Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0100
(672 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 149 2e-36
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 149 2e-36
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 149 2e-36
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 149 2e-36
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 148 3e-36
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 148 3e-36
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 144 6e-35
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 144 6e-35
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 133 1e-31
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 126 1e-29
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 116 2e-26
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 104 5e-23
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 84 9e-17
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 72 4e-13
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 61 6e-10
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 55 5e-08
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 44 7e-05
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 1e-04
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 43 2e-04
At5g43500.2 68418.m05318 expressed protein 31 0.53
At5g43500.1 68418.m05319 expressed protein 31 0.53
At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family... 28 6.5
At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family... 28 6.5
At3g24210.1 68416.m03038 ankyrin repeat family protein contains ... 27 8.6
At3g14720.1 68416.m01861 mitogen-activated protein kinase, putat... 27 8.6
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 149 bits (361), Expect = 2e-36
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GG+TM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 303 GGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKS 362
Query: 327 EYDESGPGIVHRKCF 283
EYDESGP IVHRKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
Score = 97.1 bits (231), Expect = 9e-21
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 248 QVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGN 298
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 149 bits (361), Expect = 2e-36
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 327 EYDESGPGIVHRKCF 283
EYDESGP IVHRKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
Score = 98.3 bits (234), Expect = 4e-21
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 248 QVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGN 298
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 149 bits (361), Expect = 2e-36
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 327 EYDESGPGIVHRKCF 283
EYDESGP IVHRKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
Score = 98.7 bits (235), Expect = 3e-21
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 248 QVITIGGERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGN 298
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 149 bits (361), Expect = 2e-36
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GGTTM+PGIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 327 EYDESGPGIVHRKCF 283
EYDESGP IVHRKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
Score = 98.3 bits (234), Expect = 4e-21
Identities = 42/51 (82%), Positives = 46/51 (90%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIG+ERFRCPE L+QPS +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 248 QVITIGSERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGN 298
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 148 bits (359), Expect = 3e-36
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 303 GGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKA 362
Query: 327 EYDESGPGIVHRKCF 283
EYDE+GPGIVHRKCF
Sbjct: 363 EYDEAGPGIVHRKCF 377
Score = 100 bits (239), Expect = 1e-21
