9
At5g15600.1 68418.m01825 expressed protein 28 6.5
At1g69280.1 68414.m07943 expressed protein 28 6.5
At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger) fa... 28 6.5
>At5g51970.2 68418.m06450 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 115 bits (276), Expect = 3e-26
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +2
Query: 257 GVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAADFCFKLPDHVTMEEGALLE 436
G+ C C C+ GRY+LCP+M F ATPPVHG+L H AD CFKLP++V++EEGA+ E
Sbjct: 106 GISCWRCNLCREGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCE 165
Query: 437 PLAVGIHACKRGGVSAGHVVLVLGRDP 517
PL+VG+HAC+R V VLV+G P
Sbjct: 166 PLSVGVHACRRAEVGPETNVLVMGAGP 192
Score = 93.9 bits (223), Expect = 9e-20
Identities = 38/79 (48%), Positives = 58/79 (73%)
Frame = +3
Query: 21 NDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVA 200
N L++ +P + +V +RM VGICGSDVHY + +C FV++EPM++GHE +G++
Sbjct: 27 NTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIE 86
Query: 201 KIGSKVKNLTVGDRVAIEP 257
++G +VK+L VGDRVA+EP
Sbjct: 87 EVGEEVKHLVVGDRVALEP 105
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 541 AKAFGAHKVLIIDILQSRLDFAKSLGAD 624
A+AF +++I+D+ ++RL AK LGAD
Sbjct: 201 ARAFSVPRIVIVDVDENRLAVAKQLGAD 228
>At5g51970.1 68418.m06449 sorbitol dehydrogenase, putative /
L-iditol 2-dehydrogenase, putative similar to
NAD-dependent sorbitol dehydrogenase from Malus x
domestica [gi:4519539]
Length = 364
Score = 115 bits (276), Expect = 3e-26
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +2
Query: 257 GVPCRYCEFCKTGRYHLCPDMIFCATPPVHGNLVRYYKHAADFCFKLPDHVTMEEGALLE 436
G+ C C C+ GRY+LCP+M F ATPPVHG+L H AD CFKLP++V++EEGA+ E
Sbjct: 106 GISCWRCNLCREGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCE 165
Query: 437 PLAVGIHACKRGGVSAGHVVLVLGRDP 517
PL+VG+HAC+R V VLV+G P
Sbjct: 166 PLSVGVHACRRAEVGPETNVLVMGAGP 192
Score = 93.9 bits (223), Expect = 9e-20
Identities = 38/79 (48%), Positives = 58/79 (73%)
Frame = +3
Query: 21 NDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVA 200
N L++ +P + +V +RM VGICGSDVHY + +C FV++EPM++GHE +G++
Sbjct: 27 NTLKIQPFLLPSVGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIE 86
Query: 201 KIGSKVKNLTVGDRVAIEP 257
++G +VK+L VGDRVA+EP
Sbjct: 87 EVGEEVKHLVVGDRVALEP 105
Score = 32.3 bits (70), Expect = 0.30
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +1
Query: 541 AKAFGAHKVLIIDILQSRLDFAKSLGAD 624
A+AF +++I+D+ ++RL AK LGAD
Sbjct: 201 ARAFSVPRIVIVDVDENRLAVAKQLGAD 228
>At4g34230.1 68417.m04864 cinnamyl-alcohol dehydrogenase, putative
similar to cinnamyl alcohol dehydrogenase, Nicotiana
tabacum [SP|P30359], Populus deltoides, PATCHX:G288753
Length = 357
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/73 (39%), Positives = 40/73 (54%)
Frame = +3
Query: 54 EISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTV 233
E ++V +R+ C GIC +D+H K G + PM+ GHE G V ++GS V TV
