Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0092
         (667 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P04148 Cluster: Fibrohexamerin precursor; n=2; Bombyx|R...   104   2e-21
UniRef50_Q9BLL4 Cluster: Fibroin P25; n=1; Papilio xuthus|Rep: F...    55   1e-06
UniRef50_O62605 Cluster: Fibrohexamerin precursor; n=2; Obtectom...    52   1e-05
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g...    41   0.031
UniRef50_Q14UU6 Cluster: Low molecular weight silk protein; n=1;...    39   0.094
UniRef50_Q86L53 Cluster: Similar to Mus musculus (Mouse). 0 day ...    36   0.88 
UniRef50_Q4FN76 Cluster: Putative uncharacterized protein; n=2; ...    33   4.7  
UniRef50_A4QWW1 Cluster: Predicted protein; n=1; Magnaporthe gri...    33   4.7  
UniRef50_Q8IBS2 Cluster: Putative uncharacterized protein PF07_0...    33   8.2  
UniRef50_Q5CUF6 Cluster: Putative uncharacterized protein; n=2; ...    33   8.2  

>UniRef50_P04148 Cluster: Fibrohexamerin precursor; n=2; Bombyx|Rep:
           Fibrohexamerin precursor - Bombyx mori (Silk moth)
          Length = 220

 Score =  104 bits (250), Expect = 2e-21
 Identities = 45/49 (91%), Positives = 46/49 (93%)
 Frame = +2

Query: 32  DPMTQRTAQWLSKDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGCHH 178
           +P  QRTAQWLSKDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGC H
Sbjct: 172 NPNDQRTAQWLSKDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGCQH 220


>UniRef50_Q9BLL4 Cluster: Fibroin P25; n=1; Papilio xuthus|Rep:
           Fibroin P25 - Papilio xuthus
          Length = 215

 Score = 55.2 bits (127), Expect = 1e-06
 Identities = 23/48 (47%), Positives = 37/48 (77%)
 Frame = +2

Query: 32  DPMTQRTAQWLSKDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGCH 175
           +P  ++TA +LS+DLTLL+I+ERE  F + + LAR FI+  +C++GC+
Sbjct: 167 NPNNKQTANYLSRDLTLLNIFERECFFWRASLLARYFINSLICNYGCN 214


>UniRef50_O62605 Cluster: Fibrohexamerin precursor; n=2;
           Obtectomera|Rep: Fibrohexamerin precursor - Galleria
           mellonella (Wax moth)
          Length = 218

 Score = 52.0 bits (119), Expect = 1e-05
 Identities = 23/47 (48%), Positives = 32/47 (68%)
 Frame = +2

Query: 32  DPMTQRTAQWLSKDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGC 172
           DP  + TA +LS+DL+LL+IYERE    +   L R F++  +CDFGC
Sbjct: 171 DPKDRPTANFLSRDLSLLNIYERETFAYRPPQLIRQFVNSLICDFGC 217


>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
           gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
          Length = 268

 Score = 40.7 bits (91), Expect = 0.031
 Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
 Frame = -2

Query: 426 IFYQLHFLSFIKLC-INFVNSSRNISKLKLNYALLTVFMRKILVIPNDSAYIYIFLXIDT 250
           IF  L  L+F+KL  IN  NS   ISK+K N +L  +++ KIL+I N + ++  F   + 
Sbjct: 68  IFLFLLNLNFLKLLNININNSFNTISKIKKNISLYYIYIIKILLIFNYNLFLLFFYKTNK 127

Query: 249 FN 244
           +N
Sbjct: 128 YN 129


>UniRef50_Q14UU6 Cluster: Low molecular weight silk protein; n=1;
           Yponomeuta evonymellus|Rep: Low molecular weight silk
           protein - Yponomeuta evonymella (Bird-cherry ermine
           moth)
          Length = 217

 Score = 39.1 bits (87), Expect = 0.094
 Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +2

