Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbVm0054
(759 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein. 24 1.8
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 5.4
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 5.4
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 5.4
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 5.4
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 22 7.2
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 22 7.2
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 22 7.2
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 9.5
>AY703685-1|AAU12681.1| 200|Apis mellifera abdominal-A protein.
Length = 200
Score = 23.8 bits (49), Expect = 1.8
Identities = 11/44 (25%), Positives = 20/44 (45%)
Frame = -1
Query: 726 CPFAPREVSVLAELALGHLRYSLTDVPPQSNSPPGSVLEPDHAG 595
C +P S+ + L+ + + + Q NSP + P H+G
Sbjct: 30 CTTSPATASLESSLSAAAVAAAAVNYAQQHNSPSPTGSSPQHSG 73
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +2
Query: 446 SSLKNHYFHCFITYSVGRK 502
SS +FHC+ GRK
Sbjct: 420 SSFFQQFFHCYCPVRFGRK 438
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 45 RTESCRSRTKRNRHD 1
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 45 RTESCRSRTKRNRHD 1
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 45 RTESCRSRTKRNRHD 1
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 45 RTESCRSRTKRNRHD 1
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 45 RTESCRSRTKRNRHD 1
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 45 RTESCRSRTKRNRHD 1
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 22.2 bits (45), Expect = 5.4
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = -1
Query: 45 RTESCRSRTKRNRHD 1
RT SC SR + +RH+
Sbjct: 226 RTSSCHSRYEDSRHE 240
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 425 VGDRFARSSLKNHYFHCFI 481
+ + A L+N Y+ CFI
Sbjct: 32 IDEILANDRLRNQYYDCFI 50
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 425 VGDRFARSSLKNHYFHCFI 481
+ + A L+N Y+ CFI
Sbjct: 32 IDEILANDRLRNQYYDCFI 50
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 21.8 bits (44), Expect = 7.2
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 453 SDDRAKRSPTYATPLMSPYNARLESSSTGSSFPADSP 343
+D R SP TP+ + Y +E+ + S F D+P
Sbjct: 21 NDKRIYLSPR--TPIKNVYKNNIETKNQLSPFNIDTP 55
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -1
Query: 420 ATPLMSPYNARLESSSTGSSFP 355
A + SP + SSTGSS P
Sbjct: 347 AKQMASPEPPKSSESSTGSSIP 368
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,566
Number of Sequences: 438
Number of extensions: 4884
Number of successful extensions: 16
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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