Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0098
(633 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254 32 0.44
01_06_0456 + 29521282-29522064 32 0.44
06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,890... 31 0.76
03_04_0006 + 16257288-16259522 30 1.8
09_02_0221 + 5962606-5963197,5963711-5963837,5963994-5964100,596... 29 2.3
05_03_0582 - 15738503-15739301,15739385-15739642,15740585-157406... 29 3.1
12_01_0843 + 7891622-7892524 29 4.1
06_03_1448 + 30235336-30236763 29 4.1
06_03_1443 + 30182018-30183445 29 4.1
06_03_1440 + 30166515-30167942 29 4.1
06_03_1437 + 30151030-30152457 29 4.1
06_03_1429 + 30100834-30102261 29 4.1
06_03_1425 + 30084383-30085810 29 4.1
06_03_1420 - 30053713-30055140 29 4.1
06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764 29 4.1
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 29 4.1
03_02_0740 - 10836752-10837052,10837756-10837814,10837901-108384... 28 5.4
12_02_0077 - 13288916-13289659,13289689-13289691 28 7.1
12_01_0831 - 7688342-7688772,7690678-7692610,7693142-7693915,769... 28 7.1
08_02_1371 + 26493981-26494471,26497374-26497504,26497947-26498692 28 7.1
06_01_0437 + 3101449-3101521,3101872-3102232,3103766-3103958,310... 28 7.1
04_01_0416 - 5504415-5504590,5509032-5509116,5509190-5509322,550... 28 7.1
02_05_0726 - 31252210-31253166,31253667-31253840,31254320-312543... 28 7.1
02_04_0193 - 20801959-20802583,20803372-20803448,20803530-208036... 28 7.1
08_02_0203 - 14231134-14231907 27 9.4
06_03_0507 + 21603472-21603750,21604371-21604463,21605046-216053... 27 9.4
01_06_1759 + 39689410-39689573,39689728-39689923,39690014-396901... 27 9.4
>09_06_0186 + 21427739-21428813,21428894-21428977,21429136-21429254
Length = 425
Score = 31.9 bits (69), Expect = 0.44
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Frame = +2
Query: 62 PRLAVSSNRITREF*TATSVSATSPLCTLGTKHRA-----PADIIDRAPLPPNRVSNETM 226
P + V++N R + TSV S L A P +++ P+P N ++
Sbjct: 155 PSIIVTANPPPRNVVSTTSVPQNSIAAKLACSSVAAASPPPRNLVSTTPVPRNSITANLA 214
Query: 227 KVVVFQRRSPKRSPTYATPLMSPYNARLESSSTGSSFPADSPKP 358
V P R+ TP+ P+N+ + ++ SS A SP P
Sbjct: 215 SSSVAAASPPPRNLVSTTPV--PHNS-IAANLASSSVAAASPPP 255
Score = 31.1 bits (67), Expect = 0.76
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 1/97 (1%)
Frame = +2
Query: 53 SQTPRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADIIDRAPLPPNRVSNETMKV 232
S PR VS+ + R TA S++ + P +++ P+P N ++
Sbjct: 192 SPPPRNLVSTTPVPRNSITANLASSS-----VAAASPPPRNLVSTTPVPHNSIAANLASS 246
Query: 233 VVFQRRSPKRSPTYATPL-MSPYNARLESSSTGSSFP 340
V P R+ TP+ +P A + SSS ++ P
Sbjct: 247 SVAAASPPPRNLVSTTPVPRNPIAANVASSSVAAASP 283
>01_06_0456 + 29521282-29522064
Length = 260
Score = 31.9 bits (69), Expect = 0.44
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 6/47 (12%)
Frame = +3
Query: 66 AWQC--PRTGSRGSFKRRRAFPPRHHSARLER----NTVRPPILSTA 188
AW+C P +G+RG +RRR P S R R +T+RP + S A
Sbjct: 12 AWRCYSPASGARGGSRRRRRRPAGTTSRRCSRADRLDTLRPYVTSAA 58
>06_01_1087 + 8901950-8902102,8902960-8903996,8904438-8904586,
8905437-8905690,8905785-8908799,8908889-8909001,
8909975-8910164,8910399-8910512,8910591-8910698,
8910941-8911073,8911206-8911408,8911626-8911826
Length = 1889
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 461 GSQMPRHLISDAHEWINEIPTVPIYYLAKPQPRERAWENQRGKKTLLSL 315
G+ PR + D EW N PT+ ++ + +PRE Q+ K + L
Sbjct: 1393 GNCAPRTVECDEGEWYNNFPTIDENHVQRNKPREEQIFQQKLKPAIFIL 1441
>03_04_0006 + 16257288-16259522
Length = 744
Score = 29.9 bits (64), Expect = 1.8
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +2
Query: 236 VFQRRSPKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWE 406
V RRSP + Y T L + ARL T PA SP +AV S + G W+
Sbjct: 160 VAARRSPW-TVVYGTNLRTGETARLTPRGTFDLSPAVSPSGKRVAVASWQGKPGLWD 215
>09_02_0221 +
5962606-5963197,5963711-5963837,5963994-5964100,
5964185-5964328,5964700-5964822,5964921-5965103,
5965540-5965718,5965797-5965823
Length = 493
Score = 29.5 bits (63), Expect = 2.3
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 242 QRRSPKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR*GQWESR 412