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 248 QVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGN 298
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 148 bits (359), Expect = 3e-36
Identities = 66/75 (88%), Positives = 72/75 (96%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 303 GGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKA 362
Query: 327 EYDESGPGIVHRKCF 283
EYDE+GPGIVHRKCF
Sbjct: 363 EYDEAGPGIVHRKCF 377
Score = 100 bits (239), Expect = 1e-21
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 248 QVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGN 298
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 144 bits (348), Expect = 6e-35
Identities = 64/75 (85%), Positives = 70/75 (93%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 327 EYDESGPGIVHRKCF 283
EYDESGP IVHRKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
Score = 97.1 bits (231), Expect = 9e-21
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 248 QVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGN 298
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 144 bits (348), Expect = 6e-35
Identities = 64/75 (85%), Positives = 70/75 (93%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GGTTM+ GI DRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWI+K
Sbjct: 303 GGTTMFGGIGDRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKA 362
Query: 327 EYDESGPGIVHRKCF 283
EYDESGP IVHRKCF
Sbjct: 363 EYDESGPSIVHRKCF 377
Score = 97.1 bits (231), Expect = 9e-21
Identities = 43/51 (84%), Positives = 45/51 (88%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIG ERFRCPE LFQPS +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 248 QVITIGAERFRCPEVLFQPSMIGMENPGIHETTYNSIMKCDVDIRKDLYGN 298
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 133 bits (321), Expect = 1e-31
Identities = 58/75 (77%), Positives = 66/75 (88%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GGTTM+PGIADRM KEI ALAP ++KIK++APPERKYSVW+GGSILASLS+F MWI+K
Sbjct: 304 GGTTMFPGIADRMNKEINALAPPSMKIKVVAPPERKYSVWVGGSILASLSSFAPMWITKA 363
Query: 327 EYDESGPGIVHRKCF 283
EYDE G IVHRKCF
Sbjct: 364 EYDEQGGAIVHRKCF 378
Score = 94.7 bits (225), Expect = 5e-20
Identities = 42/51 (82%), Positives = 44/51 (86%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIG ERFRCPE LFQ S +GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 249 QVITIGAERFRCPEVLFQTSLIGMETSGIHETTYNSIMKCDVDIRKDLYGN 299
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 126 bits (304), Expect = 1e-29
Identities = 55/75 (73%), Positives = 66/75 (88%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GGTTM+ GI +RM KEI ALA + ++IKI+APPERKYSVWIGGSILASLST++QMWI+K
Sbjct: 255 GGTTMFRGIEERMTKEINALAAANMRIKIVAPPERKYSVWIGGSILASLSTYEQMWITKA 314
Query: 327 EYDESGPGIVHRKCF 283
EY+E+GP IVH KCF
Sbjct: 315 EYEENGPAIVHTKCF 329
Score = 92.7 bits (220), Expect = 2e-19
Identities = 41/51 (80%), Positives = 43/51 (84%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIG ERFRCPE LFQPS +GME+ GIHE YNSIMKCD DIRKDLY N
Sbjct: 200 QVITIGAERFRCPEVLFQPSLIGMETSGIHEKTYNSIMKCDDDIRKDLYGN 250
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 116 bits (278), Expect = 2e-26
Identities = 50/74 (67%), Positives = 61/74 (82%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GGTTM GI +RM KE+ AL PS++K+K++ PPE + SVWIGGSILASLSTF QMWI+K+
Sbjct: 292 GGTTMLHGIKERMTKELNALVPSSMKVKVVVPPESECSVWIGGSILASLSTFHQMWITKD 351
Query: 327 EYDESGPGIVHRKC 286
EY+E G IVHRKC
Sbjct: 352 EYEEHGAAIVHRKC 365
Score = 74.5 bits (175), Expect = 6e-14
Identities = 33/51 (64%), Positives = 37/51 (72%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
Q ITI ERF CPE LFQPS +G ES GIHE NSI+KC VD R+D+Y N
Sbjct: 237 QEITIEAERFMCPEVLFQPSVIGKESSGIHEATRNSILKCPVDTRRDMYGN 287
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 104 bits (250), Expect = 5e-23
Identities = 48/59 (81%), Positives = 55/59 (93%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK 331
