Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0058
(357 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein. 31 1.0
AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type ... 31 1.0
U97698-1|AAC51370.1| 421|Homo sapiens secretory mucin MUC6 prot... 29 5.6
BC016757-1|AAH16757.1| 220|Homo sapiens Sin3A-associated protei... 29 5.6
AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein. 29 5.6
AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein. 29 5.6
AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens ... 29 5.6
AK092533-1|BAC03911.1| 325|Homo sapiens protein ( Homo sapiens ... 29 5.6
AF055993-1|AAC33316.1| 220|Homo sapiens mSin3A associated polyp... 29 5.6
EF623992-1|ABR25252.1| 354|Homo sapiens Uba6-specific E2 conjug... 28 7.4
Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein. 28 9.8
BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB dom... 28 9.8
BC117276-1|AAI17277.1| 420|Homo sapiens reticulon 4 receptor-li... 28 9.8
BC113673-1|AAI13674.1| 420|Homo sapiens reticulon 4 receptor-li... 28 9.8
AY250221-1|AAP82838.1| 420|Homo sapiens nogo receptor-like 3 pr... 28 9.8
AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB dom... 28 9.8
AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB dom... 28 9.8
AF532858-1|AAP21835.1| 420|Homo sapiens Nogo-66 receptor homolo... 28 9.8
>BC048251-1|AAH48251.1| 322|Homo sapiens ZDHHC12 protein protein.
Length = 322
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 317 SDIWFMHYGR-AAGGAKLPSAGYA*TPLRPKPA*PNPARICSLWSPESRE 171
S W H A G P++ TP P P P PA +CS SPE R+
Sbjct: 45 SHSWNQHLQAFAQPGTHFPTSNC--TPTPPTPVLPGPASLCSPASPELRQ 92
>AL441992-6|CAI15406.1| 210|Homo sapiens zinc finger, DHHC-type
containing 12 protein.
Length = 210
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = -2
Query: 317 SDIWFMHYGR-AAGGAKLPSAGYA*TPLRPKPA*PNPARICSLWSPESRE 171
S W H A G P++ TP P P P PA +CS SPE R+
Sbjct: 45 SHSWNQHLQAFAQPGTHFPTSNC--TPTPPTPVLPGPASLCSPASPELRQ 92
>U97698-1|AAC51370.1| 421|Homo sapiens secretory mucin MUC6
protein.
Length = 421
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 188 STVSISLPDSARLASALEAFRHIPRMVASHH 280
STV++S S+ LAS+ AF PR AS H
Sbjct: 211 STVTVSPTPSSHLASSTIAFPSTPRTTASTH 241
>BC016757-1|AAH16757.1| 220|Homo sapiens Sin3A-associated protein,
30kDa protein.
Length = 220
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -2
Query: 293 GRAAG-GAKLPSAGYA*TPLRPKPA*PNPARICSLWSPESR--EALNNVTLLVAFRIQNA 123
G AG GA++P AG P A P P ++C L R A N + + +
Sbjct: 35 GTGAGTGAEVPGAGAVSAAGPPGAAGPGPGQLCCLREDGERCGRAAGNASFSKRIQKSIS 94
Query: 122 RRDVEAHLDRGDR 84
++ V+ LD+ R
Sbjct: 95 QKKVKIELDKSAR 107
>AY750848-1|AAU81930.1| 1032|Homo sapiens RTN3-A1 protein.
Length = 1032
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Frame = -1
Query: 273 EATIRGICLNASKAEASLAESGKDMLTVEP------RESGGSKQCDFTSRVSHSKRETRR 112
E +GI + A +++E D T P ESGGS+ D S+ S +ET
Sbjct: 660 ETRDKGIVDSERNAFKAISEKMTDFKTTPPVEVLHENESGGSEIKDIGSKYSEQSKETNG 719
Query: 111 RSPFG 97
P G
Sbjct: 720 SEPLG 724
>AY427821-1|AAR02474.1| 1013|Homo sapiens reticulon 3-A protein.
Length = 1013
Score = 28.7 bits (61), Expect = 5.6
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Frame = -1
Query: 273 EATIRGICLNASKAEASLAESGKDMLTVEP------RESGGSKQCDFTSRVSHSKRETRR 112
E +GI + A +++E D T P ESGGS+ D S+ S +ET
Sbjct: 641 ETRDKGIVDSERNAFKAISEKMTDFKTTPPVEVLHENESGGSEIKDIGSKYSEQSKETNG 700
Query: 111 RSPFG 97
P G
Sbjct: 701 SEPLG 705
>AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ39453 fis, clone PROST2010046, highly similar to
Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
Length = 577
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 188 STVSISLPDSARLASALEAFRHIPRMVASHH 280
STV++S S+ LAS+ AF PR AS H
Sbjct: 367 STVTVSPTPSSHLASSTIAFPSTPRTTASTH 397
>AK092533-1|BAC03911.1| 325|Homo sapiens protein ( Homo sapiens
cDNA FLJ35214 fis, clone PROST1000512, highly similar to
Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
Length = 325
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/31 (48%), Positives = 19/31 (61%)
Frame = +2
Query: 188 STVSISLPDSARLASALEAFRHIPRMVASHH 280
STV++S S+ LAS+ AF PR AS H
Sbjct: 198 STVTVSPTPSSHLASSTIAFPSTPRTTASTH 228
>AF055993-1|AAC33316.1| 220|Homo sapiens mSin3A associated
polypeptide p30 protein.