QR S ++ Y TP + Y A SSS GSS P P+A++ + E R
Sbjct: 290 QRSSFEQKTNYQTPASALYGAYEGSSSQGSSSGYGEPPKDPVALMEFYMKKAAQEER 346
>05_03_0582 -
15738503-15739301,15739385-15739642,15740585-15740670,
15740879-15740960,15741044-15741213,15742081-15742194,
15742984-15743082,15743171-15743249,15744604-15744710
Length = 597
Score = 29.1 bits (62), Expect = 3.1
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = +2
Query: 197 PPNRVSNETMKVVVFQRRSPKRSPTYATPLMSPYNARLESSSTGSSFPADSPKP 358
PP S +T + F S K PT A+P+ P N R S P S P
Sbjct: 487 PPPWASEDTAESNPFIAASLKNQPTSASPVNVPLNLRPLQQSNSFGVPLRSAGP 540
>12_01_0843 + 7891622-7892524
Length = 300
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +2
Query: 188 APLPPNRVSNETMKVVVFQRRSPKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPL 367
AP P V+ +T+ VV + +R L SP SSS+G + SP P P
Sbjct: 66 APAPAPSVAGKTVPKVVGDCKEMEREKEKEKSLSSP-----SSSSSGMTSVESSPPPPPS 120
Query: 368 AVVSL 382
A++ L
Sbjct: 121 AMLPL 125
>06_03_1448 + 30235336-30236763
Length = 475
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 61 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 198
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1443 + 30182018-30183445
Length = 475
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 61 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 198
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1440 + 30166515-30167942
Length = 475
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 61 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 198
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1437 + 30151030-30152457
Length = 475
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 61 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 198
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1429 + 30100834-30102261
Length = 475
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 61 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 198
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1425 + 30084383-30085810
Length = 475
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 61 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 198
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_03_1420 - 30053713-30055140
Length = 475
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = +1
Query: 61 SPPGSVLEPDHAGVLN-GDERFRHVTTLHAWNETPCARRYYRPRTAS 198
+PP L +L+ GD+R+ V LH W+E R YR +S
Sbjct: 126 NPPPPTLGDHQLAILSCGDDRYV-VAALHVWSEFTSTLRLYRSSCSS 171
>06_01_0328 + 2379610-2380359,2380479-2381108,2381222-2381764
Length = 640
Score = 28.7 bits (61), Expect = 4.1
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +1
Query: 133 TTLHAWNETPCARRYY 180
TT AW ETPCA R++
Sbjct: 560 TTTEAWVETPCAHRFH 575
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -2
Query: 125 RKRSSPFKTPA*SGSRTLPGGEFDWGGTSV 36
+KR P K PA S S+ LPG + + G SV
Sbjct: 339 KKRGRPRKYPAPSNSKHLPGTDTELGNDSV 368
>03_02_0740 -
10836752-10837052,10837756-10837814,10837901-10838476,
10839965-10841686,10841776-10842173,10842264-10842318,
10842989-10843048,10843444-10843540,10844885-10844955,
10845029-10845109,10846054-10846124,10847951-10848119,
10848521-10848683,10848752-10848942,10849037-10849168
Length = 1381
Score = 28.3 bits (60), Expect = 5.4
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 46 PPQSNSPPGSVLEPDHAGVLNGDE 117
P +NS P +V +PD +LNGDE
Sbjct: 739 PTSNNSVPQNVDQPDSKKMLNGDE 762
>12_02_0077 - 13288916-13289659,13289689-13289691
Length = 248
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 311 ESSSTGSSFPADSPKPVPLAVVSLDSR 391
++ S G S P DS + VP+ VV+L R
Sbjct: 3 DNQSLGKSLPKDSRRHVPVGVVALKKR 29
>12_01_0831 -
7688342-7688772,7690678-7692610,7693142-7693915,
7694019-7694142,7696084-7696189,7696346-7696532
Length = 1184
Score = 27.9 bits (59), Expect = 7.1
Identities = 23/76 (30%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Frame = +2
Query: 191 PLPPNRVSNE-TMKVVVFQRRSPKRSPTYATPLMSPYNA--RLESSSTGSSFPADSPKPV 361
