Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0092
         (667 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical...    31   0.56 
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical...    31   0.56 
AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical ...    29   3.9  
AF022974-3|AAC48037.1|  346|Caenorhabditis elegans Seven tm rece...    29   3.9  
Z68227-8|CAA92513.1|  275|Caenorhabditis elegans Hypothetical pr...    28   5.2  
U28929-4|AAA68347.3|  338|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AF016655-3|AAU05587.1|  322|Caenorhabditis elegans Serpentine re...    28   5.2  
U64862-1|AAM69079.2|  593|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>AL032623-17|CAN86638.1| 1398|Caenorhabditis elegans Hypothetical
           protein Y43F8B.3b protein.
          Length = 1398

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 140 RTSPASSSFRRCALSRKCAAGSDL*TTTALCVGS 39
           +T  AS++F  C L+  C  GSDL +TT  C G+
Sbjct: 866 QTCSASANFNTCPLNHWCHIGSDL-STTVCCPGA 898


>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
            protein Y43F8B.3a protein.
          Length = 1816

 Score = 31.5 bits (68), Expect = 0.56
 Identities = 15/34 (44%), Positives = 21/34 (61%)
 Frame = -3

Query: 140  RTSPASSSFRRCALSRKCAAGSDL*TTTALCVGS 39
            +T  AS++F  C L+  C  GSDL +TT  C G+
Sbjct: 1284 QTCSASANFNTCPLNHWCHIGSDL-STTVCCPGA 1316


>AF043706-1|AAB97603.3| 1623|Caenorhabditis elegans Hypothetical
            protein ZC123.3 protein.
          Length = 1623

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = -1

Query: 217  FAK*NIMLEKCRSVVTTEVAECSADEGPRQPVPLSEDVLSLVNVQQGQIFRQPL 56
            F + N+  E    + T  V ECS ++  + P PL       +N    QI+  P+
Sbjct: 1444 FLRNNLKREGVSELTTASVTECSPEKKAKLPNPLDLASFPFLNTFDIQIYGTPI 1497


>AF022974-3|AAC48037.1|  346|Caenorhabditis elegans Seven tm
           receptor protein 207 protein.
          Length = 346

 Score = 28.7 bits (61), Expect = 3.9
 Identities = 17/73 (23%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
 Frame = -2

Query: 465 HVIFLILNIFATFIFYQLHFLSFIKLCINFVNSSRNISKLKLNYALL--TVFMRKILVIP 292
           +++  I+++   F F    ++S  K+C   V+ +    + +L Y+L+  T+    ++ IP
Sbjct: 207 NILITIVSLITVFYFGFRCYISLQKICKQNVSQNTRGLQKQLFYSLIAQTLIPLFLMYIP 266

Query: 291 NDSAYIYIFLXID 253
             + ++  FL ID
Sbjct: 267 GCAMFLLSFLTID 279


>Z68227-8|CAA92513.1|  275|Caenorhabditis elegans Hypothetical
           protein F49C12.10 protein.
          Length = 275

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 25/97 (25%), Positives = 44/97 (45%), Gaps = 7/97 (7%)
 Frame = -2

Query: 465 HVIFLILNI----FATFIFYQLHFLSFIKLCINFVNSSRNISKLKLNYALLTVFMRKILV 298
           H+  L+L +    F  FI Y L  +   KL + F+N     S     YA + +FM  +  
Sbjct: 6   HISSLLLQLWLWFFDRFIMYPLMRIVAPKLGVRFMNLGYWPSSAP-QYAKMRMFMEDLGD 64

Query: 297 IP---NDSAYIYIFLXIDTFNAKRPYVEKYLRNRILC 196
           +    +D A+IY++    + +   PY E++    + C
Sbjct: 65  LDEYESDRAHIYLYEKALSMHPNYPYFEQFEILEVSC 101


>U28929-4|AAA68347.3|  338|Caenorhabditis elegans Hypothetical
           protein F09C12.6 protein.
          Length = 338

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
 Frame = -2

Query: 444 NIFATFIFY---QLHFLSFIKLCINFVNSSRNISKL------KLNYALLTVFMRKILV-I 295
           N +ATFI+      +  SF+  CI  + +S  I+KL       + Y+L+  F+  +LV I
Sbjct: 191 NDYATFIYICNISGYLFSFLINCITMIKASSTINKLVRRQIINVRYSLVISFISFVLVSI 250

Query: 294 PN 289
           PN
Sbjct: 251 PN 252


>AF016655-3|AAU05587.1|  322|Caenorhabditis elegans Serpentine
           receptor, class z protein67 protein.
          Length = 322

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -2

Query: 465 HVIFLILNIFATFIFYQLHFLSFIK--LCINFVNSSRNISKL 346
           H  +LI ++F   IFY +H L F+   L I  + S R +S L
Sbjct: 173 HPYYLIWSVFFITIFYTMHILLFLSALLYIPILISIRKLSHL 214


>U64862-1|AAM69079.2|  593|Caenorhabditis elegans Hypothetical
           protein ZC8.6 protein.
          Length = 593

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 15/49 (30%), Positives = 22/49 (44%)
 Frame = +2

Query: 2   TWPGVCPSPHDPMTQRTAQWLSKDLTLLHIYEREHIFGKRNWLARSFIS 148
           TW     +   P+TQR  Q+L + L  L    R    G  NWL +  ++
Sbjct: 276 TWVNQPETAPPPVTQREFQFLFEKLVALDYIIRNTDRGSDNWLIKYILA 324


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,858,286
Number of Sequences: 27780
Number of extensions: 303295
Number of successful extensions: 836
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1497472076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)