Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0073
         (715 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    54   4e-07
DQ486153-1|ABF22698.1|  609|Homo sapiens transposase-like protei...    31   4.1  
BC033903-1|AAH33903.1|  975|Homo sapiens ZMYM6 protein protein.        31   4.1  
BC017791-1|AAH17791.1|  292|Homo sapiens Unknown (protein for IM...    31   4.1  
AL607089-1|CAI12897.1| 1325|Homo sapiens zinc finger, MYM-type 6...    31   4.1  
AK000927-1|BAA91430.1|  607|Homo sapiens protein ( Homo sapiens ...    31   4.1  
AB037774-1|BAA92591.1|  640|Homo sapiens KIAA1353 protein protein.     31   4.1  
X04701-1|CAA28407.1|  705|Homo sapiens protein ( Human mRNA for ...    30   7.2  
M14058-1|AAA51851.1|  705|Homo sapiens C1R protein.                    30   7.2  
BC035220-1|AAH35220.1|  705|Homo sapiens complement component 1,...    30   7.2  
AB083037-1|BAC19850.2|  705|Homo sapiens r subcomponent of compl...    30   7.2  
X62822-1|CAA44634.1|  406|Homo sapiens beta-galactoside  alpha-2...    30   9.5  
X54363-1|CAA38246.1|  405|Homo sapiens B cell antigen CD75 protein.    30   9.5  
X17247-1|CAA35111.1|  406|Homo sapiens protein ( Human mRNA for ...    30   9.5  
BC040009-1|AAH40009.1|  406|Homo sapiens ST6 beta-galactosamide ...    30   9.5  
BC031476-1|AAH31476.1|  406|Homo sapiens ST6 beta-galactosamide ...    30   9.5  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 54.4 bits (125), Expect = 4e-07
 Identities = 23/31 (74%), Positives = 25/31 (80%)
 Frame = +1

Query: 55  VHPSKGNVAMNAWLPQASYPCGNFSGTSC*K 147
           +  SK +VAMNAW PQASYPCGNFS TSC K
Sbjct: 7   IEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>DQ486153-1|ABF22698.1|  609|Homo sapiens transposase-like protein
           protein.
          Length = 609

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +3

Query: 486 VVVFQRRSAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR 647
           ++ FQ  ++K+  + A  L+ PY   + S   GSS   D  K +PL+ V++  R
Sbjct: 118 LIAFQTAASKKPFSIAEELIKPYLVEMCSEVLGSS-AGDKMKTIPLSNVTIQHR 170


>BC033903-1|AAH33903.1|  975|Homo sapiens ZMYM6 protein protein.
          Length = 975

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +3

Query: 486 VVVFQRRSAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR 647
           ++ FQ  ++K+  + A  L+ PY   + S   GSS   D  K +PL+ V++  R
Sbjct: 834 LIAFQTAASKKPFSIAEELIKPYLVEMCSEVLGSS-AGDKMKTIPLSNVTIQHR 886


>BC017791-1|AAH17791.1|  292|Homo sapiens Unknown (protein for
           IMAGE:4271506) protein.
          Length = 292

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +3

Query: 486 VVVFQRRSAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR 647
           ++ FQ  ++K+  + A  L+ PY   + S   GSS   D  K +PL+ V++  R
Sbjct: 147 LIAFQTAASKKPFSIAEELIKPYLVEMCSEVLGSS-AGDKMKTIPLSNVTIQHR 199


>AL607089-1|CAI12897.1| 1325|Homo sapiens zinc finger, MYM-type 6
           protein.
          Length = 1325

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +3

Query: 486 VVVFQRRSAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR 647
           ++ FQ  ++K+  + A  L+ PY   + S   GSS   D  K +PL+ V++  R
Sbjct: 834 LIAFQTAASKKPFSIAEELIKPYLVEMCSEVLGSS-AGDKMKTIPLSNVTIQHR 886


>AK000927-1|BAA91430.1|  607|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10065 fis, clone HEMBA1001455. ).
          Length = 607

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +3

Query: 486 VVVFQRRSAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR 647
           ++ FQ  ++K+  + A  L+ PY   + S   GSS   D  K +PL+ V++  R
Sbjct: 116 LIAFQTAASKKPFSIAEELIKPYLVEMCSEVLGSS-AGDKMKTIPLSNVTIQHR 168


>AB037774-1|BAA92591.1|  640|Homo sapiens KIAA1353 protein protein.
          Length = 640