P P R S + K + RRSP + T P SP A R+ + ST + P PV
Sbjct: 184 PTPSWRPSTPPSAKTLTPPRRSPSPASTLTPPRRSPSPASRRMSTGSTPALNRTRGPSPV 243
Query: 362 PLAVVSLDSR*GQWES 409
+S + W S
Sbjct: 244 KTNRISSSPKLQGWHS 259
>08_02_1371 + 26493981-26494471,26497374-26497504,26497947-26498692
Length = 455
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = -3
Query: 202 GRKRCAVD-NIGGRTVFRSKRAEW*RGGNARRRLKLPRDPVRGHCQAGSLTGAVHLSKNN 26
GR+ C+VD +GG F GG A+ R+ + +P +G A + TGA + ++
Sbjct: 48 GRQECSVDLKLGGLGEFG--------GGGAQPRVAVAGEPAKGKGPAAAATGAA-AAASS 98
Query: 25 AGVLRP 8
A RP
Sbjct: 99 APAKRP 104
>06_01_0437 +
3101449-3101521,3101872-3102232,3103766-3103958,
3104051-3104848,3104997-3105143,3106024-3106377
Length = 641
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)
Frame = -3
Query: 169 GRTVFRSKR--AEW*RGGNARRRLKLPRDPVRGHCQAGSLTGA 47
G+T+ R R A W RG A RR +LP G +AG G+
Sbjct: 36 GQTLTRGPRTCAVWRRGRAAVRRRRLPAASAEGGAKAGRSLGS 78
>04_01_0416 -
5504415-5504590,5509032-5509116,5509190-5509322,
5509426-5510312
Length = 426
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/36 (47%), Positives = 20/36 (55%)
Frame = +2
Query: 281 PLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDS 388
PL+ P AR SSTGSSFP S P ++ L S
Sbjct: 47 PLIHPTPARF-ISSTGSSFPPYSEPPPSAPMLELGS 81
>02_05_0726 -
31252210-31253166,31253667-31253840,31254320-31254364,
31254463-31254573,31254669-31254746,31255170-31255234,
31255358-31255733,31256891-31257035,31257308-31257462,
31259036-31259182
Length = 750
Score = 27.9 bits (59), Expect = 7.1
Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Frame = +2
Query: 62 PRLAVSSNRITREF*TATSVSATSPLCTLGTKHRAPADI--IDRAPLP------PNRVSN 217
P LA+ + I ++F ++ TS G H + AP P P+ +++
Sbjct: 84 PLLALPNTAIIKDFVGFCHIATTSSSPKTGQGHEPTTCFRPVLLAPSPLCLTRGPHTITH 143
Query: 218 ETMKVVVFQRRSPKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVP 364
+ SP Y P ++ N + S +T S P PK P
Sbjct: 144 QIEAPQADHVEDSVSSPKYVKPAVAKQNGEVVSRATKSDAPVSKPKVDP 192
>02_04_0193 -
20801959-20802583,20803372-20803448,20803530-20803646,
20804147-20804250,20804359-20804428,20804547-20804644,
20804747-20804840,20805269-20805359,20805453-20805545,
20805635-20805960,20806162-20806641
Length = 724
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +2
Query: 248 RSPKRSPTYATPLMSPYNARLESSSTGSSFPA 343
RSP RSP + PL P+ +SS+ PA
Sbjct: 571 RSPSRSPVRSPPLTPPHQVPTTTSSSSPPPPA 602
>08_02_0203 - 14231134-14231907
Length = 257
Score = 27.5 bits (58), Expect = 9.4
Identities = 24/67 (35%), Positives = 33/67 (49%)
Frame = +2
Query: 149 GTKHRAPADIIDRAPLPPNRVSNETMKVVVFQRRSPKRSPTYATPLMSPYNARLESSSTG 328
G HR ADI P PP+ + E + + R S R A P + +A + SSS+G
Sbjct: 196 GGSHRVVADI----P-PPSGLLVEGPNHIRYYRGSCYRLVMQAPPPLDD-DAEMTSSSSG 249
Query: 329 SSFPADS 349
S P+DS
Sbjct: 250 SPGPSDS 256
>06_03_0507 +
21603472-21603750,21604371-21604463,21605046-21605372,
21605588-21605863,21606095-21607114
Length = 664
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +3
Query: 51 PVKLPAWQCPRTGSRGSFKRRRAFPPRHHSARLERNTVRPP 173
P++LPA + P T + +R +AF +S R ++T RPP
Sbjct: 398 PLQLPAGEPPVTPAWNDTQRSKAFT---YSIRARKDTNRPP 435
>01_06_1759 +
39689410-39689573,39689728-39689923,39690014-39690103,
39690221-39690277,39690391-39690460,39690747-39690811,
39691408-39691462,39691704-39691831,39691919-39691950,
39692205-39692274,39692723-39692824,39692921-39693010,
39693084-39693232,39693620-39693731,39695332-39695412,
39695481-39695705,39695815-39695937,39696021-39696137
Length = 641
Score = 27.5 bits (58), Expect = 9.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +1
Query: 10 ALGHLRYSLTDVPPQSNSPPGSVLEP 87
ALGH+ L + P ++ PP ++P
Sbjct: 494 ALGHIELDLPEAPEKAPKPPAQAVDP 519
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,788,969
Number of Sequences: 37544
Number of extensions: 427613
Number of successful extensions: 1504
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1502
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1549385732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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