Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0088
(330 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire prot... 29 1.9
EF120981-1|ABO93159.1| 637|Drosophila melanogaster misfire prot... 27 4.3
EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire prot... 27 4.3
EF120978-1|ABO93156.1| 839|Drosophila melanogaster misfire prot... 27 4.3
EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire prot... 27 4.3
EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire prot... 27 4.3
AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein. 27 4.3
AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA... 27 4.3
AY118298-1|AAM48327.1| 259|Drosophila melanogaster GH07363p pro... 27 7.5
M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lo... 26 10.0
AY128468-1|AAM75061.1| 1593|Drosophila melanogaster RE21811p pro... 26 10.0
AY119261-1|AAM51121.1| 940|Drosophila melanogaster SD22791p pro... 26 10.0
AY118737-1|AAM50597.1| 102|Drosophila melanogaster GH04604p pro... 26 10.0
AY052069-1|AAK93493.1| 502|Drosophila melanogaster SD02279p pro... 26 10.0
AL031583-4|CAA20898.1| 1045|Drosophila melanogaster EG:34F3.4 pr... 26 10.0
AF125986-1|AAD22080.1| 704|Drosophila melanogaster putative tra... 26 10.0
AF017777-5|AAC28409.1| 1597|Drosophila melanogaster small optic ... 26 10.0
AE014298-3122|AAF50827.3| 395|Drosophila melanogaster CG1391-PA... 26 10.0
AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB... 26 10.0
AE014298-3039|ABI30990.1| 658|Drosophila melanogaster CG34145-P... 26 10.0
AE014298-1028|AAF46251.3| 704|Drosophila melanogaster CG9653-PA... 26 10.0
AE014298-108|AAF45550.2| 940|Drosophila melanogaster CG16989-PA... 26 10.0
AB023583-1|BAA76710.1| 704|Drosophila melanogaster Brk protein. 26 10.0
>EF120977-1|ABO93155.1| 1349|Drosophila melanogaster misfire
protein.
Length = 1349
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +1
Query: 61 SRNPVRSVQRLTCRSNQP*KWMALKR 138
SRNP+R +QRL + P KW+ + R
Sbjct: 479 SRNPLRKLQRLKYLTPPPLKWVPIAR 504
>EF120981-1|ABO93159.1| 637|Drosophila melanogaster misfire
protein.
Length = 637
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 61 SRNPVRSVQRLTCRSNQP*KWMALKR 138
S+NP+R +QRL + P KW+ + R
Sbjct: 477 SKNPLRKLQRLKYLTPPPLKWVPIAR 502
>EF120979-1|ABO93157.1| 1396|Drosophila melanogaster misfire
protein.
Length = 1396
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 61 SRNPVRSVQRLTCRSNQP*KWMALKR 138
S+NP+R +QRL + P KW+ + R
Sbjct: 567 SKNPLRKLQRLKYLTPPPLKWVPIAR 592
>EF120978-1|ABO93156.1| 839|Drosophila melanogaster misfire
protein.
Length = 839
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 61 SRNPVRSVQRLTCRSNQP*KWMALKR 138
S+NP+R +QRL + P KW+ + R
Sbjct: 28 SKNPLRKLQRLKYLTPPPLKWVPIAR 53
>EF120976-1|ABO93154.1| 1437|Drosophila melanogaster misfire
protein.
Length = 1437
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 61 SRNPVRSVQRLTCRSNQP*KWMALKR 138
S+NP+R +QRL + P KW+ + R
Sbjct: 567 SKNPLRKLQRLKYLTPPPLKWVPIAR 592
>EF120975-1|ABO93153.1| 1659|Drosophila melanogaster misfire
protein.
Length = 1659
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 61 SRNPVRSVQRLTCRSNQP*KWMALKR 138
S+NP+R +QRL + P KW+ + R
Sbjct: 789 SKNPLRKLQRLKYLTPPPLKWVPIAR 814
>AY180917-1|AAN87269.1| 2360|Drosophila melanogaster ORF protein.
Length = 2360
Score = 27.5 bits (58), Expect = 4.3
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Frame = +3
Query: 21 RRWSL---MTAGRWPWKSESGKECATTHLPKQPALKMDGAEAFCLYTTV 158
++W L + G WPW S + C QP LK D A A C+Y TV
Sbjct: 2147 QKWQLNKRICKGSWPWNSANDNACEI-----QP-LKPDKA-ANCIYKTV 2188
>AE014296-1535|AAF50355.1| 1782|Drosophila melanogaster CG5747-PA
protein.
Length = 1782
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 61 SRNPVRSVQRLTCRSNQP*KWMALKR 138
S+NP+R +QRL + P KW+ + R
Sbjct: 751 SKNPLRKLQRLKYLTPPPLKWVPIAR 776
>AY118298-1|AAM48327.1| 259|Drosophila melanogaster GH07363p
protein.
