Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbVm0054
         (759 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant r...    27   0.83 
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   4.4  
AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprol...    24   5.9  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           24   5.9  
AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.    23   7.7  
AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse t...    23   7.7  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   7.7  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   7.7  

>AY062432-1|AAL47188.1|  391|Anopheles gambiae putative odorant
           receptor Or5 protein.
          Length = 391

 Score = 26.6 bits (56), Expect = 0.83
 Identities = 13/24 (54%), Positives = 16/24 (66%)
 Frame = +2

Query: 518 ISAGARCFVPSVQSGDVAETSSPF 589
           ISAG  CFV   Q G++A+TS  F
Sbjct: 360 ISAGKFCFVDIEQFGNMAKTSYSF 383


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 618 VLEPDHAGVLNGDDVSATSPLCTLG 544
           +++PD  GV+NG+++    P  + G
Sbjct: 413 MVQPDFYGVVNGEEIQVILPQASEG 437


>AJ439398-7|CAD28130.1| 1344|Anopheles gambiae putative 5-oxoprolinase
            protein.
          Length = 1344

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 10/18 (55%), Positives = 14/18 (77%), Gaps = 1/18 (5%)
 Frame = -1

Query: 630  PPGSVLEP-DHAGVLNGD 580
            PPGS+L+P D A V+ G+
Sbjct: 1092 PPGSILDPSDGAAVVGGN 1109


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -3

Query: 253 DEAFGYLKRVIVTPAVYPRLLEFLHV-DIQSTGQKSHC 143
           D +F  L RV  TPA  P  +EFL + D      + HC
Sbjct: 635 DASFNRLTRV--TPATIPNSIEFLFLNDNHIVHVEPHC 670


>AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.
          Length = 56

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
 Frame = +2

Query: 605 SGSRTLP----GGEFDWGGTSVKE 664
           +G+RT+P    GG F  GGT +K+
Sbjct: 21  TGARTVPRVFIGGNFVGGGTDIKK 44


>AJ970251-1|CAI96723.1|  131|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 131

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = -3

Query: 286 SLIHSCASLISDEAFGYLKRVIVT 215
           SL++ C SLIS    G+  R  VT
Sbjct: 22  SLLNCCRSLISTRQHGFFPRRSVT 45


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 651 VPPQSNSPPGSVLEPD 604
           +PP SNS P S   PD
Sbjct: 868 MPPSSNSSPSSYPSPD 883


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -1

Query: 60  PLNGGRTESCRSRTKRNR 7
           P +GGR  SCRS   R R
Sbjct: 262 PRSGGRWPSCRSPPARRR 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 792,288
Number of Sequences: 2352
Number of extensions: 16657
Number of successful extensions: 40
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)