Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0094
         (561 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003563-1|AAO39567.1|  443|Drosophila melanogaster LP03430p pro...    38   0.007
AY069697-1|AAL39842.1|  443|Drosophila melanogaster LD46767p pro...    38   0.007
AE014134-1641|AAF52777.1|  443|Drosophila melanogaster CG4422-PA...    38   0.007
L03209-1|AAA28567.1|  448|Drosophila melanogaster GDP dissociati...    37   0.021

>BT003563-1|AAO39567.1|  443|Drosophila melanogaster LP03430p
           protein.
          Length = 443

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = -2

Query: 560 DATTHFETTCLDVLKIYNMVLGK 492
           DATTHFETTCLDVL I+    G+
Sbjct: 405 DATTHFETTCLDVLNIFKRGTGE 427



 Score = 37.1 bits (82), Expect = 0.016
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = -1

Query: 504 GTGEEFDFSKVKLELGEEDQ 445
           GTGE FDFSK+K ELG+E+Q
Sbjct: 424 GTGETFDFSKIKHELGDEEQ 443


>AY069697-1|AAL39842.1|  443|Drosophila melanogaster LD46767p
           protein.
          Length = 443

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = -2

Query: 560 DATTHFETTCLDVLKIYNMVLGK 492
           DATTHFETTCLDVL I+    G+
Sbjct: 405 DATTHFETTCLDVLNIFKRGTGE 427



 Score = 37.1 bits (82), Expect = 0.016
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = -1

Query: 504 GTGEEFDFSKVKLELGEEDQ 445
           GTGE FDFSK+K ELG+E+Q
Sbjct: 424 GTGETFDFSKIKHELGDEEQ 443


>AE014134-1641|AAF52777.1|  443|Drosophila melanogaster CG4422-PA
           protein.
          Length = 443

 Score = 38.3 bits (85), Expect = 0.007
 Identities = 16/23 (69%), Positives = 18/23 (78%)
 Frame = -2

Query: 560 DATTHFETTCLDVLKIYNMVLGK 492
           DATTHFETTCLDVL I+    G+
Sbjct: 405 DATTHFETTCLDVLNIFKRGTGE 427



 Score = 37.1 bits (82), Expect = 0.016
 Identities = 15/20 (75%), Positives = 18/20 (90%)
 Frame = -1

Query: 504 GTGEEFDFSKVKLELGEEDQ 445
           GTGE FDFSK+K ELG+E+Q
Sbjct: 424 GTGETFDFSKIKHELGDEEQ 443


>L03209-1|AAA28567.1|  448|Drosophila melanogaster GDP dissociation
           inhibitor protein.
          Length = 448

 Score = 36.7 bits (81), Expect = 0.021
 Identities = 20/41 (48%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
 Frame = -2

Query: 560 DATTHFETTCLDVLKIYNMVLGKNL-ISLKSSWNLVKRISK 441
           DATTHFETTC DVL I+    G+    S     + V R SK
Sbjct: 406 DATTHFETTCWDVLNIFKRGTGETFDFSKDQGTSWVTRSSK 446


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,746,821
Number of Sequences: 53049
Number of extensions: 383609
Number of successful extensions: 444
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 443
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2172596895
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)