Sbjct: 31 ETGPEDVNIRIICCGICHTDLHQ-TKNDLG--MSNYPMVPGHEVVGEVVEVGSDVSKFTV 87
Query: 234 GDRVAIEPACRVG 272
GD V + C VG
Sbjct: 88 GDIVGV--GCLVG 98
>At3g19450.1 68416.m02466 cinnamyl-alcohol dehydrogenase (CAD)
identical to SP|P48523 Cinnamyl-alcohol dehydrogenase
(EC 1.1.1.195) (CAD) [Arabidopsis thaliana]
Length = 365
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/62 (40%), Positives = 36/62 (58%)
Frame = +3
Query: 66 DEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 245
D+V +++ C GIC +D+H K G + PM+ GHE G V ++GS V TVGD V
Sbjct: 36 DDVYIKVICCGICHTDIHQI-KNDLG--MSNYPMVPGHEVVGEVLEVGSDVSKFTVGDVV 92
Query: 246 AI 251
+
Sbjct: 93 GV 94
>At1g72680.1 68414.m08405 cinnamyl-alcohol dehydrogenase, putative
similar to cinnamyl-alcohol dehydrogenase GB:AAC35846
[Medicago sativa], SP|Q08350 [Picea abies]
Length = 355
Score = 49.2 bits (112), Expect = 2e-06
Identities = 23/65 (35%), Positives = 38/65 (58%)
Frame = +3
Query: 57 ISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVG 236
++ D+V L + G+C +DV W + Q G + P++ GHE +G+V K+G V+ VG
Sbjct: 33 VTTDDVSLTITHCGVCYADV-IWSRNQHGDS--KYPLVPGHEIAGIVTKVGPNVQRFKVG 89
Query: 237 DRVAI 251
D V +
Sbjct: 90 DHVGV 94
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = +2
Query: 266 CRYCEFCKTGRYHLCPDMIFCATPPVH-GNLVR--YYKHAA---DFCFKLPDHVTMEEGA 427
CR CE+C G+ C +F H G++ + Y H +C+K+P +E A
Sbjct: 101 CRECEYCNEGQEVNCAKGVFTFNGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAA 160
Query: 428 LLEPLAVGIHA 460
L + ++A
Sbjct: 161 PLLCAGITVYA 171
>At4g37970.1 68417.m05366 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 363
Score = 48.8 bits (111), Expect = 3e-06
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Frame = +3
Query: 63 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 242
E+EV +++ GIC SD+H K + + P++ GHE G V++IG+KV +GD+
Sbjct: 38 EEEVRVKVLYCGICHSDLHCL-KNEWHSSIY--PLVPGHEIIGEVSEIGNKVSKFNLGDK 94
Query: 243 V---AIEPACRVGTASSVRQDDTTY 308
V I +CR T S R+D Y
Sbjct: 95 VGVGCIVDSCR--TCESCREDQENY 117
>At5g42250.1 68418.m05143 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 390
Score = 47.6 bits (108), Expect = 7e-06
Identities = 26/59 (44%), Positives = 33/59 (55%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 245
EV +R+ C +C SDV +W K Q P I+GHEA GVV +G VK + GD V
Sbjct: 45 EVRIRIICTALCHSDVTFW-KLQVPPACF--PRILGHEAIGVVESVGENVKEVVEGDTV 100
>At1g77120.1 68414.m08982 alcohol dehydrogenase (ADH) identical to
alcohol dehydrogenase GI:469467 from (Arabidopsis
thaliana)
Length = 379
Score = 47.6 bits (108), Expect = 7e-06
Identities = 28/78 (35%), Positives = 43/78 (55%), Gaps = 1/78 (1%)
Frame = +3
Query: 15 KPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMGHEASG 191
KP + V+ P+ + EV +++ +C +DV++W+ KGQ F P I GHEA G
Sbjct: 20 KPLVIEEVEVAPPQ--KHEVRIKILFTSLCHTDVYFWEAKGQTPLF----PRIFGHEAGG 73
Query: 192 VVAKIGSKVKNLTVGDRV 245
+V +G V +L GD V
Sbjct: 74 IVESVGEGVTDLQPGDHV 91
