Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0072
         (827 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    25   3.8  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   3.8  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    23   8.7  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    23   8.7  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
 Frame = -2

Query: 772 YCESIGKTQHEFERHIIARHTTD--FECFKRQYKSLKDNALLR 650
           +C++   T  E  RHI  RHT +   +C +  Y S++ + L R
Sbjct: 187 HCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKR 229


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 9/13 (69%), Positives = 13/13 (100%)
 Frame = -3

Query: 744 MNSNATLLPATQP 706
           ++SNAT++PATQP
Sbjct: 954 VSSNATVVPATQP 966


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +2

Query: 707  GCVAGNNVAFEFMLSFSN*FTVLMINI 787
            GC  G+N+AF + +SF    + L+IN+
Sbjct: 1395 GC--GSNIAFPYFISFYVLCSFLIINL 1419


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = -2

Query: 127  ARPYWSIPTKEIP 89
            ARPY ++P K++P
Sbjct: 1034 ARPYENVPAKDVP 1046


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 859,101
Number of Sequences: 2352
Number of extensions: 17778
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)