GGTTM+ GIADRM KEITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQ+ I +
Sbjct: 303 GGTTMFSGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQVKIDQ 361
Score = 100 bits (239), Expect = 1e-21
Identities = 44/51 (86%), Positives = 46/51 (90%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVITIG ERFRCPE LFQPSF+GME+ GIHET YNSIMKCDVDIRKDLY N
Sbjct: 248 QVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGN 298
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 83.8 bits (198), Expect = 9e-17
Identities = 36/77 (46%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAP---PERKYSVWIGGSILASLSTFQQMWI 337
GGT+ + +R++K++ +P + ++K++A ER++SVWIGGSILASL +FQQMW
Sbjct: 364 GGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWF 423
Query: 336 SKEEYDESGPGIVHRKC 286
SK EY+E G + RKC
Sbjct: 424 SKSEYEEHGASYIQRKC 440
Score = 44.0 bits (99), Expect = 9e-05
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 12/63 (19%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFL----GMESC--------GIHETVYNSIMKCDVDIRKDL 528
Q + IG +RF+ P+ +F PS + GME G+ V SI KCDVDIR++L
Sbjct: 297 QTLEIGADRFKVPDVMFNPSIVQTIPGMEKYAEMIPSVRGLPHMVMESINKCDVDIRREL 356
Query: 527 YAN 519
Y++
Sbjct: 357 YSS 359
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 71.7 bits (168), Expect = 4e-13
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 6/81 (7%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERK------YSVWIGGSILASLSTFQQ 346
GGTT G R QKE L S I+ ++ PPE YS W+GG+ILA + Q
Sbjct: 284 GGTTSMTGFESRFQKEAN-LCSSAIRPTLVKPPEYMPENLGMYSAWVGGAILAKVVFPQN 342
Query: 345 MWISKEEYDESGPGIVHRKCF 283
++K +YDE+GP +VHRKCF
Sbjct: 343 QHVTKADYDETGPSVVHRKCF 363
Score = 44.0 bits (99), Expect = 9e-05
Identities = 23/51 (45%), Positives = 29/51 (56%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLYAN 519
QVI+IG ER+ EALFQPS LG+E GI E + I + + L N
Sbjct: 229 QVISIGRERYSVGEALFQPSILGLEEHGIVEQLVRIISTVSSENHRQLLEN 279
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 61.3 bits (142), Expect = 6e-10
Identities = 27/75 (36%), Positives = 43/75 (57%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GG+T++P + +R++ E+ L P +KI + VW GGS+LAS F+ M ++K
Sbjct: 346 GGSTLFPQLKERLEGELRPLVPDHFDVKITTQEDPILGVWRGGSLLASSPDFESMCVTKA 405
Query: 327 EYDESGPGIVHRKCF 283
EY+E G R+ F
Sbjct: 406 EYEELGSARCRRRFF 420
Score = 43.2 bits (97), Expect = 2e-04
Identities = 20/47 (42%), Positives = 27/47 (57%)
Frame = -2
Query: 665 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLY 525
I + NERF PE LFQP+ LGM G+ E + +I C ++ LY
Sbjct: 293 IDLTNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLY 339
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 54.8 bits (126), Expect = 5e-08
Identities = 29/78 (37%), Positives = 48/78 (61%), Gaps = 12/78 (15%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEI------TALAPS-----TIKIKIIAPPERKYSVWIGGSILAS- 364
GG+TMYPG+ R++KEI T L + ++++I PP RK+ V++GG++LA
Sbjct: 302 GGSTMYPGLPSRLEKEIQDRYLDTVLKGNKDGLKKLRLRIEDPPRRKHMVYLGGAVLAGI 361
Query: 363 LSTFQQMWISKEEYDESG 310
+ + WI++E+Y E G
Sbjct: 362 MKDAPEFWINREDYMEEG 379
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/49 (42%), Positives = 31/49 (63%)
Frame = -2
Query: 671 QVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVDIRKDLY 525
+VI +G ERF+ PEALF P + +E G+ + V+ I + D+D R LY
Sbjct: 247 RVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRCIQEMDIDNRMMLY 295
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/65 (30%), Positives = 41/65 (63%), Gaps = 3/65 (4%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIK--IKIIAPPERKYSVWIGGSILASLSTFQQMW-I 337
GG+ PG+++R+++E+ PS+I I++I PP + W G ++++LS F W I
Sbjct: 399 GGSACLPGLSERLERELQDHLPSSISNGIRVIPPPYGVDTSWHGAKLISNLSIFPGPWCI 458
Query: 336 SKEEY 322
+++++
Sbjct: 459 TRKQF 463
Score = 35.5 bits (78), Expect = 0.032
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -2