>At1g22440.1 68414.m02805 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 386
Score = 46.8 bits (106), Expect = 1e-05
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 4/69 (5%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQ--KGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 242
EV +++ C +C +DV +W+ G F P I+GHEA GVV IG KV GD
Sbjct: 40 EVRIKILCTSLCHTDVTFWKLDSGPLARF----PRILGHEAVGVVESIGEKVDGFKQGDV 95
Query: 243 V--AIEPAC 263
V P C
Sbjct: 96 VLPVFHPQC 104
>At4g37990.1 68417.m05368 mannitol dehydrogenase, putative (ELI3-2)
identical to GI:16269
Length = 359
Score = 45.2 bits (102), Expect = 4e-05
Identities = 26/77 (33%), Positives = 41/77 (53%)
Frame = +3
Query: 54 EISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTV 233
E E +V ++ GIC SD+H K + G + P++ GHE GVV ++G+KV
Sbjct: 30 ETGEKDVRFKVLFCGICHSDLHM-VKNEWG--MSTYPLVPGHEIVGVVTEVGAKVTKFKT 86
Query: 234 GDRVAIEPACRVGTASS 284
G++V + C V + S
Sbjct: 87 GEKVGV--GCLVSSCGS 101
>At3g15090.1 68416.m01908 oxidoreductase, zinc-binding dehydrogenase
family protein low similarity to NOGO-interacting
mitochondrial protein from Mus musculus [gi:14522884];
contains Pfam profile: PF00107 zinc-binding
dehydrogenases
Length = 366
Score = 44.0 bits (99), Expect = 9e-05
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Frame = +3
Query: 45 PIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKN 224
P+P ++ +EVL++ V + D F P+I+G + SG VA IG+ VK+
Sbjct: 53 PVPNLNPNEVLVKAKAVSVNPLDCRIRAGYGRSVFQPHLPIIVGRDVSGEVAAIGTSVKS 112
Query: 225 LTVGDRV--AIEPACRVGT 275
L VG V A+ P GT
Sbjct: 113 LKVGQEVFGALHPTALRGT 131
>At1g23740.1 68414.m02996 oxidoreductase, zinc-binding dehydrogenase
family protein contains Pfam profile PF00107:
oxidoreductase, zinc-binding dehydrogenase family
Length = 386
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +3
Query: 48 IPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNL 227
+PEI ED+VL+++ + D Q G+ P + G++ +GVV K+GS VK+L
Sbjct: 100 VPEIKEDQVLIKVVAAALNPVDAKRRQ-GKFKATDSPLPTVPGYDVAGVVVKVGSAVKDL 158
Query: 228 TVGDRV 245
GD V
Sbjct: 159 KEGDEV 164
>At5g43940.1 68418.m05376 alcohol dehydrogenase class III /
glutathione-dependent formaldehyde dehydrogenase /
GSH-FDH (ADHIII) identical to gi:1143388
Length = 379
Score = 42.7 bits (96), Expect = 2e-04
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Frame = +3
Query: 3 ALLYKPNDLRLVQ-TPIPEISEDEVLLRMDCVGICGSDVHYWQ-KGQCGHFVLEEPMIMG 176
A+ Y+PN +++ + EV +++ +C +D + W K G F P I+G
Sbjct: 13 AVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLF----PCILG 68
Query: 177 HEASGVVAKIGSKVKNLTVGDRV 245
HEA+G+V +G V + GD V
Sbjct: 69 HEAAGIVESVGEGVTEVQAGDHV 91
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = +2
Query: 266 CRYCEFCKTGRYHLC 310
CR C+FCK+G+ +LC
Sbjct: 99 CRECKFCKSGKTNLC 113
>At4g37980.1 68417.m05367 mannitol dehydrogenase, putative (ELI3-1)
identical to GI:16267
