Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0066
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 29 2.6
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 29 4.6
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 29 4.6
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z66513-3|CAA91331.1| 186|Caenorhabditis elegans Hypothetical pr... 28 8.1
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +1
Query: 97 DPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRQIPRMVAS 276
+ GL R + + ET +K H P S +V + R A A F Q PR+
Sbjct: 789 ESRGLHRHEEKAQIETSTIKIH---EPSSPPPSVHKFGAVNTRAAPAPVQFMQTPRIAVK 845
Query: 277 HHRPLG 294
H P G
Sbjct: 846 IHEPTG 851
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = +1
Query: 97 DPNGLRRRVSRFECETRLVKSHCLEPPDSRGSTVSISLPDSARLASALEAFRQIPRMVAS 276
+ GL R + + ET +K H P S +V + R A A F Q PR+
Sbjct: 789 ESRGLHRHEEKAQIETSTIKIH---EPSSPPPSVHKFGAVNTRAAPAPVQFMQTPRIAVK 845
Query: 277 HHRPLG 294
H P G
Sbjct: 846 IHEPTG 851
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3
Query: 567 SARKVTTGITGL----WQPSVHSELLFDPSMSALPIIAKQNSPSV 445
S VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2251 STSSVTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3
Query: 567 SARKVTTGITGL----WQPSVHSELLFDPSMSALPIIAKQNSPSV 445
S VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2273 STSSVTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical protein
R11A8.7d protein.
Length = 1427
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3
Query: 567 SARKVTTGITGL----WQPSVHSELLFDPSMSALPIIAKQNSPSV 445
S VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 1094 STSSVTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1138
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical protein
R11A8.7c protein.
Length = 1405
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3
Query: 567 SARKVTTGITGL----WQPSVHSELLFDPSMSALPIIAKQNSPSV 445
S VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 1072 STSSVTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 1116
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3
Query: 567 SARKVTTGITGL----WQPSVHSELLFDPSMSALPIIAKQNSPSV 445
S VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2251 STSSVTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2295
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 28.7 bits (61), Expect = 4.6
Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Frame = -3
Query: 567 SARKVTTGITGL----WQPSVHSELLFDPSMSALPIIAKQNSPSV 445
S VTTG++ L W P+ + DP+ S P+ A+ S SV
Sbjct: 2273 STSSVTTGLSSLELKGWMPASFAPSARDPNRSQPPLFARSQSNSV 2317
>Z66513-3|CAA91331.1| 186|Caenorhabditis elegans Hypothetical
protein F54D5.4 protein.
Length = 186
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Frame = +1
Query: 142 TRL-VKSHCLEPPDSRGSTVSISLPD-SARLASALEAFRQIPRMVASHHRPLGRVHEPNV 315
TRL K +C E + G+ + D S + +E R+I ++A H R +PN
Sbjct: 44 TRLNTKYYCFEGCLNTGTALQNCKVDMSGNNGTRIERSREIKEVIALHQLARQRDEDPNA 103
Query: 316 RNC 324
++C
Sbjct: 104 KSC 106
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -1
Query: 185 RESGGSKQCDFTSRVSHSKRETRRRSPFGSRRPMLSVFFLTRASRLRRSGYNS 27
R S G++ TSR + +R + RSP SR P R R SG++S
Sbjct: 167 RGSRGARSSVGTSRQQYGRRMSFDRSPSPSRAPGRGSRISDRGGDYRDSGFSS 219
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,653,602
Number of Sequences: 27780
Number of extensions: 368430
Number of successful extensions: 950
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 950
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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