Query: 662 TIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCD 549
T+ ERF+ E LFQP GM + +H+ V + CD
Sbjct: 344 TLSKERFQTGEILFQPRLAGMRAMSLHQAVSLCMDHCD 381
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -2
Query: 665 ITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIMKCDVD 543
I IG ERFRCPE LF P+ +G++ G+ E SI + D
Sbjct: 589 IVIGIERFRCPEILFHPNLIGIDQVGLDEMAGTSIRRLPHD 629
Score = 37.1 bits (82), Expect = 0.011
Identities = 18/66 (27%), Positives = 31/66 (46%)
Frame = -1
Query: 507 GGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE 328
GG ++ PG+ +R++ I + P I ++ + W G S A+ F +K
Sbjct: 645 GGCSLLPGMNERLECGIRMIRPCGSPINVVRAMDPVLDAWRGASAFAANLNFLGNAFTKM 704
Query: 327 EYDESG 310
+YDE G
Sbjct: 705 DYDEKG 710
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = -1
Query: 435 IKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKEEYDESGPGI 301
+++ +++ P ++++VW GGS+L+S F +KEEY+E G I
Sbjct: 372 VEVNVVSHPVQRFAVWFGGSVLSSTPEFFASCRTKEEYEEYGASI 416
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -2
Query: 659 IGNERFRCPEALFQPSFLGME-SCGIHETVYNSIMKCDVDIRKDLYAN 519
+G ERF PE F P + + + + I +D R+ LY N
Sbjct: 280 VGYERFLGPEVFFNPEIYSNDFTTTLPAVIDKCIQSAPIDTRRALYKN 327
>At5g43500.2 68418.m05318 expressed protein
Length = 584
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = -1
Query: 510 VGGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIGGSILASLSTFQQM 343
+GG + G+ +++ + P T I + + E ++ W GG+IL L ++
Sbjct: 489 IGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGREA 548
Query: 342 WISKEEYDESG 310
WI + ++ +G
Sbjct: 549 WIERHQWMVNG 559
>At5g43500.1 68418.m05319 expressed protein
Length = 596
Score = 31.5 bits (68), Expect = 0.53
Identities = 16/71 (22%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Frame = -1
Query: 510 VGGTTMYPGIADRMQKEITALAPSTIKIKII----APPERKYSVWIGGSILASLSTFQQM 343
+GG + G+ +++ + P T I + + E ++ W GG+IL L ++
Sbjct: 501 IGGAGLTKGLVAAVEERVLHAIPPTEAIDTVQVLPSRTEPQFVTWKGGAILGILDFGREA 560
Query: 342 WISKEEYDESG 310
WI + ++ +G
Sbjct: 561 WIERHQWMVNG 571
>At3g20270.2 68416.m02568 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 515
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 519 HRHVGGTTMYPGIADRMQKEITALAPSTIKIKII 418
H + G + +Y G+ D QK I + T+ KI+
Sbjct: 208 HINGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 241
>At3g20270.1 68416.m02567 lipid-binding serum glycoprotein family
protein similar to SP|P17213 Bactericidal
permeability-increasing protein precursor (BPI) {Homo
sapiens}; contains Pfam profile PF02886: LBP / BPI /
CETP family, C-terminal domain
Length = 722
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -1
Query: 519 HRHVGGTTMYPGIADRMQKEITALAPSTIKIKII 418
H + G + +Y G+ D QK I + T+ KI+
Sbjct: 415 HINGGASWLYQGVVDAFQKMIISTVEKTVSTKIV 448
>At3g24210.1 68416.m03038 ankyrin repeat family protein contains
ankyrin repeats, Pfam domain PF00023
Length = 607
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -3
Query: 472 DAEGDHRPRALDHQDQDHRSPREEVLRMDRWIHPGFPV 359
D E +P+AL H S ++ LR W+ P FP+
Sbjct: 423 DNEHYRKPKALVSDKTRHESEYKKGLRPVLWLSPNFPL 460
>At3g14720.1 68416.m01861 mitogen-activated protein kinase, putative
/ MAPK, putative (MPK19) identical to mitogen-activated
protein kinase (MAPK)(AtMPK19), PMID:12119167;
Length = 586
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = -1
Query: 576 RVQLHHEVRRRHP*GPVRQHRHVGGTTMYPGIADRMQKEITALAPSTIKIKIIAPPERKY 397
R ++ E+ HP G + +YP ++K+ L ++ K + PP+RK+
Sbjct: 337 RELIYREILEYHPQLLKDYMNSEGSSFLYPSAIGHLRKQFAYLEENSGKSGPVIPPDRKH 396
Query: 396 S 394
+
Sbjct: 397 A 397
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,741,710
Number of Sequences: 28952
Number of extensions: 248865
Number of successful extensions: 769
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 763
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1422784080
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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