Query: 14  VCPSPH-DPMTQRTAQWLSKDLTLLHIYEREHIFGKRNWLARSFISRTLCDFGCH 175
           V P  H DP  + T+++L++D++ L  +ERE    + + +   F+   +CDFGC+
Sbjct: 161 VLPIFHIDPKDKLTSKFLTRDMSELFAFERETFNYRGSGIMNWFLQHKICDFGCN 215


>UniRef50_Q86L53 Cluster: Similar to Mus musculus (Mouse). 0 day
           neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130103I15 product:polycystic kidney
           disease 2, full insert sequence; n=3; Dictyostelium
           discoideum|Rep: Similar to Mus musculus (Mouse). 0 day
           neonate eyeball cDNA, RIKEN full-length enriched
           library, clone:E130103I15 product:polycystic kidney
           disease 2, full insert sequence - Dictyostelium
           discoideum (Slime mold)
          Length = 504

 Score = 35.9 bits (79), Expect = 0.88
 Identities = 20/60 (33%), Positives = 33/60 (55%)
 Frame = -1

Query: 649 VLFEISILEFRIVMSKSFR*EVNHRRNNIHWMFGTTSSRIKTVSFLIFLI*NFIGECFKG 470
           VL++IS +   ++  K+FR  V HRR  I W+   + SR++ ++F I      +G  F G
Sbjct: 174 VLYQISAINILLMSFKTFRFLVVHRRLYILWI-AISQSRLQLITFTIMFCIMMLGFLFSG 232


>UniRef50_Q4FN76 Cluster: Putative uncharacterized protein; n=2;
           Candidatus Pelagibacter ubique|Rep: Putative
           uncharacterized protein - Pelagibacter ubique
          Length = 562

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
 Frame = -2

Query: 435 ATFIFYQLHFLSFIKLCINFVNSSRNISKLKLNYALLTVFMRKILVIPN-DSAYIYIFLX 259
           +TF  +  +F+ +    +N++N S NI    +N+ L  + + KIL IPN  + Y+  F  
Sbjct: 76  STFFSFIQNFILYKIFKLNYLNLSSNIFIFLMNFYLFYIILCKILNIPNLHNLYLACFFT 135

Query: 258 IDTFNAKRPYVE 223
           +      + Y E
Sbjct: 136 LTIGYGPQTYNE 147


>UniRef50_A4QWW1 Cluster: Predicted protein; n=1; Magnaporthe
           grisea|Rep: Predicted protein - Magnaporthe grisea (Rice
           blast fungus) (Pyricularia grisea)
          Length = 247

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 93  TRESTSSERGTGWRGPSSAEHSATSVVTTERHFSNIIF 206
           +R+   ++  T W  P SA H   ++V  ERH S+++F
Sbjct: 30  SRDEIQNDAITAWAAPGSAVHGRQALVHGERHASSLVF 67


>UniRef50_Q8IBS2 Cluster: Putative uncharacterized protein PF07_0074;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PF07_0074 - Plasmodium falciparum
            (isolate 3D7)
          Length = 1530

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 12/43 (27%), Positives = 18/43 (41%)
 Frame = +3

Query: 81   CCTFTRESTSSERGTGWRGPSSAEHSATSVVTTERHFSNIIFY 209
            CC     S   +R   W    S+ H     +   R +SNI+F+
Sbjct: 1317 CCNINNMSKKKKRSVSWESTRSSSHEGEERMKGGRDYSNILFF 1359


>UniRef50_Q5CUF6 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium parvum Iowa II
          Length = 2421

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = -2

Query: 396 IKLCINFVNSSRNISKLKLNYALLTVFMRKILVI-PNDSAYIYIFLXIDTFN 244
           I L I FV ++RN+ +  LNY  L  FM+K  +I PN S Y    L  D+FN
Sbjct: 62  ILLLIAFVENNRNLKRKLLNY--LRSFMQKSKIIQPNISEYTQFVL--DSFN 109


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 618,168,139
Number of Sequences: 1657284
Number of extensions: 11765934
Number of successful extensions: 30081
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 29115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30071
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)