Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0101
         (465 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    25   1.7  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   4.0  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   6.9  
AJ297932-1|CAC35452.1|   90|Anopheles gambiae gSG1a protein prot...    23   6.9  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    22   9.2  

>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 24.6 bits (51), Expect = 1.7
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 172 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 77
           R+R  +   TP+    +++PKL+ + A  P+L
Sbjct: 5   RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 4.0
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -2

Query: 413 PLNGGRTESCRSRTKRNR 360
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 11/26 (42%), Positives = 12/26 (46%)
 Frame = -2

Query: 140 PVLRANPYSEVTDPICRLPLPTLFYR 63
           P L     S +  P CRLP P L  R
Sbjct: 89  PELVTRSLSNLELPSCRLPCPNLIPR 114


>AJ297932-1|CAC35452.1|   90|Anopheles gambiae gSG1a protein
           protein.
          Length = 90

 Score = 22.6 bits (46), Expect = 6.9
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = -2

Query: 392 ESCRSRTKRNRHDLTARKIRGRPENAGPDPVR 297
           +S  SR ++ RH+LT    R     A PD  R
Sbjct: 54  DSLLSRLEQMRHNLTGCSERETTNPAPPDDTR 85


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 22.2 bits (45), Expect = 9.2
 Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
 Frame = +3

Query: 342 PSRKVVSVSFRARSARFCTTAVQRSAQNW--HGQGESDC 452
           PS+++VS +   R    CT    R+   W  +  GE  C
Sbjct: 160 PSKRLVSQTATRRLGLCCTNCGTRTTTLWRRNNDGEPVC 198


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 521,217
Number of Sequences: 2352
Number of extensions: 10711
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 40395045
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)