Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0080
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr... 29 3.1
U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical pr... 28 4.1
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 28 5.4
U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linke... 28 5.4
U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linke... 28 5.4
AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-lin... 28 5.4
AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-lin... 28 5.4
Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical pr... 27 7.2
U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical pr... 27 7.2
AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical ... 27 7.2
U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical pr... 27 9.5
U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical pr... 27 9.5
>Z83731-9|CAH10802.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 270 SPRTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 163
SPR F + I T P+ + +S SEP P+ G
Sbjct: 702 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 737
>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 270 SPRTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 163
SPR F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 270 SPRTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 163
SPR F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z81505-5|CAH10795.1| 1364|Caenorhabditis elegans Hypothetical
protein F16A11.3b protein.
Length = 1364
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 270 SPRTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 163
SPR F + I T P+ + +S SEP P+ G
Sbjct: 702 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 737
>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
protein F16A11.3a protein.
Length = 1490
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 270 SPRTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 163
SPR F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
protein F16A11.3c protein.
Length = 1046
Score = 28.7 bits (61), Expect = 3.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -1
Query: 270 SPRTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIG 163
SPR F + I T P+ + +S SEP P+ G
Sbjct: 828 SPRARSVSFGTNGSPISTSPRRKANSTSEPSPPNTG 863
>U29535-9|AAK31453.2| 2148|Caenorhabditis elegans Hypothetical
protein C25H3.8 protein.
Length = 2148
Score = 28.3 bits (60), Expect = 4.1
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -1
Query: 474 T*RTNIDQTRHRPHPLPVQT 415
T +++ID T H PHP+ VQT
Sbjct: 904 TLKSSIDITNHLPHPIAVQT 923
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = -1
Query: 264 RTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFG 85
RT P ++ + + S+S+ LP+ GF T K +P+ S A +G
Sbjct: 1193 RTEPEAEIVDVPVVKETKEKKGDSKSK--LPTFGFFSKTTKTTKTTGYPETSEAYTGELD 1250
Query: 84 LPRRTLVFKDEGTIIE 37
RT F EGT E
Sbjct: 1251 TTDRTHDF--EGTSFE 1264
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = -1
Query: 264 RTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFG 85
RT P ++ + + S+S+ LP+ GF T K +P+ S A +G
Sbjct: 1182 RTEPEAEIVDVPVVKETKEKKGDSKSK--LPTFGFFSKTTKTTKTTGYPETSEAYTGELD 1239
Query: 84 LPRRTLVFKDEGTIIE 37
RT F EGT E
Sbjct: 1240 TTDRTHDF--EGTSFE 1253
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = -1
Query: 264 RTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFG 85
RT P ++ + + S+S+ LP+ GF T K +P+ S A +G
Sbjct: 1182 RTEPEAEIVDVPVVKETKEKKGDSKSK--LPTFGFFSKTTKTTKTTGYPETSEAYTGELD 1239
Query: 84 LPRRTLVFKDEGTIIE 37
RT F EGT E
Sbjct: 1240 TTDRTHDF--EGTSFE 1253
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = -1
Query: 264 RTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFG 85
RT P ++ + + S+S+ LP+ GF T K +P+ S A +G
Sbjct: 1193 RTEPEAEIVDVPVVKETKEKKGDSKSK--LPTFGFFSKTTKTTKTTGYPETSEAYTGELD 1250
Query: 84 LPRRTLVFKDEGTIIE 37
RT F EGT E
Sbjct: 1251 TTDRTHDF--EGTSFE 1264
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = -1
Query: 264 RTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFG 85
RT P ++ + + S+S+ LP+ GF T K +P+ S A +G
Sbjct: 1182 RTEPEAEIVDVPVVKETKEKKGDSKSK--LPTFGFFSKTTKTTKTTGYPETSEAYTGELD 1239
Query: 84 LPRRTLVFKDEGTIIE 37
RT F EGT E
Sbjct: 1240 TTDRTHDF--EGTSFE 1253
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 27.9 bits (59), Expect = 5.4
Identities = 22/76 (28%), Positives = 32/76 (42%)
Frame = -1
Query: 264 RTSPPEFSRSAESIRTPPQMRCSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFG 85
RT P ++ + + S+S+ LP+ GF T K +P+ S A +G
Sbjct: 1182 RTEPEAEIVDVPVVKETKEKKGDSKSK--LPTFGFFSKTTKTTKTTGYPETSEAYTGELD 1239
Query: 84 LPRRTLVFKDEGTIIE 37
RT F EGT E
Sbjct: 1240 TTDRTHDF--EGTSFE 1253
>U23529-9|AAL32210.1| 713|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform b protein.
