Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0062
         (708 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73427-7|CAA97799.1|  371|Caenorhabditis elegans Hypothetical pr...    31   0.81 
AL034393-26|CAI59121.1|  936|Caenorhabditis elegans Hypothetical...    30   1.4  
AL034393-25|CAI59120.1|  797|Caenorhabditis elegans Hypothetical...    30   1.4  
AL034393-24|CAA22312.3|  833|Caenorhabditis elegans Hypothetical...    30   1.4  
Z81531-6|CAB04317.2|  330|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z81127-1|CAB03386.1|  325|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical pr...    28   5.7  
U14635-13|AAC46654.2|  322|Caenorhabditis elegans Hypothetical p...    27   9.9  

>Z73427-7|CAA97799.1|  371|Caenorhabditis elegans Hypothetical
           protein F58B3.7 protein.
          Length = 371

 Score = 31.1 bits (67), Expect = 0.81
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +1

Query: 280 PKTITASLNVRDFDWNVANEYDPMWPNDYEKVAKELQAKR 399
           PK  T    +   + +V  EY PM PN+YE VAKE+  ++
Sbjct: 94  PKAATDESVMLFGEEHVKCEYYPMTPNNYEVVAKEINDRK 133


>AL034393-26|CAI59121.1|  936|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7c protein.
          Length = 936

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 322 WNVANEYDPMWPNDYEKV 375
           WN+A+EYD MWP   + +
Sbjct: 750 WNIADEYDIMWPQTMQDI 767


>AL034393-25|CAI59120.1|  797|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7b protein.
          Length = 797

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 322 WNVANEYDPMWPNDYEKV 375
           WN+A+EYD MWP   + +
Sbjct: 734 WNIADEYDIMWPQTMQDI 751


>AL034393-24|CAA22312.3|  833|Caenorhabditis elegans Hypothetical
           protein Y18D10A.7a protein.
          Length = 833

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +1

Query: 322 WNVANEYDPMWPNDYEKV 375
           WN+A+EYD MWP   + +
Sbjct: 750 WNIADEYDIMWPQTMQDI 767


>Z81531-6|CAB04317.2|  330|Caenorhabditis elegans Hypothetical
           protein F36D3.6 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = +3

Query: 129 YSHSYN*KKQQLHNLNEKPCVVP 197
           YS S+N ++Q+L+ L E PC+ P
Sbjct: 156 YSDSFNYEEQRLYILKEYPCIPP 178


>Z81127-1|CAB03386.1|  325|Caenorhabditis elegans Hypothetical
           protein T22G5.1 protein.
          Length = 325

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +1

Query: 283 KTITASLNVRDFDWNVANEYDPMWPNDYEKV 375
           KT  A+ N+    W   N+Y+ +W  DY KV
Sbjct: 283 KTDAAANNIYLAGWTSNNQYEQVWLRDYLKV 313


>Z68314-7|CAA92662.2|  872|Caenorhabditis elegans Hypothetical
           protein F07H5.8 protein.
          Length = 872

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -1

Query: 207 STCVERRKASRLGCVTAAFFSCNCDCSNLIPEDHAATFSV 88
           ++CV++   S   C TA   SC   C  ++ E    TF +
Sbjct: 750 TSCVQQNSQSVPQCSTACTDSCRSSCVEIVKESAEPTFKL 789


>U14635-13|AAC46654.2|  322|Caenorhabditis elegans Hypothetical
           protein C27H5.6 protein.
          Length = 322

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 614 ASNRISWVLHRWLWR 658
           A NR+SW   RW WR
Sbjct: 121 AVNRVSWYRSRWTWR 135


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,691,487
Number of Sequences: 27780
Number of extensions: 228552
Number of successful extensions: 618
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 605
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 618
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1645110168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)