Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0064
         (706 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    24   1.0  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.2  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   5.6  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   5.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   9.8  

>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = -1

Query: 661 IACTSNAIKSSWLRFFLVKLIEILFWIFHNL 569
           I  T +  K +WL F    L  +LFW F  +
Sbjct: 232 IFITEHESKPNWLFFLANFLTNLLFWEFDQI 262


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -2

Query: 345 ISGKTSPSNSTTV*TKDP 292
           I  + SP+NSTT+ T+ P
Sbjct: 418 IPEEASPTNSTTITTQTP 435


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = -1

Query: 694 VAGIPVSCR*LIACTSNAIKS 632
           VAG   +CR +I CTS+ +++
Sbjct: 52  VAGEGDNCRDVIQCTSSGLQA 72


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +3

Query: 621 RSQEDLIALDVHAISHLQDTGIPA---TDD 701
           RS EDL+ALD   +S    + IP+   TDD
Sbjct: 112 RSLEDLLALDESTVSS-STSSIPSPSTTDD 140


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 467 FSNY*ASLLFCKVNFF 420
           F  + A+L++C V FF
Sbjct: 43  FCTFVAALVYCSVTFF 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,009
Number of Sequences: 336
Number of extensions: 3137
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)