 Score = 31.1 bits (67), Expect = 4.1
 Identities = 17/54 (31%), Positives = 29/54 (53%)
 Frame = +3

Query: 486 VVVFQRRSAKRSPTYATPLMSPYNARLESSSTGSSFPADSPKPVPLAVVSLDSR 647
           ++ FQ  ++K+  + A  L+ PY   + S   GSS   D  K +PL+ V++  R
Sbjct: 149 LIAFQTAASKKPFSIAEELIKPYLVEMCSEVLGSS-AGDKMKTIPLSNVTIQHR 201


>X04701-1|CAA28407.1|  705|Homo sapiens protein ( Human mRNA for
           complement component C1r. ).
          Length = 705

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 673 D*RDSHCPYLLSSETTAKGTGLGESAGKDDPVELDSS 563
           D +  HCPY    +  A G  +GE  GK  P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>M14058-1|AAA51851.1|  705|Homo sapiens C1R protein.
          Length = 705

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 673 D*RDSHCPYLLSSETTAKGTGLGESAGKDDPVELDSS 563
           D +  HCPY    +  A G  +GE  GK  P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>BC035220-1|AAH35220.1|  705|Homo sapiens complement component 1, r
           subcomponent protein.
          Length = 705

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 673 D*RDSHCPYLLSSETTAKGTGLGESAGKDDPVELDSS 563
           D +  HCPY    +  A G  +GE  GK  P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>AB083037-1|BAC19850.2|  705|Homo sapiens r subcomponent of
           complement component 1 protein.
          Length = 705

 Score = 30.3 bits (65), Expect = 7.2
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = -1

Query: 673 D*RDSHCPYLLSSETTAKGTGLGESAGKDDPVELDSS 563
           D +  HCPY    +  A G  +GE  GK  P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>X62822-1|CAA44634.1|  406|Homo sapiens beta-galactoside
           alpha-2,6-sialyltransferase protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 114 GITGLWQPSV-HSDVPF*WVNNPTLGEFFRNDRKSR 10
           GI  +W PSV HSD+P  W  NP    FF N +  R
Sbjct: 252 GILIVWDPSVYHSDIPK-WYQNPDY-NFFNNYKTYR 285


>X54363-1|CAA38246.1|  405|Homo sapiens B cell antigen CD75 protein.
          Length = 405

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 114 GITGLWQPSV-HSDVPF*WVNNPTLGEFFRNDRKSR 10
           GI  +W PSV HSD+P  W  NP    FF N +  R
Sbjct: 251 GILIVWDPSVYHSDIPK-WYQNPDY-NFFNNYKTYR 284


>X17247-1|CAA35111.1|  406|Homo sapiens protein ( Human mRNA for
           sialyltransferase (CMP-N-acetylneuraminate-beta-
           galactoside alpha-2,6-sialyltransferase) (EC 2.4.99.1). 
           ).
          Length = 406

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 114 GITGLWQPSV-HSDVPF*WVNNPTLGEFFRNDRKSR 10
           GI  +W PSV HSD+P  W  NP    FF N +  R
Sbjct: 252 GILIVWDPSVYHSDIPK-WYQNPDY-NFFNNYKTYR 285


>BC040009-1|AAH40009.1|  406|Homo sapiens ST6 beta-galactosamide
           alpha-2,6-sialyltranferase 1 protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 114 GITGLWQPSV-HSDVPF*WVNNPTLGEFFRNDRKSR 10
           GI  +W PSV HSD+P  W  NP    FF N +  R
Sbjct: 252 GILIVWDPSVYHSDIPK-WYQNPDY-NFFNNYKTYR 285


>BC031476-1|AAH31476.1|  406|Homo sapiens ST6 beta-galactosamide
           alpha-2,6-sialyltranferase 1 protein.
          Length = 406

 Score = 29.9 bits (64), Expect = 9.5
 Identities = 17/36 (47%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
 Frame = -2

Query: 114 GITGLWQPSV-HSDVPF*WVNNPTLGEFFRNDRKSR 10
           GI  +W PSV HSD+P  W  NP    FF N +  R
Sbjct: 252 GILIVWDPSVYHSDIPK-WYQNPDY-NFFNNYKTYR 285


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,501,748
Number of Sequences: 237096
Number of extensions: 2420545
Number of successful extensions: 5205
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5197
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8343197486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)