Length = 220
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = -2
Query: 293 GRAAG-GAKLPSAGYA*TPLRPKPA*PNPARICSLWSPESR--EALNNVTLLVAFRIQNA 123
G AG GA++P AG P A P P ++C L R A N + + +
Sbjct: 35 GTGAGTGAEVPGAGAVSAAGPPGAAGPGPGQLCCLREDGERCGRAAGNASFSKRIQKSIS 94
Query: 122 RRDVEAHLDRGDR 84
++ V+ LD+ R
Sbjct: 95 QKKVKIELDKSAR 107
>EF623992-1|ABR25252.1| 354|Homo sapiens Uba6-specific E2
conjugating enzyme 1 protein.
Length = 354
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/44 (38%), Positives = 21/44 (47%)
Frame = -2
Query: 314 DIWFMHYGRAAGGAKLPSAGYA*TPLRPKPA*PNPARICSLWSP 183
D+W AAGGA P +G A P P A + A + S W P
Sbjct: 44 DVWAA--AAAAGGAGGPGSGLAPLPGLPPSAAAHGAALLSHWDP 85
>Y09723-1|CAA70889.1| 803|Homo sapiens Miz-1 protein protein.
Length = 803
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 243 ASKAEASLAESGKDMLTVEPRESGGSKQ 160
A++AEA+L+ES + + VEP G +Q
Sbjct: 207 AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>BC126163-1|AAI26164.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 243 ASKAEASLAESGKDMLTVEPRESGGSKQ 160
A++AEA+L+ES + + VEP G +Q
Sbjct: 207 AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>BC117276-1|AAI17277.1| 420|Homo sapiens reticulon 4 receptor-like
2 protein.
Length = 420
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 11 PRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGS 190
P + LY DL + D+R ++ D+ D G + E + C PPDSRG
Sbjct: 341 PADPSTLYRDLPAEDSRGRQGGDAPTEDDYWGGYGGEDQ-RGEQMCPGAACQAPPDSRGP 399
Query: 191 TVSISLP 211
+S LP
Sbjct: 400 ALSAGLP 406
>BC113673-1|AAI13674.1| 420|Homo sapiens reticulon 4 receptor-like
2 protein.
Length = 420
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 11 PRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGS 190
P + LY DL + D+R ++ D+ D G + E + C PPDSRG
Sbjct: 341 PADPSTLYRDLPAEDSRGRQGGDAPTEDDYWGGYGGEDQ-RGEQMCPGAACQAPPDSRGP 399
Query: 191 TVSISLP 211
+S LP
Sbjct: 400 ALSAGLP 406
>AY250221-1|AAP82838.1| 420|Homo sapiens nogo receptor-like 3
protein.
Length = 420
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 11 PRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGS 190
P + LY DL + D+R ++ D+ D G + E + C PPDSRG
Sbjct: 341 PADPSTLYRDLPAEDSRGRQGGDAPTEDDYWGGYGGEDQ-RGEQMCPGAACQAPPDSRGP 399
Query: 191 TVSISLP 211
+S LP
Sbjct: 400 ALSAGLP 406
>AL034555-3|CAB85445.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 protein.
Length = 803
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 243 ASKAEASLAESGKDMLTVEPRESGGSKQ 160
A++AEA+L+ES + + VEP G +Q
Sbjct: 207 AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AK223618-1|BAD97338.1| 803|Homo sapiens zinc finger and BTB domain
containing 17 variant protein.
Length = 803
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = -1
Query: 243 ASKAEASLAESGKDMLTVEPRESGGSKQ 160
A++AEA+L+ES + + VEP G +Q
Sbjct: 207 AAEAEAALSESSEQEMEVEPARKGEEEQ 234
>AF532858-1|AAP21835.1| 420|Homo sapiens Nogo-66 receptor homolog-1
protein.
Length = 420
Score = 27.9 bits (59), Expect = 9.8
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 11 PRHRTELYPDLRSRDARVKKKTDSIDLRDPNGLRRRVSRFECETRLVKSHCLEPPDSRGS 190
P + LY DL + D+R ++ D+ D G + E + C PPDSRG
Sbjct: 341 PADPSTLYRDLPAEDSRGRQGGDAPTEDDYWGGYGGEDQ-RGEQMCPGAACQAPPDSRGP 399
Query: 191 TVSISLP 211
+S LP
Sbjct: 400 ALSAGLP 406
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,899,219
Number of Sequences: 237096
Number of extensions: 1082602
Number of successful extensions: 3110
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2961
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3110
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2133208582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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