Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0096
(830 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein. 31 5.1
AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein. 31 5.1
AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein. 31 5.1
AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein. 31 5.1
AY358733-1|AAQ89095.1| 622|Homo sapiens CGLQ1891 protein. 31 6.8
AY280614-1|AAP36706.1| 622|Homo sapiens synleurin protein. 31 6.8
AK123022-1|BAC85517.1| 622|Homo sapiens protein ( Homo sapiens ... 31 6.8
X79204-1|CAA55793.1| 816|Homo sapiens ataxin-1 protein. 30 8.9
BC117125-1|AAI17126.1| 815|Homo sapiens ataxin 1 protein. 30 8.9
AL009031-2|CAA15622.1| 815|Homo sapiens ataxin 1 protein. 30 8.9
>AY024361-1|AAK00583.1| 4911|Homo sapiens MLL3 protein.
Length = 4911
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -2
Query: 286 RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 107
RH + P P+F GP+ RR L PN + + D ++ S +++ S S +
Sbjct: 2589 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 2646
Query: 106 ATLGYPVEHSF 74
TL +P+ F
Sbjct: 2647 RTLNHPLGGEF 2657
>AF264750-1|AAF74766.2| 4025|Homo sapiens ALR-like protein protein.
Length = 4025
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -2
Query: 286 RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 107
RH + P P+F GP+ RR L PN + + D ++ S +++ S S +
Sbjct: 1650 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 1707
Query: 106 ATLGYPVEHSF 74
TL +P+ F
Sbjct: 1708 RTLNHPLGGEF 1718
>AC006474-1|AAS00364.1| 2185|Homo sapiens unknown protein.
Length = 2185
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -2
Query: 286 RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 107
RH + P P+F GP+ RR L PN + + D ++ S +++ S S +
Sbjct: 1650 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 1707
Query: 106 ATLGYPVEHSF 74
TL +P+ F
Sbjct: 1708 RTLNHPLGGEF 1718
>AB040939-1|BAA96030.2| 3310|Homo sapiens KIAA1506 protein protein.
Length = 3310
Score = 31.1 bits (67), Expect = 5.1
Identities = 20/71 (28%), Positives = 33/71 (46%)
Frame = -2
Query: 286 RHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSRRRLQ 107
RH + P P+F GP+ RR L PN + + D ++ S +++ S S +
Sbjct: 2034 RHGNFIPRPDFPGPRHTDPMRRPPQGL--PNQLPVHPDLEQVPPSQQEQGHSVHSSSMVM 2091
Query: 106 ATLGYPVEHSF 74
TL +P+ F
Sbjct: 2092 RTLNHPLGGEF 2102
>AY358733-1|AAQ89095.1| 622|Homo sapiens CGLQ1891 protein.
Length = 622
Score = 30.7 bits (66), Expect = 6.8
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 22 FRNPVSGTVSIIVPSSLKTSVRRG---NPKWPEDAAERSGKSFLFC 150
F NP+ T + V L TSV N P DAA SGK+ L C
Sbjct: 472 FGNPLETTAVLPVQIQLTTSVTLNLEKNSALPNDAASMSGKTSLIC 517
>AY280614-1|AAP36706.1| 622|Homo sapiens synleurin protein.
Length = 622
Score = 30.7 bits (66), Expect = 6.8
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 22 FRNPVSGTVSIIVPSSLKTSVRRG---NPKWPEDAAERSGKSFLFC 150
F NP+ T + V L TSV N P DAA SGK+ L C
Sbjct: 472 FGNPLETTAVLPVQIQLTTSVTLNLEKNSALPNDAASMSGKTSLIC 517
>AK123022-1|BAC85517.1| 622|Homo sapiens protein ( Homo sapiens
cDNA FLJ41026 fis, clone BRAMY2004771, weakly similar
to CHONDROADHERIN PRECURSOR. ).
Length = 622
Score = 30.7 bits (66), Expect = 6.8
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +1
Query: 22 FRNPVSGTVSIIVPSSLKTSVRRG---NPKWPEDAAERSGKSFLFC 150
F NP+ T + V L TSV N P DAA SGK+ L C
Sbjct: 472 FGNPLETTAVLPVQIQLTTSVTLNLEKNSALPNDAASMSGKTSLIC 517
>X79204-1|CAA55793.1| 816|Homo sapiens ataxin-1 protein.
Length = 816
Score = 30.3 bits (65), Expect = 8.9
Identities = 25/98 (25%), Positives = 44/98 (44%)
Frame = -2
Query: 298 YEPARHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSR 119
YE +RH+ VHPSP + SG R + +PN + D +E++++ +E S T
Sbjct: 357 YE-SRHVVVHPSPSDYSSRDPSGVR--ASVMVLPNSNTPAAD-LEVQQATHREASPSTLN 412
Query: 118 RRLQATLGYPVEHSFLKTRERLLKRFR*PGSGIGTGFP 5
+ LG P S+ + +++ + G P
Sbjct: 413 DKSGLHLGKPGHRSYALSPHTVIQTTHSASEPLPVGLP 450
>BC117125-1|AAI17126.1| 815|Homo sapiens ataxin 1 protein.
Length = 815
Score = 30.3 bits (65), Expect = 8.9
Identities = 25/98 (25%), Positives = 44/98 (44%)
Frame = -2
Query: 298 YEPARHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSR 119
YE +RH+ VHPSP + SG R + +PN + D +E++++ +E S T
Sbjct: 356 YE-SRHVVVHPSPSDYSSRDPSGVR--ASVMVLPNSNTPAAD-LEVQQATHREASPSTLN 411
Query: 118 RRLQATLGYPVEHSFLKTRERLLKRFR*PGSGIGTGFP 5
+ LG P S+ + +++ + G P
Sbjct: 412 DKSGLHLGKPGHRSYALSPHTVIQTTHSASEPLPVGLP 449
>AL009031-2|CAA15622.1| 815|Homo sapiens ataxin 1 protein.
Length = 815
Score = 30.3 bits (65), Expect = 8.9
Identities = 25/98 (25%), Positives = 44/98 (44%)
Frame = -2
Query: 298 YEPARHLHVHPSPEFQGPQRVSGHRRKCGALRVPNHISLL*DSMELERSGRKENSSRTSR 119
YE +RH+ VHPSP + SG R + +PN + D +E++++ +E S T
Sbjct: 356 YE-SRHVVVHPSPSDYSSRDPSGVR--ASVMVLPNSNTPAAD-LEVQQATHREASPSTLN 411
Query: 118 RRLQATLGYPVEHSFLKTRERLLKRFR*PGSGIGTGFP 5
+ LG P S+ + +++ + G P
Sbjct: 412 DKSGLHLGKPGHRSYALSPHTVIQTTHSASEPLPVGLP 449
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,091,706
Number of Sequences: 237096
Number of extensions: 2919448
Number of successful extensions: 8456
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8456
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10426655866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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