Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0088
         (330 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK027852-1|BAB55411.1|  792|Homo sapiens protein ( Homo sapiens ...    29   3.5  
AY003717-1|AAF85717.1|  103|Homo sapiens immunoglobulin alpha he...    29   4.6  
AY003715-1|AAF85715.1|  104|Homo sapiens immunoglobulin alpha he...    29   4.6  
BC013997-1|AAH13997.1|  353|Homo sapiens guanine nucleotide bind...    28   6.0  
AF501885-1|AAM15921.1|  353|Homo sapiens guanine nucleotide bind...    28   6.0  
AF300650-1|AAG18444.1|  395|Homo sapiens guanine nucleotide bind...    28   6.0  
AF017656-1|AAC63826.1|  353|Homo sapiens G protein beta 5 subuni...    28   6.0  
AK130228-1|BAC85308.1|  147|Homo sapiens protein ( Homo sapiens ...    28   8.0  
AF039597-1|AAC52087.1|  156|Homo sapiens Ku86 autoantigen relate...    28   8.0  

>AK027852-1|BAB55411.1|  792|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14946 fis, clone PLACE2000034, weakly similar to
           LAR PROTEIN PRECURSOR (EC 3.1.3.48). ).
          Length = 792

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -2

Query: 98  QVSRCTLLTGFRLPWPPSCCHERPTP 21
           +V+R +L    RLP PPSCC + P+P
Sbjct: 728 RVNRPSLRWHHRLP-PPSCCQQPPSP 752


>AY003717-1|AAF85717.1|  103|Homo sapiens immunoglobulin alpha heavy
           chain variable region protein.
          Length = 103

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 83  TLLTGFRLPWPPSCCHERPTP 21
           +L TG R PW PS  H RP P
Sbjct: 80  SLNTGAREPWSPSPQHPRPAP 100


>AY003715-1|AAF85715.1|  104|Homo sapiens immunoglobulin alpha heavy
           chain variable region protein.
          Length = 104

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = -2

Query: 83  TLLTGFRLPWPPSCCHERPTP 21
           +L TG R PW PS  H RP P
Sbjct: 80  SLNTGAREPWSPSPQHPRPAP 100


>BC013997-1|AAH13997.1|  353|Homo sapiens guanine nucleotide binding
           protein (G protein), beta 5 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 57  WKSESGKECATTHLPKQPALKMDGAEAFCLYTTVTGTCDAKFLIW 191
           W  ESG+   + H      L +D A +    T V+G CD K ++W
Sbjct: 180 WDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW 224


>AF501885-1|AAM15921.1|  353|Homo sapiens guanine nucleotide binding
           protein beta 5 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 57  WKSESGKECATTHLPKQPALKMDGAEAFCLYTTVTGTCDAKFLIW 191
           W  ESG+   + H      L +D A +    T V+G CD K ++W
Sbjct: 180 WDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW 224


>AF300650-1|AAG18444.1|  395|Homo sapiens guanine nucleotide binding
           protein beta subunit 5L protein.
          Length = 395

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 57  WKSESGKECATTHLPKQPALKMDGAEAFCLYTTVTGTCDAKFLIW 191
           W  ESG+   + H      L +D A +    T V+G CD K ++W
Sbjct: 222 WDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW 266


>AF017656-1|AAC63826.1|  353|Homo sapiens G protein beta 5 subunit
           protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = +3

Query: 57  WKSESGKECATTHLPKQPALKMDGAEAFCLYTTVTGTCDAKFLIW 191
           W  ESG+   + H      L +D A +    T V+G CD K ++W
Sbjct: 180 WDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVW 224


>AK130228-1|BAC85308.1|  147|Homo sapiens protein ( Homo sapiens
           cDNA FLJ26718 fis, clone PNC03325. ).
          Length = 147

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -3

Query: 325 VSLPGLRWSIATTTKICTDGGSKRSRPDPSALSVAHVLLV 206
           +++ G+ W +     +CTD     S P P  L + H +L+
Sbjct: 84  MNVAGISWHLYIFHLVCTDTSVSSSAPLPCPLPLIHQMLI 123


>AF039597-1|AAC52087.1|  156|Homo sapiens Ku86 autoantigen related
           protein 1 protein.
          Length = 156

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -3

Query: 322 SLPGLRWSIATTTKICTDGGSKRSRP 245
           SL   R    TT KIC  GGS  +RP
Sbjct: 23  SLDRTRRETRTTDKICVSGGSNTTRP 48


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 56,725,328
Number of Sequences: 237096
Number of extensions: 1133813
Number of successful extensions: 2509
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2509
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1743854340
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)