Length = 357
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 63 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 242
E +V ++ GIC +D+ K + G + P++ GHE GVV ++G+KVK GD+
Sbjct: 33 EKDVRFKVLFCGICHTDLSM-AKNEWG--LTTYPLVPGHEIVGVVTEVGAKVKKFNAGDK 89
Query: 243 VAI 251
V +
Sbjct: 90 VGV 92
Score = 36.3 bits (80), Expect = 0.018
Identities = 22/78 (28%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Frame = +2
Query: 245 GHRAGVPCRYCEFCKTGRYHLCPDMIFCA------TPPVHGNLVRYYKHAADFCFKLPDH 406
G+ AG CR C+ C G + CP MI + HG + A DF ++PD+
Sbjct: 93 GYMAG-SCRSCDSCNDGDENYCPKMILTSGAKNFDDTMTHGGYSDHMVCAEDFIIRIPDN 151
Query: 407 VTMEEGALLEPLAVGIHA 460
+ ++ A L V +++
Sbjct: 152 LPLDGAAPLLCAGVTVYS 169
>At1g64710.1 68414.m07337 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GI:551257 from [Nicotiana tabacum]
Length = 396
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 245
EV +R+ IC +D+ W KG+ P I+GHEA+G+V +G V+ + GD V
Sbjct: 52 EVRIRILFTSICHTDLSAW-KGE-NEAQRAYPRILGHEAAGIVESVGEGVEEMMAGDHV 108
>At1g22430.1 68414.m02804 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 388
Score = 42.3 bits (95), Expect = 3e-04
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQK--GQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 242
EV +++ C +C +D+ +W+ G F P I+GHEA GVV IG V GD
Sbjct: 42 EVRIKILCTSLCHTDLTFWKLSFGPISRF----PRILGHEAVGVVESIGENVDGFKQGDV 97
Query: 243 V--AIEPAC 263
V P C
Sbjct: 98 VLPVFHPYC 106
>At4g13010.1 68417.m02030 oxidoreductase, zinc-binding dehydrogenase
family protein low similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430];
contains Pfam profile PF00107: oxidoreductase,
zinc-binding dehydrogenase family
Length = 329
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 1/74 (1%)
Frame = +3
Query: 27 LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEE-PMIMGHEASGVVAK 203
L VQ P+P +EV L+++ + D QKG F+ + P I + +G V +
Sbjct: 21 LEHVQVPVPTPKSNEVCLKLEATSLNPVDWKI-QKGMIRPFLPRKFPCIPATDVAGEVVE 79
Query: 204 IGSKVKNLTVGDRV 245
+GS VKN GD+V
Sbjct: 80 VGSGVKNFKAGDKV 93
>At2g21890.1 68415.m02601 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 375
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 54 EISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTV 233
E E++V +++ G+C SD+H K G P+I GHE G+ K+G V
Sbjct: 28 ENGENDVTVKILFCGVCHSDLHTI-KNHWGFS--RYPIIPGHEIVGIATKVGKNVTKFKE 84
Query: 234 GDRVAI 251
GDRV +
Sbjct: 85 GDRVGV 90
>At2g21730.1 68415.m02585 mannitol dehydrogenase, putative similar
to ELI3-2 (SP|Q02972), sinapyl alcohol dehydrogenase
(Populus tremuloides) (gi:14279694); contains Pfam
zinc-binding dehydrogenase domain PF00107
Length = 376
Score = 41.5 bits (93), Expect = 5e-04
Identities = 23/66 (34%), Positives = 34/66 (51%)
Frame = +3
Query: 54 EISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTV 233
E E++V +++ G+C SD+H K G P+I GHE G+ K+G V
Sbjct: 28 ENGENDVTVKILFCGVCHSDLHTI-KNHWGFS--RYPIIPGHEIVGIATKVGKNVTKFKE 84