Length = 713
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 479 NEHNARTSTRPGTGRIRFPSKPDT 408
NE+ TS++PG R+ P+K DT
Sbjct: 561 NENRGETSSQPGRDRLAPPNKTDT 584
>U23529-8|AAL32209.1| 682|Caenorhabditis elegans G-protein-linked
acetylcholinereceptor protein 1, isoform a protein.
Length = 682
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 479 NEHNARTSTRPGTGRIRFPSKPDT 408
NE+ TS++PG R+ P+K DT
Sbjct: 530 NENRGETSSQPGRDRLAPPNKTDT 553
>AF117300-1|AAF26201.1| 713|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1a protein.
Length = 713
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 479 NEHNARTSTRPGTGRIRFPSKPDT 408
NE+ TS++PG R+ P+K DT
Sbjct: 561 NENRGETSSQPGRDRLAPPNKTDT 584
>AF075245-1|AAD13747.1| 682|Caenorhabditis elegans G protein-linked
acetylcholinereceptor GAR-1b protein.
Length = 682
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = -2
Query: 479 NEHNARTSTRPGTGRIRFPSKPDT 408
NE+ TS++PG R+ P+K DT
Sbjct: 530 NENRGETSSQPGRDRLAPPNKTDT 553
>Z70310-1|CAA94366.1| 552|Caenorhabditis elegans Hypothetical
protein R11A8.1 protein.
Length = 552
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 5/48 (10%)
Frame = -3
Query: 241 KVRREYPDTAANAVLFA---FRT--ISPFYRIPWNSNAQAEKKTLPGP 113
K+ +E D A N + FR I+PF P+ +N Q + +PGP
Sbjct: 435 KIEKEIADVAENQIRRIEENFRNPFIAPFAFFPYQNNFQMAPQNVPGP 482
>U41019-1|AAM51510.1| 542|Caenorhabditis elegans Hypothetical
protein C04E7.4 protein.
Length = 542
Score = 27.5 bits (58), Expect = 7.2
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 225 IRTPPQMRCSSRSEPYLPSIGFHGT 151
I T Q + SS +P+LP++GF GT
Sbjct: 299 IVTISQGKASSLYDPHLPTVGFDGT 323
>AC087794-3|AAG53700.1| 417|Caenorhabditis elegans Hypothetical
protein Y32G9A.9 protein.
Length = 417
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = -1
Query: 201 CSSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSGHFGLPRRTLVFKDEGTIIETVP 28
C++ P+L I T+ +RQ + P+L +A H + FK E T+P
Sbjct: 80 CTTNFTPFLRPITVPVTKGVRQGDPISPNLFSACLEHVFRKLSCIEFKGEAEDYNTIP 137
>U64833-8|AAB04820.1| 432|Caenorhabditis elegans Hypothetical
protein B0507.3 protein.
Length = 432
Score = 27.1 bits (57), Expect = 9.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -2
Query: 449 PGTGRIRFPSKPDTPRSSEPILIPKLRI 366
P ++ SKP TP + P+L+P++ +
Sbjct: 324 PNPAMVQKSSKPSTPIPAPPVLVPQVEL 351
>U53180-1|AAK68285.1| 492|Caenorhabditis elegans Hypothetical
protein D1014.7 protein.
Length = 492
Score = 27.1 bits (57), Expect = 9.5
Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 246 FSRSAESIRTPPQMRCSSRSEP--YLPSIGFHGTRT 145
FS S E+ T Q R + S P YLPSIG + T T
Sbjct: 11 FSASNENNETIKQGRDADSSSPSEYLPSIGHYFTHT 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,103,356
Number of Sequences: 27780
Number of extensions: 312803
Number of successful extensions: 1102
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1102
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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