Length = 259
Score = 26.6 bits (56), Expect = 7.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -2
Query: 116 QGWLLRQVSRCTLLTGFRLPWPPS 45
Q WLL+ V +LT + PWP S
Sbjct: 160 QWWLLQCVRHRQILTLYSFPWPKS 183
>M64084-1|AAB95431.1| 1597|Drosophila melanogaster small optic lobes
protein protein.
Length = 1597
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 13 TMKGVGRS*QQDGGHGSRNPVRSVQRLTCRSNQ 111
T+ + RS +D GHG P+R V L Q
Sbjct: 338 TITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQ 370
>AY128468-1|AAM75061.1| 1593|Drosophila melanogaster RE21811p
protein.
Length = 1593
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 13 TMKGVGRS*QQDGGHGSRNPVRSVQRLTCRSNQ 111
T+ + RS +D GHG P+R V L Q
Sbjct: 338 TITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQ 370
>AY119261-1|AAM51121.1| 940|Drosophila melanogaster SD22791p
protein.
Length = 940
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 110 WLLRQVSRCTLLTGFRLP 57
WLLRQV RC L G R+P
Sbjct: 472 WLLRQVLRC--LEGMRIP 487
>AY118737-1|AAM50597.1| 102|Drosophila melanogaster GH04604p
protein.
Length = 102
Score = 26.2 bits (55), Expect = 10.0
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -2
Query: 80 LLTGFRLPWPPSCCHE 33
LL R PWPP C H+
Sbjct: 24 LLCRTRAPWPPQCHHQ 39
>AY052069-1|AAK93493.1| 502|Drosophila melanogaster SD02279p
protein.
Length = 502
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 126 HPFSGLVASAGESLHTPYRIPTSM 55
HP+ G S G S+ + ++ PTSM
Sbjct: 339 HPYPGGCVSPGSSITSSFQCPTSM 362
>AL031583-4|CAA20898.1| 1045|Drosophila melanogaster EG:34F3.4
protein.
Length = 1045
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 110 WLLRQVSRCTLLTGFRLP 57
WLLRQV RC L G R+P
Sbjct: 577 WLLRQVLRC--LEGMRIP 592
>AF125986-1|AAD22080.1| 704|Drosophila melanogaster putative
transcription factor protein.
Length = 704
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 126 HPFSGLVASAGESLHTPYRIPTSM 55
HP+ G S G S+ + ++ PTSM
Sbjct: 541 HPYPGGCVSPGSSITSSFQCPTSM 564
>AF017777-5|AAC28409.1| 1597|Drosophila melanogaster small optic
lobes protein.
Length = 1597
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 13 TMKGVGRS*QQDGGHGSRNPVRSVQRLTCRSNQ 111
T+ + RS +D GHG P+R V L Q
Sbjct: 338 TITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQ 370
>AE014298-3122|AAF50827.3| 395|Drosophila melanogaster CG1391-PA,
isoform A protein.
Length = 395
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 13 TMKGVGRS*QQDGGHGSRNPVRSVQRLTCRSNQ 111
T+ + RS +D GHG P+R V L Q
Sbjct: 338 TITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQ 370
>AE014298-3121|AAF50826.4| 1594|Drosophila melanogaster CG1391-PB,
isoform B protein.
Length = 1594
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = +1
Query: 13 TMKGVGRS*QQDGGHGSRNPVRSVQRLTCRSNQ 111
T+ + RS +D GHG P+R V L Q
Sbjct: 338 TITTLSRSAAKDAGHGQMKPLRQVVNLNLNLQQ 370
>AE014298-3039|ABI30990.1| 658|Drosophila melanogaster CG34145-PA
protein.
Length = 658
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = -3
Query: 166 VPVTVVYRQNASAPSIFRAGCFGR*VVAHSLPDSDFHGHRPAVM 35
+P +++Y Q +A + G + AH+ P+S HG +VM
Sbjct: 544 LPASLLYSQLYTAANQSAHGFHSHTLPAHASPNSSVHGELQSVM 587
>AE014298-1028|AAF46251.3| 704|Drosophila melanogaster CG9653-PA
protein.
Length = 704
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 126 HPFSGLVASAGESLHTPYRIPTSM 55
HP+ G S G S+ + ++ PTSM
Sbjct: 541 HPYPGGCVSPGSSITSSFQCPTSM 564
>AE014298-108|AAF45550.2| 940|Drosophila melanogaster CG16989-PA
protein.
Length = 940
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = -2
Query: 110 WLLRQVSRCTLLTGFRLP 57
WLLRQV RC L G R+P
Sbjct: 472 WLLRQVLRC--LEGMRIP 487
>AB023583-1|BAA76710.1| 704|Drosophila melanogaster Brk protein.
Length = 704
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 126 HPFSGLVASAGESLHTPYRIPTSM 55
HP+ G S G S+ + ++ PTSM
Sbjct: 541 HPYPGGCVSPGSSITSSFQCPTSM 564
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,451,910
Number of Sequences: 53049
Number of extensions: 348675
Number of successful extensions: 929
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 714329562
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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