Query: 234 GDRVAI 251
GDRV +
Sbjct: 85 GDRVGV 90
>At5g24760.2 68418.m02922 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 352
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 245
E+ +++ C +C SD+ W+ P I GHEA+G+V IG V GD V
Sbjct: 13 EIRIKVVCTSLCRSDLSAWESQSL------LPRIFGHEAAGIVESIGEGVTEFEKGDHV 65
>At5g24760.1 68418.m02923 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase from Solanum tuberosum
[SP|p14673]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 381
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 245
E+ +++ C +C SD+ W+ P I GHEA+G+V IG V GD V
Sbjct: 42 EIRIKVVCTSLCRSDLSAWESQSL------LPRIFGHEAAGIVESIGEGVTEFEKGDHV 94
>At4g39330.1 68417.m05568 mannitol dehydrogenase, putative nearly
identical to SP|P42734, probable mannitol dehydrogenase
Length = 360
Score = 40.3 bits (90), Expect = 0.001
Identities = 20/63 (31%), Positives = 34/63 (53%)
Frame = +3
Query: 63 EDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDR 242
E++V +++ G+C +D+H K G+ P++ GHE G+ K+G V GDR
Sbjct: 37 ENDVTVKILFCGVCHTDLHTI-KNDWGYSYY--PVVPGHEIVGIATKVGKNVTKFKEGDR 93
Query: 243 VAI 251
V +
Sbjct: 94 VGV 96
>At5g63620.2 68418.m07988 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 ALLYKPND-LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGH 179
A+ +PN L + + IP +E+L++ G+C SD+H + G P ++GH
Sbjct: 59 AVYREPNKPLTIEEFHIPRPKSNEILIKTKACGVCHSDLHVMK----GEIPFASPCVIGH 114
Query: 180 EASGVVAKIG 209
E +G V + G
Sbjct: 115 EITGEVVEHG 124
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 541 AKAFGAHKVLIIDILQSRLDFAKSLGADYTLLIGKD 648
A+AFGA ++ +D+ +L AK+LGA + + K+
Sbjct: 265 ARAFGASDIIAVDVQDDKLQKAKTLGATHIVNAAKE 300
>At5g63620.1 68418.m07987 oxidoreductase, zinc-binding dehydrogenase
family protein contains PFAM zinc-binding dehydrogenase
domain PF00107
Length = 427
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 3 ALLYKPND-LRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGH 179
A+ +PN L + + IP +E+L++ G+C SD+H + G P ++GH
Sbjct: 59 AVYREPNKPLTIEEFHIPRPKSNEILIKTKACGVCHSDLHVMK----GEIPFASPCVIGH 114
Query: 180 EASGVVAKIG 209
E +G V + G
Sbjct: 115 EITGEVVEHG 124
Score = 31.9 bits (69), Expect = 0.40
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 541 AKAFGAHKVLIIDILQSRLDFAKSLGADYTLLIGKD 648
A+AFGA ++ +D+ +L AK+LGA + + K+
Sbjct: 265 ARAFGASDIIAVDVQDDKLQKAKTLGATHIVNAAKE 300
>At4g22110.2 68417.m03197 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 389
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV- 245
EV +++ C +C +DV + K G P I+GHEA GV+ IG V GD V
Sbjct: 43 EVRIKIICTSLCHTDVSF-SKIDSGPLA-RFPRILGHEAVGVIESIGEHVNGFQQGDVVL 100
Query: 246 -AIEPAC 263
P C
Sbjct: 101 PVFHPHC 107
>At4g22110.1 68417.m03196 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase ADH GI:7705214 from [Lycopersicon
esculentum]; contains Pfam zinc-binding dehydrogenase
domain PF00107
Length = 389
