Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0070
(774 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30216| Best HMM Match : TIL (HMM E-Value=3.1) 72 5e-13
SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2) 51 9e-07
SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 9e-07
SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 4e-06
SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59) 48 1e-05
SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 1e-05
SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1) 43 3e-04
SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.021
SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_41657| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 29 4.2
SB_36629| Best HMM Match : Fer2 (HMM E-Value=0.0041) 29 5.5
SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_49641| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.3
>SB_30216| Best HMM Match : TIL (HMM E-Value=3.1)
Length = 212
Score = 72.1 bits (169), Expect = 5e-13
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 607 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
TAGRWPWK ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 1 TAGRWPWKLESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_14965| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 295
Score = 72.1 bits (169), Expect = 5e-13
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 607 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
TAGRWPWK ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 1 TAGRWPWKLESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_6863| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 182
Score = 72.1 bits (169), Expect = 5e-13
Identities = 32/40 (80%), Positives = 33/40 (82%)
Frame = +1
Query: 607 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
TAGRWPWK ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 80 TAGRWPWKLESAKECVTTHLPKQLALKMDGAQASHLYRAV 119
>SB_27787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 56.8 bits (131), Expect = 2e-08
Identities = 28/40 (70%), Positives = 30/40 (75%)
Frame = +1
Query: 607 TAGRWPWKSESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
TAGR + ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 1 TAGRVAMEVESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_53289| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 100
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +1
Query: 628 KSESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
K ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 9 KLESAKECVTTHLPKQLALKMDGAQASHLYRAV 41
>SB_49224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +1
Query: 628 KSESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
K ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 2 KLESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_27353| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/33 (75%), Positives = 26/33 (78%)
Frame = +1
Query: 628 KSESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
K ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 2 KLESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_58055| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 634 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_54389| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 634 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_51835| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 634 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_48809| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 634 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_41857| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 634 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_40886| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 634 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_40435| Best HMM Match : DUF1677 (HMM E-Value=4.2)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 634 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_9214| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 634 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_5959| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 634 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_3984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 634 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 4 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_47626| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 99
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/31 (77%), Positives = 25/31 (80%)
Frame = +1
Query: 634 ESAKECATTHLPKQPALKMDGAEAFCLYTTV 726
ESAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 10 ESAKECVTTHLPKQLALKMDGAQASHLYRAV 40
>SB_55300| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +1
Query: 637 SAKECATTHLPKQPALKMDGAEAFCLYTTV 726
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_53216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +1
Query: 637 SAKECATTHLPKQPALKMDGAEAFCLYTTV 726
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_24856| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +1
Query: 637 SAKECATTHLPKQPALKMDGAEAFCLYTTV 726
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_16637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 93
Score = 49.2 bits (112), Expect = 4e-06
Identities = 23/30 (76%), Positives = 24/30 (80%)
Frame = +1
Query: 637 SAKECATTHLPKQPALKMDGAEAFCLYTTV 726
SAKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 5 SAKECVTTHLPKQLALKMDGAQASHLYRAV 34
>SB_35257| Best HMM Match : Sec8_exocyst (HMM E-Value=0.59)
Length = 1060
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +2
Query: 551 VKAPKKRSWDTMKGVGRS*QQDGGHGSRNPLRSVQRL 661
++ +RS D KGVG S QQDGGHGS NPLR QRL
Sbjct: 9 LRCQSRRSSDPTKGVGCSRQQDGGHGSWNPLRKGQRL 45
