Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0078
         (988 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF427102-1|AAL16098.1|  116|Drosophila melanogaster glutaredoxin...    91   3e-18
AE013599-3274|AAF46761.1|  116|Drosophila melanogaster CG7975-PA...    91   3e-18
AY118819-1|AAM50679.1|  114|Drosophila melanogaster GH24739p pro...    79   9e-15
AE014296-3069|AAF49222.1|  114|Drosophila melanogaster CG6852-PA...    79   9e-15
AY075095-1|AAL79357.1|  815|Drosophila melanogaster pygopus prot...    32   1.1  
AY058500-1|AAL13729.1|  815|Drosophila melanogaster LD18280p pro...    32   1.1  
AF457206-1|AAL91369.1|  815|Drosophila melanogaster pygopus prot...    32   1.1  
AE014297-4758|AAF57161.1|  815|Drosophila melanogaster CG11518-P...    32   1.1  
AY084192-1|AAL89930.1|  159|Drosophila melanogaster RH03087p pro...    29   7.5  
AE014298-2060|AAF48392.2|  159|Drosophila melanogaster CG14407-P...    29   7.5  

>AF427102-1|AAL16098.1|  116|Drosophila melanogaster glutaredoxin-1
           protein.
          Length = 116

 Score = 90.6 bits (215), Expect = 3e-18
 Identities = 42/81 (51%), Positives = 55/81 (67%)
 Frame = +1

Query: 7   QFXKEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTG 186
           QF ++ IS  KVV+  KS CP   +AK+ F K+     VIEL++RDDGN  Q  L ++TG
Sbjct: 23  QFVRDTISGNKVVIFSKSYCPYCSMAKEQFRKINVKATVIELDQRDDGNEIQAVLGEMTG 82

Query: 187 FRTVPQVFINGNCVGGGSDVK 249
            RTVP+ FI+G  VGGG+DVK
Sbjct: 83  SRTVPRCFIDGKFVGGGTDVK 103


>AE013599-3274|AAF46761.1|  116|Drosophila melanogaster CG7975-PA
           protein.
          Length = 116

 Score = 90.6 bits (215), Expect = 3e-18
 Identities = 42/81 (51%), Positives = 55/81 (67%)
 Frame = +1

Query: 7   QFXKEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTG 186
           QF ++ IS  KVV+  KS CP   +AK+ F K+     VIEL++RDDGN  Q  L ++TG
Sbjct: 23  QFVRDTISGNKVVIFSKSYCPYCSMAKEQFRKINVKATVIELDQRDDGNEIQAVLGEMTG 82

Query: 187 FRTVPQVFINGNCVGGGSDVK 249
            RTVP+ FI+G  VGGG+DVK
Sbjct: 83  SRTVPRCFIDGKFVGGGTDVK 103


>AY118819-1|AAM50679.1|  114|Drosophila melanogaster GH24739p
           protein.
          Length = 114

 Score = 79.0 bits (186), Expect = 9e-15
 Identities = 35/81 (43%), Positives = 53/81 (65%)
 Frame = +1

Query: 7   QFXKEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTG 186
           +F +  I+  KVV+  K+ CP   +AK+ F+K+     +IEL+   DGN  Q  L ++TG
Sbjct: 21  KFVENTIASNKVVIFSKTYCPYCTMAKEPFKKLNVDATIIELDGNPDGNEIQAVLGEITG 80

Query: 187 FRTVPQVFINGNCVGGGSDVK 249
            RTVP+VFI+G  +GGG+D+K
Sbjct: 81  ARTVPRVFIDGKFIGGGTDIK 101


>AE014296-3069|AAF49222.1|  114|Drosophila melanogaster CG6852-PA
           protein.
          Length = 114

 Score = 79.0 bits (186), Expect = 9e-15
 Identities = 35/81 (43%), Positives = 53/81 (65%)
 Frame = +1

Query: 7   QFXKEAISXXKVVVXXKSXCPXXKLAKDVFEKVKQPIKVIELNERDDGNTXQXNLAQLTG 186
           +F +  I+  KVV+  K+ CP   +AK+ F+K+     +IEL+   DGN  Q  L ++TG
Sbjct: 21  KFVENTIASNKVVIFSKTYCPYCTMAKEPFKKLNVDATIIELDGNPDGNEIQAVLGEITG 80

Query: 187 FRTVPQVFINGNCVGGGSDVK 249
            RTVP+VFI+G  +GGG+D+K
Sbjct: 81  ARTVPRVFIDGKFIGGGTDIK 101


>AY075095-1|AAL79357.1|  815|Drosophila melanogaster pygopus
           protein.
          Length = 815

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = -3

Query: 965 PXVXPAPXXTXPASPXXLPXPXSSXGTGXVXGKLTPNCRSLXXXQVXGXGPPPGXGXXPV 786
           P   P+P  + PA P       S+   G + G++ PN   +   Q  G G PPG G  P+
Sbjct: 501 PNSGPSPLQS-PAGPNGPNNNNSNNNNGPMMGQMIPNAVPMQHQQHMGGG-PPGHGPGPM 558


>AY058500-1|AAL13729.1|  815|Drosophila melanogaster LD18280p
           protein.
          Length = 815

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = -3

Query: 965 PXVXPAPXXTXPASPXXLPXPXSSXGTGXVXGKLTPNCRSLXXXQVXGXGPPPGXGXXPV 786
           P   P+P  + PA P       S+   G + G++ PN   +   Q  G G PPG G  P+
Sbjct: 501 PNSGPSPLQS-PAGPNGPNNNNSNNNNGPMMGQMIPNAVPMQHQQHMGGG-PPGHGPGPM 558


>AF457206-1|AAL91369.1|  815|Drosophila melanogaster pygopus
           protein.
          Length = 815

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = -3

Query: 965 PXVXPAPXXTXPASPXXLPXPXSSXGTGXVXGKLTPNCRSLXXXQVXGXGPPPGXGXXPV 786
           P   P+P  + PA P       S+   G + G++ PN   +   Q  G G PPG G  P+
Sbjct: 501 PNSGPSPLQS-PAGPNGPNNNNSNNNNGPMMGQMIPNAVPMQHQQHMGGG-PPGHGPGPM 558


>AE014297-4758|AAF57161.1|  815|Drosophila melanogaster CG11518-PA
           protein.
          Length = 815

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 19/60 (31%), Positives = 27/60 (45%)
 Frame = -3

Query: 965 PXVXPAPXXTXPASPXXLPXPXSSXGTGXVXGKLTPNCRSLXXXQVXGXGPPPGXGXXPV 786
           P   P+P  + PA P       S+   G + G++ PN   +   Q  G G PPG G  P+
Sbjct: 501 PNSGPSPLQS-PAGPNGPNNNNSNNNNGPMMGQMIPNAVPMQHQQHMGGG-PPGHGPGPM 558


>AY084192-1|AAL89930.1|  159|Drosophila melanogaster RH03087p
           protein.
          Length = 159

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1

Query: 181 TGFRTVPQVFINGNCVGG 234
           T + T+PQVFING  VGG
Sbjct: 102 TDWPTIPQVFINGEFVGG 119


>AE014298-2060|AAF48392.2|  159|Drosophila melanogaster CG14407-PA
           protein.
          Length = 159

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = +1

Query: 181 TGFRTVPQVFINGNCVGG 234
           T + T+PQVFING  VGG
Sbjct: 102 TDWPTIPQVFINGEFVGG 119


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,878,822
Number of Sequences: 53049
Number of extensions: 439070
Number of successful extensions: 702
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 700
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4976446329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)