Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0061
         (416 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   0.90 
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   2.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   2.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   3.6  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   4.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   6.4  

>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.4 bits (48), Expect = 0.90
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 280 FIIIFALISFKYDNFKG*FYFYLIL 354
           FI+ FA IS  Y N     +FY  L
Sbjct: 169 FILAFACISIAYTNVSTDAFFYTCL 193


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -3

Query: 342 EIKSTFKIIIFKGNQCKNNNKYSRDEPT*IYINLENIYHVEYK 214
           +IKS    +IF   + +       DE T     ++ + H+ YK
Sbjct: 224 QIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYK 266


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.2 bits (45), Expect = 2.1
 Identities = 11/43 (25%), Positives = 19/43 (44%)
 Frame = -3

Query: 342 EIKSTFKIIIFKGNQCKNNNKYSRDEPT*IYINLENIYHVEYK 214
           +IKS    +IF   + +       DE T     ++ + H+ YK
Sbjct: 180 QIKSVDLFVIFPLTKAEKVRNLKEDEVTFSVQKIQELSHLHYK 222


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 3.6
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 246 LYRFMLVHLVSIYYYFC 296
           ++   L+ L+ IYY++C
Sbjct: 274 IFTMHLLFLLCIYYFYC 290



 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = +3

Query: 255 FMLVHLVSIYYYFCI 299
           F   +L  IYY++C+
Sbjct: 48  FKCYNLRRIYYFYCV 62



 Score = 20.2 bits (40), Expect = 8.4
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +3

Query: 246 LYRFMLVHLVSIYYYFC 296
           ++   L+ L+ IY++FC
Sbjct: 155 IFTVHLLFLLCIYHFFC 171


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.0 bits (42), Expect = 4.8
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -3

Query: 234 IYHVEYKNI 208
           IY+VEYKN+
Sbjct: 325 IYNVEYKNV 333


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 6.4
 Identities = 9/30 (30%), Positives = 12/30 (40%)
 Frame = +3

Query: 207 LYSYIQHGKYFQGLYRFMLVHLVSIYYYFC 296
           LY       YF  L +   +H     Y+FC
Sbjct: 319 LYMAFMDRLYFSNLDKDAFIHRTVDDYFFC 348


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,010
Number of Sequences: 336
Number of extensions: 1098
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9174063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)