>SB_49647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 126
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/29 (75%), Positives = 23/29 (79%)
Frame = +1
Query: 640 AKECATTHLPKQPALKMDGAEAFCLYTTV 726
AKEC TTHLPKQ ALKMDGA+A LY V
Sbjct: 39 AKECVTTHLPKQLALKMDGAQASHLYRAV 67
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = +2
Query: 551 VKAPKKRSWDTMKGVGRS*QQDGGHGSRNPLR 646
++ +RS D KGVG S QQDGGHGS NP +
Sbjct: 9 LRCQSRRSSDPTKGVGCSRQQDGGHGSWNPAK 40
>SB_13467| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/29 (68%), Positives = 21/29 (72%)
Frame = -1
Query: 246 NRYGPPSGFPLTST*PGIVHHLSGPSICA 160
NRY PP FPL S GIVHHLSGP+ CA
Sbjct: 1 NRYEPPPEFPLASPYSGIVHHLSGPNRCA 29
>SB_20402| Best HMM Match : Transformer (HMM E-Value=2.1)
Length = 276
Score = 42.7 bits (96), Expect = 3e-04
Identities = 23/41 (56%), Positives = 27/41 (65%)
Frame = -3
Query: 544 FGSSHSASSAYQIGPLGTVIRSPASSFE*AGVLTHLKFENR 422
FGSS ASS YQ GP T I P + + G+LT+LKFENR
Sbjct: 78 FGSSRIASSGYQNGPTRTRIHCPGFNKQ-VGLLTNLKFENR 117
>SB_7775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 42.7 bits (96), Expect = 3e-04
Identities = 21/30 (70%), Positives = 23/30 (76%)
Frame = -3
Query: 247 ESLRSSIRVSPDFDLTRHSSPSFGSQHLCS 158
ESLR+S RVS F L RHSSPSFGSQ + S
Sbjct: 35 ESLRASTRVSSGFTLFRHSSPSFGSQQMRS 64
>SB_6844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 54
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/29 (72%), Positives = 21/29 (72%)
Frame = -3
Query: 556 LNTTFGSSHSASSAYQIGPLGTVIRSPAS 470
LN FGSS ASSAYQ GPLGT I PAS
Sbjct: 17 LNRAFGSSRIASSAYQNGPLGTRIHCPAS 45
>SB_5602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 41.9 bits (94), Expect = 6e-04
Identities = 19/32 (59%), Positives = 23/32 (71%)
Frame = +2
Query: 551 VKAPKKRSWDTMKGVGRS*QQDGGHGSRNPLR 646
++ +RS D KGVG S QQDGGHGS NPL+
Sbjct: 9 LRCQSRRSSDPTKGVGCSRQQDGGHGSWNPLK 40
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/28 (71%), Positives = 21/28 (75%)
Frame = +1
Query: 643 KECATTHLPKQPALKMDGAEAFCLYTTV 726
KEC TT LPKQ ALKMDGA+A LY V
Sbjct: 40 KECVTTPLPKQLALKMDGAQASHLYRAV 67
>SB_29359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 33
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/25 (80%), Positives = 21/25 (84%)
Frame = +3
Query: 567 NAHGTP*KALVAHDSRTVAMEVGIR 641
+AH TP K LVA DSRTVAMEVGIR
Sbjct: 9 DAHQTPQKVLVALDSRTVAMEVGIR 33
>SB_24059| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 42
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 628 KSESAKECATTHLPKQPALKM 690
K ESAKEC TTHLPKQ ALKM
Sbjct: 2 KVESAKECVTTHLPKQLALKM 22
>SB_52007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 36.7 bits (81), Expect = 0.021
Identities = 32/72 (44%), Positives = 34/72 (47%)
Frame = -3
Query: 715 IGKTLQRHPFSGLVASAGESLHTP*RIPTSMATVLLS*ATNAFHGVP*AFFRRLNTTFGS 536
IG TL+RHPFSGLVASA + PT F G LN FGS
Sbjct: 24 IGATLERHPFSGLVASAEQ--------PT------------PFVGSDERRLWHLNRAFGS 63
Query: 535 SHSASSAYQIGP 500
S ASSAYQ P
Sbjct: 64 SRIASSAYQKWP 75
>SB_9493| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 84
Score = 36.7 bits (81), Expect = 0.021
Identities = 32/72 (44%), Positives = 34/72 (47%)
Frame = -3
Query: 715 IGKTLQRHPFSGLVASAGESLHTP*RIPTSMATVLLS*ATNAFHGVP*AFFRRLNTTFGS 536
IG TL+RHPFSGLVASA + PT F G LN FGS
Sbjct: 22 IGATLERHPFSGLVASAEQ--------PT------------PFVGSDERRLWHLNRAFGS 61
Query: 535 SHSASSAYQIGP 500
S ASSAYQ P
Sbjct: 62 SRIASSAYQKWP 73
>SB_44604| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 33.1 bits (72), Expect = 0.26
Identities = 14/21 (66%), Positives = 14/21 (66%)
Frame = -1
Query: 246 NRYGPPSGFPLTST*PGIVHH 184
NRY PP FPL S GIVHH
Sbjct: 1 NRYEPPPEFPLASPYSGIVHH 21
>SB_40592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 46
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/19 (73%), Positives = 14/19 (73%)
Frame = -3
Query: 556 LNTTFGSSHSASSAYQIGP 500
LN FGSS ASSAYQ GP
Sbjct: 17 LNRAFGSSRIASSAYQKGP 35
>SB_41657| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 29.1 bits (62), Expect = 4.2
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Frame = -1
Query: 609 CHERPTPFMVSHERFLGALTLRLVHPTAPVLLTKLAH---LAPSSDLRLHRSSKPEFSPI 439
CH+R P +V LGAL LR+ A + AH AP L+ + K + S +
Sbjct: 243 CHKRDVPVLVDGAHALGALPLRIAELGADYYVAN-AHKWLCAPKGCAALYVADKHKGS-V 300
Query: 438 *SLRIG*GRFGPNASNHSLYRMRLF*NFISTPAI 337
L + G FG + L+R+ F +S I
Sbjct: 301 RCLTVS-GGFGRGFTTEFLFRVLDFWETVSPDRI 333
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -2
Query: 659 VVAHSLADSDFHGHRPAVMSDQRLSWCPMSVF 564
+ H + ++DF G R A+M+D +L C S+F
Sbjct: 386 LTTHFMDEADFLGDRIAIMADGQLRCCGSSLF 417
>SB_36629| Best HMM Match : Fer2 (HMM E-Value=0.0041)
Length = 128
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Frame = +3
Query: 114 LPRRLVSNQ*MKARSEHKC----WDPKDGELCLVRSKSGETLMEDRSDSDV 254
L RR VSN + +++H+ + +DG+ V++K G++L++ D+DV
Sbjct: 29 LARRYVSNGKEQTKAKHETVSITFVDRDGDRQTVKAKVGDSLLDVAKDNDV 79
>SB_19053| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 506 WPTWHRHQISGFIVRVSRSSHPFKV 432
WPT + H +SGF SR+S+ FKV
Sbjct: 34 WPTRNSHSLSGFNY-ASRTSYQFKV 57
>SB_49641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 755
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Frame = -1
Query: 657 RCTLLSGFRLPWPPSCCHERPTPFMVSHE-RFLGALTLRLVHPTAPVLLTKL-AHLAPSS 484
+C L P PT + ++ RF +T+ L+HP +PV+ ++ A +
Sbjct: 183 KCGLCGSTPTPTEKPSSPSLPTTKVTKNDARFCSEITVLLLHPLSPVIRSRSDARIVIFE 242
Query: 483 DLRLH 469
D+++H
Sbjct: 243 DVKMH 247
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,552,721
Number of Sequences: 59808
Number of extensions: 544955
Number of successful extensions: 1248
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1247
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2107953584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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