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV- 245
EV +++ C +C +DV + K G P I+GHEA GV+ IG V GD V
Sbjct: 43 EVRIKIICTSLCHTDVSF-SKIDSGPLA-RFPRILGHEAVGVIESIGEHVNGFQQGDVVL 100
Query: 246 -AIEPAC 263
P C
Sbjct: 101 PVFHPHC 107
>At1g32780.1 68414.m04041 alcohol dehydrogenase, putative similar to
alcohol dehydrogenase GB:CAA37333 GI:297178 from
[Solanum tuberosum]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 394
Score = 35.9 bits (79), Expect = 0.024
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 69 EVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVVAKIGSKVKNLTVGDRV 245
EV +++ IC +D+ W P I+GHEA G+V +G VK++ GD V
Sbjct: 37 EVRVKILYSSICHTDLGCWNGTNEAERAF--PRILGHEAVGIVESVGEGVKDVKEGDYV 93
>At4g21580.1 68417.m03122 oxidoreductase, zinc-binding dehydrogenase
family protein Pig3 Homo sapiens, PID:G2754812; contains
Pfam zinc-binding dehydrogenase domain PF00107
Length = 325
Score = 34.7 bits (76), Expect = 0.056
Identities = 24/77 (31%), Positives = 36/77 (46%)
Frame = +3
Query: 15 KPNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGV 194
KP L+L PE+ +DEVL+R+ + +D + G P +G E SG
Sbjct: 11 KPEVLQLRDVADPEVKDDEVLIRVLATALNRADT-LQRLGLYNPPPGSSP-YLGLECSGT 68
Query: 195 VAKIGSKVKNLTVGDRV 245
+ +G V VGD+V
Sbjct: 69 IESVGKGVSRWKVGDQV 85
>At3g45770.1 68416.m04948 oxidoreductase, zinc-binding dehydrogenase
family protein similar to nuclear receptor binding
factor-1 NRBF-1 - Rattus norvegicus, EMBL:AB015724;
contains Pfam zinc-binding dehydrogenase domain PF00107
Length = 375
Score = 34.7 bits (76), Expect = 0.056
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +3
Query: 30 RLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPM--IMGHEASGVVAK 203
RLV P E+ E++V ++M I SD++ + G + + P+ + G+E G V
Sbjct: 61 RLVNLPPVEVKENDVCVKMIAAPINPSDINRIE----GVYPVRPPVPAVGGYEGVGEVYA 116
Query: 204 IGSKVKNLTVGDRVAIEP 257
+GS V + GD V P
Sbjct: 117 VGSNVNGFSPGDWVIPSP 134
>At5g61510.1 68418.m07718 NADP-dependent oxidoreductase, putative
similar to zeta-crystallin homolog TED2 from Zinnia
elegans [gi:531096]; contains Pfam zinc-binding
dehydrogenase domain PF00107
Length = 406
Score = 32.3 bits (70), Expect = 0.30
Identities = 23/77 (29%), Positives = 36/77 (46%)
Frame = +3
Query: 18 PNDLRLVQTPIPEISEDEVLLRMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASGVV 197
P L+ + E E E+ ++ +G+ DV Y++KG + P G EA G V
Sbjct: 95 PEVLKWEDVEVGEPKEGEIRVKNKAIGLNFIDV-YFRKGV--YKPASMPFTPGMEAVGEV 151
Query: 198 AKIGSKVKNLTVGDRVA 248
+GS + +GD VA
Sbjct: 152 VAVGSGLTGRMIGDLVA 168
>At1g65020.1 68414.m07369 expressed protein
Length = 319
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -1
Query: 523 GRWVPSQYQHHVSRRDSAPLARVNAHREGLQ*RSFFHGHVIRKLEAKISCVLVI 362
G WV +HH + PLA V L+ S+ + LE +SC +VI
Sbjct: 95 GSWVCEGGKHHTTETFPDPLAEVKKQASVLE--SYLEQRGVTLLEGNVSCKVVI 146
>At3g56460.1 68416.m06279 oxidoreductase, zinc-binding dehydrogenase
