Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0106
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069164-1|AAL39309.1|  545|Drosophila melanogaster GH19483p pro...    30   2.4  
AE014298-2972|AAF45368.1|  545|Drosophila melanogaster CG9581-PA...    30   2.4  
AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p pro...    29   5.4  
AY075310-1|AAO39630.1|  145|Drosophila melanogaster AT31918p pro...    28   9.5  
AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA...    28   9.5  

>AY069164-1|AAL39309.1|  545|Drosophila melanogaster GH19483p
           protein.
          Length = 545

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +2

Query: 401 CSISGRSFRAIVAE-KPLLSLFHYLLGWAERCAVDNIAGARCFVPSVQSGDVAETLVAV* 577
           C I+ RSF  ++AE +P  S  H       +C + N A    + P V +G  A  +  V 
Sbjct: 281 CDIASRSFNEVMAETRPGQSEHHLFAAIDYKCRMRN-ASYLAYPPVVAAGKNATVIHYVA 339

Query: 578 NSRVIRFED 604
           NS+++  +D
Sbjct: 340 NSQLLGQQD 348


>AE014298-2972|AAF45368.1|  545|Drosophila melanogaster CG9581-PA
           protein.
          Length = 545

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
 Frame = +2

Query: 401 CSISGRSFRAIVAE-KPLLSLFHYLLGWAERCAVDNIAGARCFVPSVQSGDVAETLVAV* 577
           C I+ RSF  ++AE +P  S  H       +C + N A    + P V +G  A  +  V 
Sbjct: 281 CDIASRSFNEVMAETRPGQSEHHLFAAIDYKCRMRN-ASYLAYPPVVAAGKNATVIHYVA 339

Query: 578 NSRVIRFED 604
           NS+++  +D
Sbjct: 340 NSQLLGQQD 348


>AY061451-1|AAL28999.1|  249|Drosophila melanogaster LD38807p
           protein.
          Length = 249

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 3/44 (6%)
 Frame = -2

Query: 431 SRETISHLCYTSHVSL---QCQTRVKLNRVFFPR*FSQARSLGC 309
           S+ TI   CY  ++S    QCQ R+   +VFF    S A    C
Sbjct: 14  SKRTIFETCYMKNISFLKTQCQARILFCKVFFAVHSSNANVPSC 57


>AY075310-1|AAO39630.1|  145|Drosophila melanogaster AT31918p
           protein.
          Length = 145

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 190 TRACLNFFTLTFRALGRNHIASTPARAIAMLCFN*TVGFPLSVPVL 53
           T AC+ + T+ F  +G  +IA+   +  A +     VGF L   VL
Sbjct: 17  TTACIFYITMCFMMIGCKYIANANPKRFAKIVHPSAVGFVLVGTVL 62


>AE014297-2568|AAF55584.1|  950|Drosophila melanogaster CG7709-PA
           protein.
          Length = 950

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = -3

Query: 418 SPTYATPLMSPYNARLESSSTGSSFPADSPKP 323
           +P++ +   S Y A  +S+S+G  +PA +P+P
Sbjct: 153 APSFNSAPSSSYAAPSQSASSGGPYPAAAPRP 184


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,324,909
Number of Sequences: 53049
Number of extensions: 625949
Number of successful extensions: 2042
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1907
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2042
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)