Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0073
         (715 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    24   1.2  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   5.0  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   5.0  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    22   5.0  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   8.8  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    21   8.8  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   8.8  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 14/49 (28%), Positives = 20/49 (40%)
 Frame = -2

Query: 324 GGEFDWGGTSVKE*RRCPKASSARQKPRVEQKGKSWLDPDVQYA*GLRK 178
           GG+ DW   +  E   C     +   PR +  G + L   + Y  G RK
Sbjct: 119 GGDLDWKYYTTNESHACLSTGGSCYWPRGKNLGGTTLHHGMAYHRGHRK 167


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = -3

Query: 506 SSLKNHYFHCFITYSVGRK 450
           SS    +FHC+     GRK
Sbjct: 420 SSFFQQFFHCYCPVRFGRK 438


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 523 PLMLHLSCLLTMPD*S---QAQQGHPSPLILPSP 615
           P+++H+      PD     QA  GH S L LP+P
Sbjct: 18  PMVVHVYHPYRQPDGMNQCQAVNGHCSHLCLPAP 51


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
 Frame = +1

Query: 523 PLMLHLSCLLTMPD*S---QAQQGHPSPLILPSP 615
           P+++H+      PD     QA  GH S L LP+P
Sbjct: 18  PMVVHVYHPYRQPDGMNQCQAVNGHCSHLCLPAP 51


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 295 RCTAPVKLPAWQCPLSESR 351
           R  AP K+PAW   LS ++
Sbjct: 62  RFKAPQKIPAWIGELSATK 80


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +1

Query: 277 PALFFDRCTAPVKLPAWQCPLSESRGXL 360
           PA+ + R     ++P  +CP +E  G L
Sbjct: 180 PAIVWWRAVRTEEVPEDKCPFTEHLGYL 207


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 531 ATPLMSPYNARLESSSTGSSFP 596
           A  + SP   +   SSTGSS P
Sbjct: 347 AKQMASPEPPKSSESSTGSSIP 368


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 295 RCTAPVKLPAWQCPLSESR 351
           R  AP K+PAW   LS ++
Sbjct: 62  RFKAPQKIPAWIGELSATK 80


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,839
Number of Sequences: 438
Number of extensions: 4307
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)