family protein low similarity to probable NADP-dependent
oxidoreductase (zeta-crystallin homolog) P1
[SP|Q39172][gi:886428] and P2 [SP|Q39173][gi:886430],
zeta-crystallin / quinone reductase (NADPH) - Mus
musculus, PIR:A54932; contains Pfam profile PF00107:
oxidoreductase, zinc-binding dehydrogenase family
Length = 348
Score = 29.5 bits (63), Expect = 2.1
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = +3
Query: 162 PMIMGHEASGVVAKIGSKVKNLTVGDRV 245
P I G + SG+V IG V VGDRV
Sbjct: 69 PFIPGSDYSGIVDAIGPAVTKFRVGDRV 96
>At5g47600.1 68418.m05875 heat shock protein-related contains weak
similarity to Heat shock 22 kDa protein, mitochondrial
precursor (Swiss-Prot:P46254) [Pisum sativum]
Length = 131
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +3
Query: 81 RMDCVGICGSDVHYWQKGQCGHFVLEEPMIMGHEASG 191
R+D G SD+ YW HF +EP + +E +G
Sbjct: 44 RVDMPGCPESDLTYWVDANNVHFFADEPAMPEYENAG 80
>At1g50740.1 68414.m05706 expressed protein contains Pfam profile
PF03647: Uncharacterised protein family (UPF0136)
Length = 119
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 380 DFCFKLPDHVTMEEGALLEPLAVGIHACKRGGVSAGHVVLVLG 508
DFCF +P + + G + L G A GG G +V++ G
Sbjct: 3 DFCFTIPYGILLIVGGFIGYLKKGSIASLAGGAGTGLLVVLAG 45
>At1g13200.1 68414.m01531 F-box family protein contains F-box domain
Pfam:PF00646; contains TIGRFAM TIGR01640: F-box protein
interaction domain
Length = 435
Score = 28.3 bits (60), Expect = 4.9
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = -3
Query: 239 ITNCQILDFRTDLGHYS*SFVSHDHWFFQHEVSA 138
+T C+I DFR + Y SH +++Q SA
Sbjct: 237 VTKCEIFDFRKNAWRYLACTPSHQIFYYQKPASA 270
>At5g15600.1 68418.m01825 expressed protein
Length = 127
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +3
Query: 96 GICGSDVHYWQK-GQ-CGHFVLEEPMIMGHEASGVVAKIG 209
G+ GS +Y++ GQ CG+F+ E P H A G + +G
Sbjct: 76 GVRGSPNNYYRSDGQNCGNFLTERPSTKVHAAPGGGSSLG 115
>At1g69280.1 68414.m07943 expressed protein
Length = 400
Score = 27.9 bits (59), Expect = 6.5
Identities = 15/50 (30%), Positives = 19/50 (38%)
Frame = +1
Query: 7 CCTNQMICVWYKHRSLKYLKMRSCCAWTAWVSAGQTSTTGRRVNADTSCW 156
CC ++ Y K LK C +W W S S+ G SCW
Sbjct: 314 CC--RLPSCGYNFFCCKRLKCCPCFSWCRWPSCDYNSSCGWLFCCHWSCW 361
>At1g53190.1 68414.m06028 zinc finger (C3HC4-type RING finger)
family protein similar to RING-H2 finger protein RHG1a
GI:3822225 from [Arabidopsis thaliana]; contains Pfam
profile PF00097: Zinc finger, C3HC4 type (RING finger)
Length = 494
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/23 (52%), Positives = 15/23 (65%)
Frame = -1
Query: 502 YQHHVSRRDSAPLARVNAHREGL 434
YQHH R DS P+A + HR G+
Sbjct: 325 YQHH-QRDDSVPVATLRQHRGGV 346
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,713,328
Number of Sequences: 28952
Number of extensions: 339399
Number of successful extensions: 940
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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